EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005041 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-21k16.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7737 bases
Position: chrNHOQ01001000.1:1597995-1605731
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007414	G-patch	PF01585.23	6.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007493	-	3392	-	ENSGAFP00000007414	526 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005041	si:ch73-21k16.4	97	53.947	ENSG00000092978	GPATCH2	94	52.820	Homo_sapiens
ENSGAFG00000005041	si:ch73-21k16.4	97	53.558	ENSAMEG00000000532	GPATCH2	94	52.622	Ailuropoda_melanoleuca
ENSGAFG00000005041	si:ch73-21k16.4	100	79.057	ENSACIG00000017628	si:ch73-21k16.4	100	79.057	Amphilophus_citrinellus
ENSGAFG00000005041	si:ch73-21k16.4	96	77.515	ENSAOCG00000020838	si:ch73-21k16.4	100	76.529	Amphiprion_ocellaris
ENSGAFG00000005041	si:ch73-21k16.4	100	84.906	ENSAPEG00000007324	si:ch73-21k16.4	100	84.906	Amphiprion_percula
ENSGAFG00000005041	si:ch73-21k16.4	100	76.806	ENSATEG00000003701	si:ch73-21k16.4	100	76.806	Anabas_testudineus
ENSGAFG00000005041	si:ch73-21k16.4	97	55.725	ENSAPLG00000005559	GPATCH2	99	54.667	Anas_platyrhynchos
ENSGAFG00000005041	si:ch73-21k16.4	97	55.472	ENSACAG00000014945	GPATCH2	92	54.426	Anolis_carolinensis
ENSGAFG00000005041	si:ch73-21k16.4	97	54.253	ENSANAG00000032851	GPATCH2	95	53.119	Aotus_nancymaae
ENSGAFG00000005041	si:ch73-21k16.4	100	84.877	ENSACLG00000008706	si:ch73-21k16.4	100	84.877	Astatotilapia_calliptera
ENSGAFG00000005041	si:ch73-21k16.4	100	68.679	ENSAMXG00000001662	si:ch73-21k16.4	100	68.679	Astyanax_mexicanus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.291	ENSBTAG00000001574	GPATCH2	94	53.296	Bos_taurus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSCJAG00000047537	GPATCH2	86	53.008	Callithrix_jacchus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSCAFG00000010781	GPATCH2	94	53.008	Canis_familiaris
ENSGAFG00000005041	si:ch73-21k16.4	97	54.545	ENSCHIG00000018042	GPATCH2	94	53.558	Capra_hircus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.183	ENSCAPG00000007843	GPATCH2	96	53.042	Cavia_aperea
ENSGAFG00000005041	si:ch73-21k16.4	97	53.947	ENSCPOG00000003966	GPATCH2	94	53.008	Cavia_porcellus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSCCAG00000010195	GPATCH2	94	53.195	Cebus_capucinus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.598	ENSCATG00000038238	GPATCH2	93	53.448	Cercocebus_atys
ENSGAFG00000005041	si:ch73-21k16.4	99	53.775	ENSCLAG00000009274	GPATCH2	94	53.788	Chinchilla_lanigera
ENSGAFG00000005041	si:ch73-21k16.4	97	55.703	ENSCPBG00000013037	GPATCH2	96	54.563	Chrysemys_picta_bellii
ENSGAFG00000005041	si:ch73-21k16.4	98	53.259	ENSCANG00000031261	GPATCH2	95	52.142	Colobus_angolensis_palliatus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.426	ENSCGRG00001024577	Gpatch2	94	53.195	Cricetulus_griseus_chok1gshd
ENSGAFG00000005041	si:ch73-21k16.4	97	54.426	ENSCGRG00000015039	Gpatch2	96	53.308	Cricetulus_griseus_crigri
ENSGAFG00000005041	si:ch73-21k16.4	100	81.921	ENSCSEG00000002545	si:ch73-21k16.4	100	82.863	Cynoglossus_semilaevis
ENSGAFG00000005041	si:ch73-21k16.4	100	93.726	ENSCVAG00000006306	si:ch73-21k16.4	100	93.726	Cyprinodon_variegatus
ENSGAFG00000005041	si:ch73-21k16.4	100	67.797	ENSDARG00000101260	GPATCH2	100	67.797	Danio_rerio
ENSGAFG00000005041	si:ch73-21k16.4	97	54.563	ENSDORG00000030155	Gpatch2	96	53.422	Dipodomys_ordii
ENSGAFG00000005041	si:ch73-21k16.4	97	50.943	ENSETEG00000012316	GPATCH2	94	50.377	Echinops_telfairi
ENSGAFG00000005041	si:ch73-21k16.4	78	39.911	ENSEBUG00000014275	si:ch73-21k16.4	77	40.576	Eptatretus_burgeri
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSEASG00005003507	GPATCH2	94	53.383	Equus_asinus_asinus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSECAG00000013263	GPATCH2	94	53.383	Equus_caballus
ENSGAFG00000005041	si:ch73-21k16.4	97	51.985	ENSEEUG00000008748	GPATCH2	96	51.985	Erinaceus_europaeus
ENSGAFG00000005041	si:ch73-21k16.4	100	74.528	ENSELUG00000004934	si:ch73-21k16.4	100	74.528	Esox_lucius
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSFCAG00000007129	GPATCH2	94	53.195	Felis_catus
ENSGAFG00000005041	si:ch73-21k16.4	97	55.009	ENSFALG00000012223	GPATCH2	96	53.875	Ficedula_albicollis
ENSGAFG00000005041	si:ch73-21k16.4	96	53.346	ENSFDAG00000011026	GPATCH2	96	52.199	Fukomys_damarensis
ENSGAFG00000005041	si:ch73-21k16.4	80	91.275	ENSFHEG00000008699	si:ch73-21k16.4	92	94.631	Fundulus_heteroclitus
ENSGAFG00000005041	si:ch73-21k16.4	81	87.597	ENSGMOG00000001595	si:ch73-21k16.4	82	87.597	Gadus_morhua
ENSGAFG00000005041	si:ch73-21k16.4	97	55.977	ENSGALG00000009627	GPATCH2	96	54.924	Gallus_gallus
ENSGAFG00000005041	si:ch73-21k16.4	99	81.733	ENSGACG00000013427	si:ch73-21k16.4	100	81.733	Gasterosteus_aculeatus
ENSGAFG00000005041	si:ch73-21k16.4	97	55.323	ENSGAGG00000013122	GPATCH2	96	54.183	Gopherus_agassizii
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSGGOG00000009440	GPATCH2	94	53.008	Gorilla_gorilla
ENSGAFG00000005041	si:ch73-21k16.4	100	84.877	ENSHBUG00000014399	si:ch73-21k16.4	100	84.877	Haplochromis_burtoni
ENSGAFG00000005041	si:ch73-21k16.4	97	53.383	ENSHGLG00000019513	GPATCH2	94	52.256	Heterocephalus_glaber_female
ENSGAFG00000005041	si:ch73-21k16.4	97	53.383	ENSHGLG00100003689	GPATCH2	94	52.256	Heterocephalus_glaber_male
ENSGAFG00000005041	si:ch73-21k16.4	100	67.362	ENSHCOG00000011331	si:ch73-21k16.4	100	67.552	Hippocampus_comes
ENSGAFG00000005041	si:ch73-21k16.4	100	55.431	ENSIPUG00000012840	si:ch73-21k16.4	100	55.431	Ictalurus_punctatus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSSTOG00000024959	GPATCH2	94	53.195	Ictidomys_tridecemlineatus
ENSGAFG00000005041	si:ch73-21k16.4	98	52.612	ENSJJAG00000019244	Gpatch2	94	51.866	Jaculus_jaculus
ENSGAFG00000005041	si:ch73-21k16.4	100	84.310	ENSLBEG00000008187	si:ch73-21k16.4	100	84.310	Labrus_bergylta
ENSGAFG00000005041	si:ch73-21k16.4	97	57.905	ENSLACG00000013951	GPATCH2	97	57.605	Latimeria_chalumnae
ENSGAFG00000005041	si:ch73-21k16.4	100	58.932	ENSLOCG00000016058	si:ch73-21k16.4	100	59.300	Lepisosteus_oculatus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.237	ENSLAFG00000003787	GPATCH2	97	53.107	Loxodonta_africana
ENSGAFG00000005041	si:ch73-21k16.4	98	53.631	ENSMFAG00000000617	GPATCH2	94	53.008	Macaca_fascicularis
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSMMUG00000014946	GPATCH2	94	53.008	Macaca_mulatta
ENSGAFG00000005041	si:ch73-21k16.4	97	54.167	ENSMNEG00000034969	GPATCH2	96	53.030	Macaca_nemestrina
ENSGAFG00000005041	si:ch73-21k16.4	98	53.631	ENSMLEG00000032285	GPATCH2	95	52.514	Mandrillus_leucophaeus
ENSGAFG00000005041	si:ch73-21k16.4	100	85.094	ENSMAMG00000015684	si:ch73-21k16.4	100	85.094	Mastacembelus_armatus
ENSGAFG00000005041	si:ch73-21k16.4	100	84.877	ENSMZEG00005015040	si:ch73-21k16.4	100	84.877	Maylandia_zebra
ENSGAFG00000005041	si:ch73-21k16.4	56	58.170	ENSMGAG00000009428	GPATCH2	93	58.730	Meleagris_gallopavo
ENSGAFG00000005041	si:ch73-21k16.4	97	54.356	ENSMAUG00000004851	Gpatch2	94	53.220	Mesocricetus_auratus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSMICG00000037090	GPATCH2	94	53.008	Microcebus_murinus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.820	ENSMOCG00000020821	Gpatch2	93	53.571	Microtus_ochrogaster
ENSGAFG00000005041	si:ch73-21k16.4	100	73.271	ENSMMOG00000015329	si:ch73-21k16.4	100	73.458	Mola_mola
ENSGAFG00000005041	si:ch73-21k16.4	99	53.114	ENSMODG00000004195	GPATCH2	93	51.737	Monodelphis_domestica
ENSGAFG00000005041	si:ch73-21k16.4	100	79.087	ENSMALG00000016801	si:ch73-21k16.4	100	79.087	Monopterus_albus
ENSGAFG00000005041	si:ch73-21k16.4	97	53.947	MGP_CAROLIEiJ_G0015030	Gpatch2	96	52.390	Mus_caroli
ENSGAFG00000005041	si:ch73-21k16.4	97	53.008	ENSMUSG00000039210	Gpatch2	96	51.434	Mus_musculus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.190	MGP_PahariEiJ_G0028262	Gpatch2	96	53.042	Mus_pahari
ENSGAFG00000005041	si:ch73-21k16.4	97	53.195	MGP_SPRETEiJ_G0015830	Gpatch2	96	51.625	Mus_spretus
ENSGAFG00000005041	si:ch73-21k16.4	99	53.455	ENSMPUG00000004269	GPATCH2	94	53.271	Mustela_putorius_furo
ENSGAFG00000005041	si:ch73-21k16.4	97	53.759	ENSNGAG00000002207	Gpatch2	94	52.820	Nannospalax_galili
ENSGAFG00000005041	si:ch73-21k16.4	100	76.046	ENSNBRG00000020932	si:ch73-21k16.4	100	76.046	Neolamprologus_brichardi
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSNLEG00000014201	GPATCH2	95	52.975	Nomascus_leucogenys
ENSGAFG00000005041	si:ch73-21k16.4	96	49.810	ENSMEUG00000012239	GPATCH2	96	48.669	Notamacropus_eugenii
ENSGAFG00000005041	si:ch73-21k16.4	97	51.880	ENSOPRG00000010126	GPATCH2	94	50.469	Ochotona_princeps
ENSGAFG00000005041	si:ch73-21k16.4	98	53.645	ENSODEG00000014927	GPATCH2	94	52.523	Octodon_degus
ENSGAFG00000005041	si:ch73-21k16.4	100	84.877	ENSONIG00000000570	si:ch73-21k16.4	100	84.877	Oreochromis_niloticus
ENSGAFG00000005041	si:ch73-21k16.4	96	51.167	ENSOANG00000008549	GPATCH2	97	50.808	Ornithorhynchus_anatinus
ENSGAFG00000005041	si:ch73-21k16.4	97	53.947	ENSOCUG00000014512	GPATCH2	94	52.632	Oryctolagus_cuniculus
ENSGAFG00000005041	si:ch73-21k16.4	100	85.094	ENSORLG00000016810	si:ch73-21k16.4	100	85.094	Oryzias_latipes
ENSGAFG00000005041	si:ch73-21k16.4	100	85.633	ENSORLG00020003127	si:ch73-21k16.4	100	85.633	Oryzias_latipes_hni
ENSGAFG00000005041	si:ch73-21k16.4	100	84.717	ENSORLG00015022304	si:ch73-21k16.4	100	84.717	Oryzias_latipes_hsok
ENSGAFG00000005041	si:ch73-21k16.4	100	86.200	ENSOMEG00000017809	si:ch73-21k16.4	100	87.179	Oryzias_melastigma
ENSGAFG00000005041	si:ch73-21k16.4	97	55.075	ENSOGAG00000004485	GPATCH2	94	53.947	Otolemur_garnettii
ENSGAFG00000005041	si:ch73-21k16.4	97	55.243	ENSOARG00000011440	GPATCH2	94	54.120	Ovis_aries
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSPPAG00000038887	GPATCH2	94	53.008	Pan_paniscus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.682	ENSPPRG00000013363	GPATCH2	94	53.558	Panthera_pardus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.135	ENSPTRG00000001986	GPATCH2	94	53.008	Pan_troglodytes
ENSGAFG00000005041	si:ch73-21k16.4	98	53.445	ENSPANG00000020943	GPATCH2	95	52.142	Papio_anubis
ENSGAFG00000005041	si:ch73-21k16.4	100	65.922	ENSPKIG00000004245	si:ch73-21k16.4	100	65.922	Paramormyrops_kingsleyae
ENSGAFG00000005041	si:ch73-21k16.4	97	56.167	ENSPSIG00000005373	GPATCH2	96	55.028	Pelodiscus_sinensis
ENSGAFG00000005041	si:ch73-21k16.4	100	73.346	ENSPMGG00000000611	si:ch73-21k16.4	100	73.346	Periophthalmus_magnuspinnatus
ENSGAFG00000005041	si:ch73-21k16.4	97	53.977	ENSPEMG00000018364	Gpatch2	95	53.030	Peromyscus_maniculatus_bairdii
ENSGAFG00000005041	si:ch73-21k16.4	99	54.029	ENSPCIG00000027888	GPATCH2	97	52.834	Phascolarctos_cinereus
ENSGAFG00000005041	si:ch73-21k16.4	100	96.768	ENSPFOG00000008062	si:ch73-21k16.4	100	96.768	Poecilia_formosa
ENSGAFG00000005041	si:ch73-21k16.4	100	96.958	ENSPLAG00000022219	si:ch73-21k16.4	100	96.958	Poecilia_latipinna
ENSGAFG00000005041	si:ch73-21k16.4	100	97.148	ENSPMEG00000010687	si:ch73-21k16.4	100	97.421	Poecilia_mexicana
ENSGAFG00000005041	si:ch73-21k16.4	99	91.115	ENSPREG00000011915	si:ch73-21k16.4	98	91.115	Poecilia_reticulata
ENSGAFG00000005041	si:ch73-21k16.4	97	49.624	ENSPPYG00000000216	GPATCH2	93	48.496	Pongo_abelii
ENSGAFG00000005041	si:ch73-21k16.4	97	44.023	ENSPCAG00000013998	GPATCH2	99	44.129	Procavia_capensis
ENSGAFG00000005041	si:ch73-21k16.4	97	53.832	ENSPVAG00000010649	GPATCH2	94	52.897	Pteropus_vampyrus
ENSGAFG00000005041	si:ch73-21k16.4	100	84.877	ENSPNYG00000014144	si:ch73-21k16.4	100	84.877	Pundamilia_nyererei
ENSGAFG00000005041	si:ch73-21k16.4	98	53.445	ENSRROG00000012833	GPATCH2	95	52.328	Rhinopithecus_roxellana
ENSGAFG00000005041	si:ch73-21k16.4	97	53.759	ENSSBOG00000028891	GPATCH2	96	51.992	Saimiri_boliviensis_boliviensis
ENSGAFG00000005041	si:ch73-21k16.4	96	52.953	ENSSHAG00000015123	GPATCH2	95	51.772	Sarcophilus_harrisii
ENSGAFG00000005041	si:ch73-21k16.4	100	64.366	ENSSFOG00015000674	gpatch2	100	64.179	Scleropages_formosus
ENSGAFG00000005041	si:ch73-21k16.4	100	85.094	ENSSMAG00000009585	si:ch73-21k16.4	100	85.472	Scophthalmus_maximus
ENSGAFG00000005041	si:ch73-21k16.4	100	87.335	ENSSDUG00000011998	si:ch73-21k16.4	100	87.335	Seriola_dumerili
ENSGAFG00000005041	si:ch73-21k16.4	100	87.524	ENSSLDG00000025385	si:ch73-21k16.4	100	87.524	Seriola_lalandi_dorsalis
ENSGAFG00000005041	si:ch73-21k16.4	97	54.167	ENSSARG00000013063	GPATCH2	96	53.220	Sorex_araneus
ENSGAFG00000005041	si:ch73-21k16.4	100	88.091	ENSSPAG00000023569	si:ch73-21k16.4	100	88.091	Stegastes_partitus
ENSGAFG00000005041	si:ch73-21k16.4	97	54.699	ENSSSCG00000027207	GPATCH2	94	53.759	Sus_scrofa
ENSGAFG00000005041	si:ch73-21k16.4	100	83.208	ENSTRUG00000015569	si:ch73-21k16.4	100	83.208	Takifugu_rubripes
ENSGAFG00000005041	si:ch73-21k16.4	97	80.814	ENSTNIG00000016304	si:ch73-21k16.4	96	81.589	Tetraodon_nigroviridis
ENSGAFG00000005041	si:ch73-21k16.4	79	85.714	ENSTTRG00000003739	GPATCH2	76	85.714	Tursiops_truncatus
ENSGAFG00000005041	si:ch73-21k16.4	97	53.832	ENSUMAG00000020588	GPATCH2	96	52.662	Ursus_maritimus
ENSGAFG00000005041	si:ch73-21k16.4	97	53.759	ENSVPAG00000005192	GPATCH2	94	52.632	Vicugna_pacos
ENSGAFG00000005041	si:ch73-21k16.4	97	54.323	ENSVVUG00000012998	GPATCH2	94	53.008	Vulpes_vulpes
ENSGAFG00000005041	si:ch73-21k16.4	98	54.713	ENSXETG00000021194	gpatch2	96	53.789	Xenopus_tropicalis
ENSGAFG00000005041	si:ch73-21k16.4	100	92.205	ENSXCOG00000007145	si:ch73-21k16.4	100	92.205	Xiphophorus_couchianus
ENSGAFG00000005041	si:ch73-21k16.4	100	96.958	ENSXMAG00000004679	si:ch73-21k16.4	100	96.958	Xiphophorus_maculatus