EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005050 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5330 bases
Position: chrNHOQ01001539.1:108478-113807
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007437	MMR_HSR1	PF01926.23	5.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007516	-	765	-	ENSGAFP00000007437	254 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005050	-	72	38.095	ENSGAFG00000018470	-	73	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005050	-	87	56.195	ENSAPOG00000006213	-	77	56.195	Acanthochromis_polyacanthus
ENSGAFG00000005050	-	89	60.000	ENSACIG00000023712	-	59	60.000	Amphilophus_citrinellus
ENSGAFG00000005050	-	80	60.784	ENSACIG00000014950	-	88	60.784	Amphilophus_citrinellus
ENSGAFG00000005050	-	93	33.468	ENSATEG00000008595	-	85	33.468	Anabas_testudineus
ENSGAFG00000005050	-	77	39.801	ENSACLG00000023033	-	51	39.801	Astatotilapia_calliptera
ENSGAFG00000005050	-	92	59.167	ENSACLG00000015361	-	59	59.167	Astatotilapia_calliptera
ENSGAFG00000005050	-	89	44.240	ENSAMXG00000030535	-	62	44.240	Astyanax_mexicanus
ENSGAFG00000005050	-	87	54.487	ENSCVAG00000007794	-	51	54.487	Cyprinodon_variegatus
ENSGAFG00000005050	-	84	61.009	ENSCVAG00000022669	-	77	61.009	Cyprinodon_variegatus
ENSGAFG00000005050	-	77	60.500	ENSCVAG00000014791	-	54	60.500	Cyprinodon_variegatus
ENSGAFG00000005050	-	84	58.371	ENSCVAG00000022676	-	65	58.371	Cyprinodon_variegatus
ENSGAFG00000005050	-	84	46.637	ENSDARG00000076398	si:dkey-201l21.4	55	46.637	Danio_rerio
ENSGAFG00000005050	-	92	42.623	ENSDARG00000039888	CR855393.1	68	42.623	Danio_rerio
ENSGAFG00000005050	-	95	45.020	ENSDARG00000100858	zgc:171695	59	45.020	Danio_rerio
ENSGAFG00000005050	-	85	50.877	ENSELUG00000022148	-	52	50.877	Esox_lucius
ENSGAFG00000005050	-	77	46.000	ENSELUG00000008413	-	54	45.000	Esox_lucius
ENSGAFG00000005050	-	85	57.399	ENSFHEG00000002160	-	74	56.034	Fundulus_heteroclitus
ENSGAFG00000005050	-	60	39.623	ENSGMOG00000020059	-	78	39.623	Gadus_morhua
ENSGAFG00000005050	-	72	37.766	ENSGMOG00000008232	-	56	38.220	Gadus_morhua
ENSGAFG00000005050	-	58	33.117	ENSGMOG00000020208	-	85	33.117	Gadus_morhua
ENSGAFG00000005050	-	67	35.593	ENSGMOG00000019786	-	87	35.593	Gadus_morhua
ENSGAFG00000005050	-	89	58.696	ENSGACG00000015437	-	58	58.696	Gasterosteus_aculeatus
ENSGAFG00000005050	-	91	58.650	ENSGACG00000005035	-	59	58.650	Gasterosteus_aculeatus
ENSGAFG00000005050	-	59	43.226	ENSGACG00000015787	-	71	43.226	Gasterosteus_aculeatus
ENSGAFG00000005050	-	79	61.463	ENSHBUG00000023729	-	54	61.463	Haplochromis_burtoni
ENSGAFG00000005050	-	94	60.400	ENSHBUG00000007413	-	99	60.400	Haplochromis_burtoni
ENSGAFG00000005050	-	88	37.281	ENSIPUG00000000082	-	97	37.281	Ictalurus_punctatus
ENSGAFG00000005050	-	89	45.570	ENSIPUG00000009201	-	92	45.570	Ictalurus_punctatus
ENSGAFG00000005050	-	89	44.783	ENSIPUG00000013512	-	57	44.783	Ictalurus_punctatus
ENSGAFG00000005050	-	85	39.556	ENSLBEG00000012781	-	85	39.556	Labrus_bergylta
ENSGAFG00000005050	-	85	50.459	ENSLBEG00000019795	-	92	50.459	Labrus_bergylta
ENSGAFG00000005050	-	74	39.691	ENSLBEG00000028432	-	73	39.691	Labrus_bergylta
ENSGAFG00000005050	-	83	38.009	ENSLOCG00000017620	-	63	38.009	Lepisosteus_oculatus
ENSGAFG00000005050	-	74	39.791	ENSMAMG00000015204	-	76	39.791	Mastacembelus_armatus
ENSGAFG00000005050	-	87	60.177	ENSMZEG00005004397	-	78	60.177	Maylandia_zebra
ENSGAFG00000005050	-	95	55.967	ENSMZEG00005009576	-	54	55.967	Maylandia_zebra
ENSGAFG00000005050	-	79	61.463	ENSMZEG00005023309	-	54	61.463	Maylandia_zebra
ENSGAFG00000005050	-	82	65.258	ENSMZEG00005023315	-	54	65.258	Maylandia_zebra
ENSGAFG00000005050	-	85	58.333	ENSMMOG00000015162	-	88	58.333	Mola_mola
ENSGAFG00000005050	-	87	58.667	ENSMMOG00000011295	-	81	58.667	Mola_mola
ENSGAFG00000005050	-	95	58.233	ENSNBRG00000006565	-	77	58.233	Neolamprologus_brichardi
ENSGAFG00000005050	-	91	53.527	ENSONIG00000013895	-	96	53.527	Oreochromis_niloticus
ENSGAFG00000005050	-	94	49.388	ENSONIG00000013617	-	57	49.388	Oreochromis_niloticus
ENSGAFG00000005050	-	87	60.811	ENSONIG00000017927	-	67	60.811	Oreochromis_niloticus
ENSGAFG00000005050	-	88	49.153	ENSPMGG00000016798	-	57	49.153	Periophthalmus_magnuspinnatus
ENSGAFG00000005050	-	86	33.790	ENSPMGG00000016292	-	54	33.945	Periophthalmus_magnuspinnatus
ENSGAFG00000005050	-	83	54.667	ENSPMGG00000020583	-	53	54.667	Periophthalmus_magnuspinnatus
ENSGAFG00000005050	-	85	51.092	ENSPMGG00000002690	-	62	51.092	Periophthalmus_magnuspinnatus
ENSGAFG00000005050	-	76	50.000	ENSPMGG00000008676	-	55	50.000	Periophthalmus_magnuspinnatus
ENSGAFG00000005050	-	87	52.018	ENSPFOG00000023267	-	50	52.018	Poecilia_formosa
ENSGAFG00000005050	-	89	58.723	ENSPLAG00000019926	-	84	58.723	Poecilia_latipinna
ENSGAFG00000005050	-	91	57.627	ENSPREG00000007255	-	56	57.627	Poecilia_reticulata
ENSGAFG00000005050	-	76	39.196	ENSPNYG00000016575	-	67	39.196	Pundamilia_nyererei
ENSGAFG00000005050	-	75	32.821	ENSPNAG00000011130	-	65	32.821	Pygocentrus_nattereri
ENSGAFG00000005050	-	87	37.662	ENSSDUG00000000316	-	95	37.662	Seriola_dumerili
ENSGAFG00000005050	-	91	34.454	ENSSDUG00000005919	-	80	34.454	Seriola_dumerili
ENSGAFG00000005050	-	80	60.287	ENSSDUG00000021349	-	90	60.287	Seriola_dumerili
ENSGAFG00000005050	-	87	37.826	ENSSDUG00000000370	-	90	37.826	Seriola_dumerili
ENSGAFG00000005050	-	90	54.936	ENSSLDG00000018054	-	95	54.936	Seriola_lalandi_dorsalis
ENSGAFG00000005050	-	74	40.513	ENSSLDG00000017661	-	84	40.513	Seriola_lalandi_dorsalis
ENSGAFG00000005050	-	82	38.140	ENSSPAG00000003300	-	84	38.140	Stegastes_partitus
ENSGAFG00000005050	-	91	54.098	ENSSPAG00000000948	-	50	54.098	Stegastes_partitus
ENSGAFG00000005050	-	84	56.364	ENSSPAG00000015996	-	83	56.364	Stegastes_partitus
ENSGAFG00000005050	-	86	53.604	ENSTRUG00000017314	-	94	53.604	Takifugu_rubripes
ENSGAFG00000005050	-	90	54.701	ENSTRUG00000001460	-	72	54.701	Takifugu_rubripes
ENSGAFG00000005050	-	85	55.455	ENSTRUG00000021059	-	82	55.455	Takifugu_rubripes
ENSGAFG00000005050	-	89	50.431	ENSTNIG00000003332	-	59	50.431	Tetraodon_nigroviridis
ENSGAFG00000005050	-	89	50.000	ENSTNIG00000005878	-	61	50.000	Tetraodon_nigroviridis
ENSGAFG00000005050	-	89	54.978	ENSTNIG00000006523	-	58	54.978	Tetraodon_nigroviridis
ENSGAFG00000005050	-	85	59.091	ENSXCOG00000001022	-	56	58.515	Xiphophorus_couchianus