EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005111 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8107 bases
Position: chrNHOQ01002523.1:910533-918639
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007504	tRNA_int_end_N2	PF12928.7	3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007583	-	1982	-	ENSGAFP00000007504	496 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005111	tsen54	99	46.604	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSGAFG00000005111	tsen54	100	71.513	ENSAPOG00000009659	tsen54	100	70.000	Acanthochromis_polyacanthus
ENSGAFG00000005111	tsen54	95	46.850	ENSAMEG00000009414	TSEN54	96	46.457	Ailuropoda_melanoleuca
ENSGAFG00000005111	tsen54	100	71.513	ENSAOCG00000000152	tsen54	98	71.513	Amphiprion_ocellaris
ENSGAFG00000005111	tsen54	100	71.120	ENSAPEG00000018931	tsen54	98	71.120	Amphiprion_percula
ENSGAFG00000005111	tsen54	100	66.226	ENSATEG00000019860	tsen54	100	66.981	Anabas_testudineus
ENSGAFG00000005111	tsen54	85	47.577	ENSAPLG00000009419	TSEN54	99	46.916	Anas_platyrhynchos
ENSGAFG00000005111	tsen54	99	47.328	ENSACAG00000006714	TSEN54	99	47.519	Anolis_carolinensis
ENSGAFG00000005111	tsen54	96	46.693	ENSANAG00000024061	TSEN54	98	46.212	Aotus_nancymaae
ENSGAFG00000005111	tsen54	100	67.754	ENSACLG00000019800	tsen54	100	67.754	Astatotilapia_calliptera
ENSGAFG00000005111	tsen54	97	58.182	ENSAMXG00000006546	tsen54	97	58.384	Astyanax_mexicanus
ENSGAFG00000005111	tsen54	99	47.637	ENSBTAG00000000824	TSEN54	99	48.113	Bos_taurus
ENSGAFG00000005111	tsen54	96	46.408	ENSCJAG00000014278	TSEN54	98	46.388	Callithrix_jacchus
ENSGAFG00000005111	tsen54	99	47.004	ENSCAFG00000004798	TSEN54	99	46.981	Canis_familiaris
ENSGAFG00000005111	tsen54	99	47.004	ENSCAFG00020000312	TSEN54	99	46.981	Canis_lupus_dingo
ENSGAFG00000005111	tsen54	99	47.692	ENSCHIG00000019908	TSEN54	99	47.692	Capra_hircus
ENSGAFG00000005111	tsen54	85	46.087	ENSTSYG00000037439	TSEN54	99	46.220	Carlito_syrichta
ENSGAFG00000005111	tsen54	96	46.967	ENSCCAG00000036624	TSEN54	98	46.110	Cebus_capucinus
ENSGAFG00000005111	tsen54	96	47.287	ENSCATG00000042877	TSEN54	98	46.110	Cercocebus_atys
ENSGAFG00000005111	tsen54	96	47.674	ENSCLAG00000002924	TSEN54	96	47.093	Chinchilla_lanigera
ENSGAFG00000005111	tsen54	99	46.415	ENSCSAG00000004809	TSEN54	99	46.053	Chlorocebus_sabaeus
ENSGAFG00000005111	tsen54	97	47.692	ENSCPBG00000028071	TSEN54	98	47.115	Chrysemys_picta_bellii
ENSGAFG00000005111	tsen54	99	45.794	ENSCANG00000028053	TSEN54	99	45.677	Colobus_angolensis_palliatus
ENSGAFG00000005111	tsen54	99	45.966	ENSCGRG00001020029	Tsen54	99	45.591	Cricetulus_griseus_chok1gshd
ENSGAFG00000005111	tsen54	83	44.889	ENSCGRG00000016289	Tsen54	99	44.444	Cricetulus_griseus_crigri
ENSGAFG00000005111	tsen54	80	55.556	ENSCSEG00000020586	tsen54	99	55.072	Cynoglossus_semilaevis
ENSGAFG00000005111	tsen54	80	55.941	ENSDARG00000036844	tsen54	100	56.436	Danio_rerio
ENSGAFG00000005111	tsen54	99	45.489	ENSDNOG00000018452	TSEN54	99	46.667	Dasypus_novemcinctus
ENSGAFG00000005111	tsen54	99	46.679	ENSDORG00000004073	Tsen54	99	46.355	Dipodomys_ordii
ENSGAFG00000005111	tsen54	95	33.712	ENSEBUG00000005203	TSEN54	94	33.524	Eptatretus_burgeri
ENSGAFG00000005111	tsen54	99	47.429	ENSEASG00005000579	TSEN54	99	47.048	Equus_asinus_asinus
ENSGAFG00000005111	tsen54	99	46.857	ENSECAG00000004924	TSEN54	99	46.476	Equus_caballus
ENSGAFG00000005111	tsen54	85	45.238	ENSEEUG00000008467	TSEN54	99	45.495	Erinaceus_europaeus
ENSGAFG00000005111	tsen54	99	57.807	ENSELUG00000017703	tsen54	92	58.550	Esox_lucius
ENSGAFG00000005111	tsen54	99	47.159	ENSFCAG00000023712	TSEN54	99	47.727	Felis_catus
ENSGAFG00000005111	tsen54	93	46.545	ENSFALG00000001119	TSEN54	92	47.239	Ficedula_albicollis
ENSGAFG00000005111	tsen54	85	48.026	ENSFDAG00000019090	TSEN54	99	48.465	Fukomys_damarensis
ENSGAFG00000005111	tsen54	100	81.225	ENSFHEG00000005470	tsen54	100	81.225	Fundulus_heteroclitus
ENSGAFG00000005111	tsen54	84	58.854	ENSGMOG00000013146	tsen54	99	58.854	Gadus_morhua
ENSGAFG00000005111	tsen54	96	43.495	ENSGALG00000047163	TSEN54	99	43.080	Gallus_gallus
ENSGAFG00000005111	tsen54	96	64.694	ENSGACG00000014987	tsen54	100	64.490	Gasterosteus_aculeatus
ENSGAFG00000005111	tsen54	97	49.419	ENSGAGG00000006825	TSEN54	96	49.419	Gopherus_agassizii
ENSGAFG00000005111	tsen54	95	47.151	ENSGGOG00000009417	TSEN54	99	46.771	Gorilla_gorilla
ENSGAFG00000005111	tsen54	90	66.454	ENSHBUG00000018296	tsen54	92	66.454	Haplochromis_burtoni
ENSGAFG00000005111	tsen54	99	47.753	ENSHGLG00000007979	TSEN54	99	47.378	Heterocephalus_glaber_female
ENSGAFG00000005111	tsen54	99	46.816	ENSHGLG00100005497	TSEN54	99	46.442	Heterocephalus_glaber_male
ENSGAFG00000005111	tsen54	80	63.971	ENSHCOG00000007481	tsen54	100	63.725	Hippocampus_comes
ENSGAFG00000005111	tsen54	98	51.866	ENSIPUG00000000590	tsen54	97	51.670	Ictalurus_punctatus
ENSGAFG00000005111	tsen54	96	46.899	ENSSTOG00000012883	TSEN54	97	46.899	Ictidomys_tridecemlineatus
ENSGAFG00000005111	tsen54	99	46.852	ENSJJAG00000007365	Tsen54	99	46.455	Jaculus_jaculus
ENSGAFG00000005111	tsen54	100	70.644	ENSKMAG00000006944	tsen54	100	70.644	Kryptolebias_marmoratus
ENSGAFG00000005111	tsen54	100	65.000	ENSLBEG00000004199	tsen54	100	65.192	Labrus_bergylta
ENSGAFG00000005111	tsen54	96	42.166	ENSLACG00000009497	TSEN54	99	42.166	Latimeria_chalumnae
ENSGAFG00000005111	tsen54	97	55.985	ENSLOCG00000011191	tsen54	97	55.792	Lepisosteus_oculatus
ENSGAFG00000005111	tsen54	92	46.830	ENSLAFG00000011655	TSEN54	92	46.830	Loxodonta_africana
ENSGAFG00000005111	tsen54	99	46.415	ENSMFAG00000000712	TSEN54	99	46.053	Macaca_fascicularis
ENSGAFG00000005111	tsen54	99	46.415	ENSMNEG00000029199	TSEN54	99	46.053	Macaca_nemestrina
ENSGAFG00000005111	tsen54	85	45.833	ENSMLEG00000044168	TSEN54	88	45.969	Mandrillus_leucophaeus
ENSGAFG00000005111	tsen54	100	69.804	ENSMAMG00000019773	tsen54	100	69.804	Mastacembelus_armatus
ENSGAFG00000005111	tsen54	100	67.562	ENSMZEG00005000884	tsen54	100	67.562	Maylandia_zebra
ENSGAFG00000005111	tsen54	92	43.145	ENSMGAG00000009556	TSEN54	92	44.355	Meleagris_gallopavo
ENSGAFG00000005111	tsen54	99	46.529	ENSMAUG00000016838	Tsen54	99	46.154	Mesocricetus_auratus
ENSGAFG00000005111	tsen54	99	47.776	ENSMICG00000044012	TSEN54	99	48.263	Microcebus_murinus
ENSGAFG00000005111	tsen54	99	47.092	ENSMOCG00000021585	Tsen54	99	46.529	Microtus_ochrogaster
ENSGAFG00000005111	tsen54	96	64.066	ENSMMOG00000020189	tsen54	99	64.476	Mola_mola
ENSGAFG00000005111	tsen54	96	45.594	ENSMODG00000007438	TSEN54	95	45.594	Monodelphis_domestica
ENSGAFG00000005111	tsen54	99	68.138	ENSMALG00000020573	tsen54	99	68.269	Monopterus_albus
ENSGAFG00000005111	tsen54	99	45.315	MGP_CAROLIEiJ_G0017417	Tsen54	99	45.507	Mus_caroli
ENSGAFG00000005111	tsen54	99	46.286	ENSMUSG00000020781	Tsen54	99	46.476	Mus_musculus
ENSGAFG00000005111	tsen54	99	46.286	MGP_PahariEiJ_G0018547	Tsen54	99	46.476	Mus_pahari
ENSGAFG00000005111	tsen54	99	46.768	MGP_SPRETEiJ_G0018262	Tsen54	99	46.958	Mus_spretus
ENSGAFG00000005111	tsen54	99	44.007	ENSMPUG00000013870	TSEN54	99	45.028	Mustela_putorius_furo
ENSGAFG00000005111	tsen54	99	46.365	ENSMLUG00000015298	TSEN54	99	46.365	Myotis_lucifugus
ENSGAFG00000005111	tsen54	99	47.784	ENSNGAG00000015673	Tsen54	99	47.784	Nannospalax_galili
ENSGAFG00000005111	tsen54	88	41.453	ENSMEUG00000011908	TSEN54	99	41.453	Notamacropus_eugenii
ENSGAFG00000005111	tsen54	96	44.181	ENSOPRG00000012513	TSEN54	96	43.936	Ochotona_princeps
ENSGAFG00000005111	tsen54	100	67.050	ENSONIG00000009543	tsen54	100	67.050	Oreochromis_niloticus
ENSGAFG00000005111	tsen54	99	43.774	ENSOCUG00000009875	TSEN54	99	43.762	Oryctolagus_cuniculus
ENSGAFG00000005111	tsen54	100	67.936	ENSORLG00000000852	tsen54	100	67.936	Oryzias_latipes
ENSGAFG00000005111	tsen54	100	67.936	ENSORLG00020018221	tsen54	100	67.936	Oryzias_latipes_hni
ENSGAFG00000005111	tsen54	98	68.916	ENSORLG00015009413	tsen54	99	68.916	Oryzias_latipes_hsok
ENSGAFG00000005111	tsen54	100	68.876	ENSOMEG00000014402	tsen54	97	68.876	Oryzias_melastigma
ENSGAFG00000005111	tsen54	96	46.169	ENSOGAG00000001442	TSEN54	97	46.169	Otolemur_garnettii
ENSGAFG00000005111	tsen54	85	43.886	ENSOARG00000010361	TSEN54	99	44.978	Ovis_aries
ENSGAFG00000005111	tsen54	94	46.076	ENSPPAG00000043519	TSEN54	99	47.619	Pan_paniscus
ENSGAFG00000005111	tsen54	99	47.348	ENSPPRG00000009162	TSEN54	99	47.917	Panthera_pardus
ENSGAFG00000005111	tsen54	85	46.120	ENSPTIG00000019312	TSEN54	96	46.460	Panthera_tigris_altaica
ENSGAFG00000005111	tsen54	99	46.415	ENSPTRG00000009646	TSEN54	99	46.053	Pan_troglodytes
ENSGAFG00000005111	tsen54	99	46.269	ENSPANG00000020133	TSEN54	99	46.067	Papio_anubis
ENSGAFG00000005111	tsen54	99	54.228	ENSPKIG00000023018	tsen54	99	54.831	Paramormyrops_kingsleyae
ENSGAFG00000005111	tsen54	80	45.309	ENSPSIG00000012807	TSEN54	100	45.080	Pelodiscus_sinensis
ENSGAFG00000005111	tsen54	93	49.895	ENSPMGG00000019578	tsen54	100	49.684	Periophthalmus_magnuspinnatus
ENSGAFG00000005111	tsen54	99	46.154	ENSPEMG00000014857	Tsen54	99	45.966	Peromyscus_maniculatus_bairdii
ENSGAFG00000005111	tsen54	100	91.600	ENSPFOG00000022740	tsen54	100	91.600	Poecilia_formosa
ENSGAFG00000005111	tsen54	100	92.339	ENSPLAG00000014847	tsen54	100	92.339	Poecilia_latipinna
ENSGAFG00000005111	tsen54	100	92.540	ENSPMEG00000022876	tsen54	100	92.540	Poecilia_mexicana
ENSGAFG00000005111	tsen54	100	91.532	ENSPREG00000013090	tsen54	100	91.532	Poecilia_reticulata
ENSGAFG00000005111	tsen54	91	47.558	ENSPPYG00000008629	TSEN54	99	48.387	Pongo_abelii
ENSGAFG00000005111	tsen54	92	42.029	ENSPCAG00000002093	TSEN54	96	42.029	Procavia_capensis
ENSGAFG00000005111	tsen54	99	46.756	ENSPCOG00000027880	TSEN54	99	47.238	Propithecus_coquereli
ENSGAFG00000005111	tsen54	99	46.415	ENSPVAG00000008446	TSEN54	99	46.792	Pteropus_vampyrus
ENSGAFG00000005111	tsen54	93	67.206	ENSPNYG00000010217	tsen54	100	67.206	Pundamilia_nyererei
ENSGAFG00000005111	tsen54	97	57.115	ENSPNAG00000003770	tsen54	97	57.115	Pygocentrus_nattereri
ENSGAFG00000005111	tsen54	99	47.538	ENSRNOG00000004598	Tsen54	99	47.538	Rattus_norvegicus
ENSGAFG00000005111	tsen54	99	46.241	ENSRBIG00000043040	TSEN54	99	45.677	Rhinopithecus_bieti
ENSGAFG00000005111	tsen54	99	46.241	ENSRROG00000030797	TSEN54	99	45.677	Rhinopithecus_roxellana
ENSGAFG00000005111	tsen54	99	42.912	ENSSBOG00000013543	TSEN54	98	44.213	Saimiri_boliviensis_boliviensis
ENSGAFG00000005111	tsen54	96	45.507	ENSSHAG00000018127	TSEN54	96	45.698	Sarcophilus_harrisii
ENSGAFG00000005111	tsen54	80	54.824	ENSSFOG00015004093	tsen54	99	54.588	Scleropages_formosus
ENSGAFG00000005111	tsen54	97	67.520	ENSSMAG00000012449	tsen54	98	68.701	Scophthalmus_maximus
ENSGAFG00000005111	tsen54	100	70.962	ENSSDUG00000021506	tsen54	100	70.962	Seriola_dumerili
ENSGAFG00000005111	tsen54	100	70.769	ENSSLDG00000016303	tsen54	100	70.769	Seriola_lalandi_dorsalis
ENSGAFG00000005111	tsen54	79	43.224	ENSSPUG00000008988	TSEN54	96	42.623	Sphenodon_punctatus
ENSGAFG00000005111	tsen54	93	72.340	ENSSPAG00000008098	-	99	72.340	Stegastes_partitus
ENSGAFG00000005111	tsen54	80	66.256	ENSSPAG00000008047	tsen54	100	66.256	Stegastes_partitus
ENSGAFG00000005111	tsen54	96	46.718	ENSSSCG00000036852	TSEN54	97	47.276	Sus_scrofa
ENSGAFG00000005111	tsen54	85	47.556	ENSTGUG00000008548	TSEN54	99	46.889	Taeniopygia_guttata
ENSGAFG00000005111	tsen54	100	67.131	ENSTRUG00000004230	tsen54	100	66.932	Takifugu_rubripes
ENSGAFG00000005111	tsen54	96	65.051	ENSTNIG00000011281	tsen54	98	65.720	Tetraodon_nigroviridis
ENSGAFG00000005111	tsen54	85	44.639	ENSTTRG00000015828	TSEN54	99	45.553	Tursiops_truncatus
ENSGAFG00000005111	tsen54	80	44.084	ENSUAMG00000010045	TSEN54	99	43.619	Ursus_americanus
ENSGAFG00000005111	tsen54	82	44.570	ENSUMAG00000008979	TSEN54	99	44.118	Ursus_maritimus
ENSGAFG00000005111	tsen54	95	48.148	ENSVVUG00000011411	TSEN54	97	48.134	Vulpes_vulpes
ENSGAFG00000005111	tsen54	97	45.988	ENSXETG00000012532	tsen54	100	61.667	Xenopus_tropicalis
ENSGAFG00000005111	tsen54	97	83.576	ENSXCOG00000018245	tsen54	100	87.871	Xiphophorus_couchianus
ENSGAFG00000005111	tsen54	100	94.758	ENSXMAG00000018818	tsen54	100	94.758	Xiphophorus_maculatus