EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005112 (Gene tree)
Gene ID: -
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 25653 bases
Position: chrNHOQ01001904.1:3058906-3084558
Accession: ZDB-GENE-050208-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007546	RNA_pol_Rpb1_5	PF04998.17	1.6e-88	1	1
ENSGAFP00000007546	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSGAFP00000007546	RNA_pol_Rpb1_2	PF00623.20	4.7e-73	1	1
ENSGAFP00000007546	RNA_pol_Rpb1_3	PF04983.18	1.5e-39	1	1
ENSGAFP00000007546	RNA_pol_Rpb1_1	PF04997.12	5.5e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007625	-	7202	-	ENSGAFP00000007546	1390 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005112	polr3a	69	32.705	ENSGAFG00000015266	polr1a	63	32.705
ENSGAFG00000005112	polr3a	91	37.270	ENSGAFG00000005389	polr2a	73	37.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005112	polr3a	100	89.856	ENSG00000148606	POLR3A	98	92.405	Homo_sapiens
ENSGAFG00000005112	polr3a	62	92.218	ENSAPOG00000022727	polr3a	99	92.218	Acanthochromis_polyacanthus
ENSGAFG00000005112	polr3a	100	89.806	ENSAMEG00000017801	POLR3A	100	89.806	Ailuropoda_melanoleuca
ENSGAFG00000005112	polr3a	94	95.769	ENSACIG00000024504	polr3a	97	95.769	Amphilophus_citrinellus
ENSGAFG00000005112	polr3a	100	95.540	ENSAOCG00000002071	polr3a	100	95.540	Amphiprion_ocellaris
ENSGAFG00000005112	polr3a	100	92.158	ENSAOCG00000003949	-	100	92.158	Amphiprion_ocellaris
ENSGAFG00000005112	polr3a	100	95.324	ENSAPEG00000001966	-	100	95.324	Amphiprion_percula
ENSGAFG00000005112	polr3a	100	95.540	ENSAPEG00000013351	polr3a	100	95.540	Amphiprion_percula
ENSGAFG00000005112	polr3a	100	95.396	ENSATEG00000023277	polr3a	100	95.396	Anabas_testudineus
ENSGAFG00000005112	polr3a	99	90.400	ENSAPLG00000015878	POLR3A	99	90.400	Anas_platyrhynchos
ENSGAFG00000005112	polr3a	93	89.076	ENSACAG00000007985	POLR3A	99	89.076	Anolis_carolinensis
ENSGAFG00000005112	polr3a	100	87.203	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSGAFG00000005112	polr3a	100	95.396	ENSACLG00000005914	polr3a	100	95.396	Astatotilapia_calliptera
ENSGAFG00000005112	polr3a	99	88.905	ENSAMXG00000018852	polr3a	99	88.905	Astyanax_mexicanus
ENSGAFG00000005112	polr3a	100	89.784	ENSBTAG00000013259	POLR3A	100	89.784	Bos_taurus
ENSGAFG00000005112	polr3a	98	56.784	WBGene00004411	rpc-1	99	56.784	Caenorhabditis_elegans
ENSGAFG00000005112	polr3a	100	89.712	ENSCJAG00000001015	POLR3A	100	89.712	Callithrix_jacchus
ENSGAFG00000005112	polr3a	100	89.928	ENSCAFG00000015546	POLR3A	100	89.928	Canis_familiaris
ENSGAFG00000005112	polr3a	100	89.928	ENSCAFG00020014711	POLR3A	100	89.928	Canis_lupus_dingo
ENSGAFG00000005112	polr3a	100	89.496	ENSCHIG00000000352	POLR3A	100	89.496	Capra_hircus
ENSGAFG00000005112	polr3a	100	89.496	ENSTSYG00000006671	POLR3A	100	89.496	Carlito_syrichta
ENSGAFG00000005112	polr3a	99	89.164	ENSCAPG00000016031	POLR3A	100	89.164	Cavia_aperea
ENSGAFG00000005112	polr3a	100	89.209	ENSCPOG00000022387	POLR3A	100	89.209	Cavia_porcellus
ENSGAFG00000005112	polr3a	100	88.129	ENSCCAG00000032995	POLR3A	96	92.405	Cebus_capucinus
ENSGAFG00000005112	polr3a	100	89.928	ENSCATG00000035842	POLR3A	98	92.405	Cercocebus_atys
ENSGAFG00000005112	polr3a	100	89.424	ENSCLAG00000009629	POLR3A	100	89.424	Chinchilla_lanigera
ENSGAFG00000005112	polr3a	100	89.856	ENSCSAG00000009292	POLR3A	100	89.856	Chlorocebus_sabaeus
ENSGAFG00000005112	polr3a	81	81.710	ENSCHOG00000008368	POLR3A	95	81.710	Choloepus_hoffmanni
ENSGAFG00000005112	polr3a	99	90.281	ENSCPBG00000002079	POLR3A	99	90.281	Chrysemys_picta_bellii
ENSGAFG00000005112	polr3a	99	69.164	ENSCSAVG00000009925	-	99	69.164	Ciona_savignyi
ENSGAFG00000005112	polr3a	86	85.643	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSGAFG00000005112	polr3a	78	89.989	ENSCGRG00001015599	-	92	89.989	Cricetulus_griseus_chok1gshd
ENSGAFG00000005112	polr3a	88	88.661	ENSCGRG00000001019	Polr3a	100	88.661	Cricetulus_griseus_crigri
ENSGAFG00000005112	polr3a	100	95.612	ENSCSEG00000016653	polr3a	100	95.612	Cynoglossus_semilaevis
ENSGAFG00000005112	polr3a	100	96.978	ENSCVAG00000023049	polr3a	100	96.978	Cyprinodon_variegatus
ENSGAFG00000005112	polr3a	99	91.643	ENSDARG00000102569	polr3a	99	91.643	Danio_rerio
ENSGAFG00000005112	polr3a	100	88.993	ENSDNOG00000010194	POLR3A	100	88.993	Dasypus_novemcinctus
ENSGAFG00000005112	polr3a	100	89.784	ENSDORG00000000184	Polr3a	100	89.784	Dipodomys_ordii
ENSGAFG00000005112	polr3a	99	57.091	FBgn0030687	CG17209	99	57.091	Drosophila_melanogaster
ENSGAFG00000005112	polr3a	88	88.664	ENSETEG00000007477	POLR3A	89	88.664	Echinops_telfairi
ENSGAFG00000005112	polr3a	59	75.761	ENSEBUG00000013761	polr3a	98	75.761	Eptatretus_burgeri
ENSGAFG00000005112	polr3a	100	89.712	ENSEASG00005023053	POLR3A	100	89.712	Equus_asinus_asinus
ENSGAFG00000005112	polr3a	97	89.940	ENSECAG00000019416	POLR3A	100	89.564	Equus_caballus
ENSGAFG00000005112	polr3a	96	85.384	ENSEEUG00000001774	POLR3A	100	85.384	Erinaceus_europaeus
ENSGAFG00000005112	polr3a	100	90.811	ENSELUG00000014016	polr3a	100	90.811	Esox_lucius
ENSGAFG00000005112	polr3a	100	90.072	ENSFCAG00000000843	POLR3A	100	90.072	Felis_catus
ENSGAFG00000005112	polr3a	100	90.079	ENSFALG00000006913	POLR3A	100	90.079	Ficedula_albicollis
ENSGAFG00000005112	polr3a	100	89.496	ENSFDAG00000007813	POLR3A	100	89.496	Fukomys_damarensis
ENSGAFG00000005112	polr3a	95	96.711	ENSFHEG00000011922	polr3a	99	96.711	Fundulus_heteroclitus
ENSGAFG00000005112	polr3a	100	87.438	ENSGMOG00000000291	polr3a	99	87.438	Gadus_morhua
ENSGAFG00000005112	polr3a	100	90.504	ENSGALG00000004947	POLR3A	100	90.504	Gallus_gallus
ENSGAFG00000005112	polr3a	100	93.597	ENSGACG00000002304	polr3a	100	93.597	Gasterosteus_aculeatus
ENSGAFG00000005112	polr3a	95	90.008	ENSGAGG00000010386	POLR3A	98	90.008	Gopherus_agassizii
ENSGAFG00000005112	polr3a	99	88.728	ENSGGOG00000027729	POLR3A	100	91.064	Gorilla_gorilla
ENSGAFG00000005112	polr3a	100	95.396	ENSHBUG00000018098	polr3a	100	95.396	Haplochromis_burtoni
ENSGAFG00000005112	polr3a	100	89.424	ENSHGLG00000017899	POLR3A	100	89.424	Heterocephalus_glaber_female
ENSGAFG00000005112	polr3a	100	89.424	ENSHGLG00100008483	POLR3A	100	89.424	Heterocephalus_glaber_male
ENSGAFG00000005112	polr3a	100	94.101	ENSHCOG00000001075	polr3a	100	94.101	Hippocampus_comes
ENSGAFG00000005112	polr3a	100	89.856	ENSSTOG00000012983	POLR3A	100	89.856	Ictidomys_tridecemlineatus
ENSGAFG00000005112	polr3a	100	95.540	ENSKMAG00000015290	polr3a	100	95.540	Kryptolebias_marmoratus
ENSGAFG00000005112	polr3a	99	93.449	ENSLBEG00000017214	polr3a	99	93.449	Labrus_bergylta
ENSGAFG00000005112	polr3a	97	88.104	ENSLACG00000018557	POLR3A	99	88.104	Latimeria_chalumnae
ENSGAFG00000005112	polr3a	100	91.816	ENSLOCG00000004942	polr3a	100	91.816	Lepisosteus_oculatus
ENSGAFG00000005112	polr3a	100	88.497	ENSLAFG00000016719	POLR3A	100	88.497	Loxodonta_africana
ENSGAFG00000005112	polr3a	100	89.856	ENSMFAG00000032218	POLR3A	100	89.856	Macaca_fascicularis
ENSGAFG00000005112	polr3a	100	89.856	ENSMMUG00000005514	POLR3A	98	92.405	Macaca_mulatta
ENSGAFG00000005112	polr3a	99	83.417	ENSMNEG00000035163	POLR3A	99	89.680	Macaca_nemestrina
ENSGAFG00000005112	polr3a	100	86.043	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSGAFG00000005112	polr3a	100	95.180	ENSMAMG00000017497	polr3a	100	95.180	Mastacembelus_armatus
ENSGAFG00000005112	polr3a	100	95.396	ENSMZEG00005000576	polr3a	100	95.396	Maylandia_zebra
ENSGAFG00000005112	polr3a	100	73.509	ENSMGAG00000005713	-	100	73.509	Meleagris_gallopavo
ENSGAFG00000005112	polr3a	100	87.410	ENSMAUG00000016247	Polr3a	100	87.410	Mesocricetus_auratus
ENSGAFG00000005112	polr3a	100	89.856	ENSMICG00000005937	POLR3A	100	91.051	Microcebus_murinus
ENSGAFG00000005112	polr3a	100	89.712	ENSMOCG00000012185	Polr3a	100	89.712	Microtus_ochrogaster
ENSGAFG00000005112	polr3a	100	94.101	ENSMMOG00000013822	polr3a	100	94.101	Mola_mola
ENSGAFG00000005112	polr3a	100	89.137	ENSMODG00000001036	POLR3A	100	89.137	Monodelphis_domestica
ENSGAFG00000005112	polr3a	100	94.820	ENSMALG00000001249	polr3a	100	94.820	Monopterus_albus
ENSGAFG00000005112	polr3a	100	89.496	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.496	Mus_caroli
ENSGAFG00000005112	polr3a	100	89.568	ENSMUSG00000025280	Polr3a	100	89.568	Mus_musculus
ENSGAFG00000005112	polr3a	100	89.496	MGP_PahariEiJ_G0030029	Polr3a	100	89.496	Mus_pahari
ENSGAFG00000005112	polr3a	100	86.906	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSGAFG00000005112	polr3a	100	89.301	ENSMPUG00000003790	POLR3A	100	89.301	Mustela_putorius_furo
ENSGAFG00000005112	polr3a	100	88.705	ENSMLUG00000011522	POLR3A	100	88.705	Myotis_lucifugus
ENSGAFG00000005112	polr3a	100	88.201	ENSNGAG00000015863	Polr3a	100	88.201	Nannospalax_galili
ENSGAFG00000005112	polr3a	100	93.237	ENSNBRG00000014262	polr3a	100	93.237	Neolamprologus_brichardi
ENSGAFG00000005112	polr3a	88	83.032	ENSNLEG00000010501	POLR3A	92	83.032	Nomascus_leucogenys
ENSGAFG00000005112	polr3a	99	76.727	ENSMEUG00000012446	POLR3A	100	76.727	Notamacropus_eugenii
ENSGAFG00000005112	polr3a	100	85.108	ENSOPRG00000001880	-	100	85.108	Ochotona_princeps
ENSGAFG00000005112	polr3a	100	89.065	ENSODEG00000015146	POLR3A	100	89.065	Octodon_degus
ENSGAFG00000005112	polr3a	100	95.683	ENSONIG00000016129	polr3a	100	95.683	Oreochromis_niloticus
ENSGAFG00000005112	polr3a	98	88.970	ENSOANG00000007013	POLR3A	100	88.970	Ornithorhynchus_anatinus
ENSGAFG00000005112	polr3a	100	89.353	ENSOCUG00000012450	POLR3A	100	89.353	Oryctolagus_cuniculus
ENSGAFG00000005112	polr3a	100	95.252	ENSORLG00000008958	polr3a	100	95.252	Oryzias_latipes
ENSGAFG00000005112	polr3a	100	92.950	ENSORLG00020007525	polr3a	98	95.380	Oryzias_latipes_hni
ENSGAFG00000005112	polr3a	100	95.252	ENSORLG00015006633	polr3a	100	95.252	Oryzias_latipes_hsok
ENSGAFG00000005112	polr3a	100	94.676	ENSOMEG00000012865	polr3a	100	94.676	Oryzias_melastigma
ENSGAFG00000005112	polr3a	100	89.640	ENSOGAG00000010995	POLR3A	100	89.640	Otolemur_garnettii
ENSGAFG00000005112	polr3a	100	89.440	ENSOARG00000009656	POLR3A	100	89.440	Ovis_aries
ENSGAFG00000005112	polr3a	100	90.072	ENSPPRG00000002128	POLR3A	100	90.072	Panthera_pardus
ENSGAFG00000005112	polr3a	100	90.072	ENSPTIG00000020916	POLR3A	100	90.072	Panthera_tigris_altaica
ENSGAFG00000005112	polr3a	100	89.928	ENSPTRG00000002664	POLR3A	98	92.405	Pan_troglodytes
ENSGAFG00000005112	polr3a	100	89.856	ENSPANG00000022508	POLR3A	98	92.405	Papio_anubis
ENSGAFG00000005112	polr3a	100	92.446	ENSPKIG00000008140	polr3a	100	93.146	Paramormyrops_kingsleyae
ENSGAFG00000005112	polr3a	98	89.993	ENSPSIG00000002092	POLR3A	100	89.993	Pelodiscus_sinensis
ENSGAFG00000005112	polr3a	100	89.281	ENSPEMG00000006768	Polr3a	100	89.281	Peromyscus_maniculatus_bairdii
ENSGAFG00000005112	polr3a	100	89.137	ENSPCIG00000015842	POLR3A	100	89.137	Phascolarctos_cinereus
ENSGAFG00000005112	polr3a	54	99.060	ENSPFOG00000006458	polr3a	100	99.060	Poecilia_formosa
ENSGAFG00000005112	polr3a	100	99.137	ENSPLAG00000000997	polr3a	100	99.137	Poecilia_latipinna
ENSGAFG00000005112	polr3a	100	99.065	ENSPMEG00000006821	polr3a	100	99.065	Poecilia_mexicana
ENSGAFG00000005112	polr3a	100	98.993	ENSPREG00000002385	polr3a	100	98.993	Poecilia_reticulata
ENSGAFG00000005112	polr3a	93	89.698	ENSPPYG00000002305	POLR3A	99	89.698	Pongo_abelii
ENSGAFG00000005112	polr3a	84	78.053	ENSPCAG00000005690	POLR3A	87	78.053	Procavia_capensis
ENSGAFG00000005112	polr3a	100	89.784	ENSPCOG00000028311	POLR3A	100	89.784	Propithecus_coquereli
ENSGAFG00000005112	polr3a	100	88.345	ENSPVAG00000015553	POLR3A	100	88.345	Pteropus_vampyrus
ENSGAFG00000005112	polr3a	100	95.468	ENSPNYG00000020987	polr3a	100	95.468	Pundamilia_nyererei
ENSGAFG00000005112	polr3a	99	87.752	ENSPNAG00000006629	polr3a	99	87.752	Pygocentrus_nattereri
ENSGAFG00000005112	polr3a	100	89.568	ENSRNOG00000010008	Polr3a	100	89.568	Rattus_norvegicus
ENSGAFG00000005112	polr3a	100	86.043	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSGAFG00000005112	polr3a	100	89.928	ENSRROG00000025527	POLR3A	98	92.405	Rhinopithecus_roxellana
ENSGAFG00000005112	polr3a	97	50.245	YOR116C	RPO31	98	50.245	Saccharomyces_cerevisiae
ENSGAFG00000005112	polr3a	100	89.784	ENSSBOG00000022199	POLR3A	100	89.784	Saimiri_boliviensis_boliviensis
ENSGAFG00000005112	polr3a	100	89.065	ENSSHAG00000007588	POLR3A	94	89.065	Sarcophilus_harrisii
ENSGAFG00000005112	polr3a	100	92.734	ENSSFOG00015014357	polr3a	100	92.734	Scleropages_formosus
ENSGAFG00000005112	polr3a	100	95.036	ENSSMAG00000001780	polr3a	100	95.036	Scophthalmus_maximus
ENSGAFG00000005112	polr3a	100	95.971	ENSSDUG00000019840	polr3a	100	95.971	Seriola_dumerili
ENSGAFG00000005112	polr3a	100	95.827	ENSSLDG00000023908	polr3a	100	95.827	Seriola_lalandi_dorsalis
ENSGAFG00000005112	polr3a	69	90.282	ENSSARG00000009916	POLR3A	89	90.282	Sorex_araneus
ENSGAFG00000005112	polr3a	100	88.058	ENSSPUG00000013209	POLR3A	100	88.058	Sphenodon_punctatus
ENSGAFG00000005112	polr3a	100	95.755	ENSSPAG00000017712	polr3a	100	95.755	Stegastes_partitus
ENSGAFG00000005112	polr3a	100	89.712	ENSSSCG00000010327	POLR3A	100	89.712	Sus_scrofa
ENSGAFG00000005112	polr3a	100	90.072	ENSTGUG00000006423	-	100	90.072	Taeniopygia_guttata
ENSGAFG00000005112	polr3a	100	94.532	ENSTRUG00000013488	polr3a	100	94.532	Takifugu_rubripes
ENSGAFG00000005112	polr3a	100	94.397	ENSTNIG00000013151	polr3a	100	94.397	Tetraodon_nigroviridis
ENSGAFG00000005112	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSGAFG00000005112	polr3a	100	83.525	ENSTTRG00000007817	POLR3A	100	83.525	Tursiops_truncatus
ENSGAFG00000005112	polr3a	100	87.626	ENSUAMG00000011283	POLR3A	100	87.626	Ursus_americanus
ENSGAFG00000005112	polr3a	100	89.928	ENSUMAG00000013913	POLR3A	100	89.928	Ursus_maritimus
ENSGAFG00000005112	polr3a	99	81.818	ENSVPAG00000003285	POLR3A	100	81.818	Vicugna_pacos
ENSGAFG00000005112	polr3a	100	89.928	ENSVVUG00000025523	POLR3A	100	89.928	Vulpes_vulpes
ENSGAFG00000005112	polr3a	86	90.476	ENSXETG00000018101	polr3a	100	90.476	Xenopus_tropicalis
ENSGAFG00000005112	polr3a	100	99.353	ENSXMAG00000015213	polr3a	100	99.353	Xiphophorus_maculatus