EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4764 bases
Position: chrNHOQ01002850.1:3286021-3290784
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007593	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007672	-	1646	-	ENSGAFP00000007593	180 (aa)	-	UPI000293B0DD

Gene Model

Click here to download ENSGAFG00000005163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005163	-	98	44.633	ENSGAFG00000002547	arl5c	98	44.633
ENSGAFG00000005163	-	98	79.661	ENSGAFG00000021727	arf3b	98	79.661
ENSGAFG00000005163	-	92	46.784	ENSGAFG00000020556	arl4cb	89	46.784
ENSGAFG00000005163	-	89	44.444	ENSGAFG00000008601	arl3l2	76	44.444
ENSGAFG00000005163	-	89	30.058	ENSGAFG00000007081	sar1b	87	30.058
ENSGAFG00000005163	-	100	79.444	ENSGAFG00000021449	-	100	79.444
ENSGAFG00000005163	-	80	35.862	ENSGAFG00000010938	arl8ba	80	35.862
ENSGAFG00000005163	-	70	35.433	ENSGAFG00000017776	arl8a	74	35.433
ENSGAFG00000005163	-	97	81.609	ENSGAFG00000018151	-	97	81.609
ENSGAFG00000005163	-	87	49.686	ENSGAFG00000012819	-	81	49.686
ENSGAFG00000005163	-	82	44.295	ENSGAFG00000000058	arl11	94	44.295
ENSGAFG00000005163	-	92	34.337	ENSGAFG00000008497	arl8bb	89	34.337
ENSGAFG00000005163	-	98	31.746	ENSGAFG00000006962	arfrp1	93	31.746
ENSGAFG00000005163	-	89	32.000	ENSGAFG00000009702	sar1ab	87	32.000
ENSGAFG00000005163	-	78	36.420	ENSGAFG00000011077	-	92	36.420
ENSGAFG00000005163	-	87	43.210	ENSGAFG00000012473	arl4d	81	43.210
ENSGAFG00000005163	-	93	41.176	ENSGAFG00000010573	-	92	41.765
ENSGAFG00000005163	-	98	46.328	ENSGAFG00000003465	arl5a	80	46.328
ENSGAFG00000005163	-	89	31.429	ENSGAFG00000004846	-	87	31.429
ENSGAFG00000005163	-	92	60.606	ENSGAFG00000006973	arl1	99	60.606
ENSGAFG00000005163	-	91	44.706	ENSGAFG00000014283	arl4aa	85	44.706
ENSGAFG00000005163	-	99	90.503	ENSGAFG00000018703	arf5	99	90.503
ENSGAFG00000005163	-	94	39.888	ENSGAFG00000012355	ARL6	96	39.888
ENSGAFG00000005163	-	91	47.561	ENSGAFG00000015025	arl2	89	47.561
ENSGAFG00000005163	-	98	81.921	ENSGAFG00000010799	arf2b	98	81.921
ENSGAFG00000005163	-	98	79.661	ENSGAFG00000009954	-	79	79.661
ENSGAFG00000005163	-	92	32.759	ENSGAFG00000000025	arl13b	65	32.759
ENSGAFG00000005163	-	91	47.239	ENSGAFG00000005872	arl3	92	47.239
ENSGAFG00000005163	-	62	75.676	ENSGAFG00000002801	-	98	75.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005163	-	99	86.034	ENSG00000004059	ARF5	99	86.755	Homo_sapiens
ENSGAFG00000005163	-	100	91.667	ENSAPOG00000000667	-	100	91.667	Acanthochromis_polyacanthus
ENSGAFG00000005163	-	99	86.034	ENSAMEG00000004635	ARF5	99	86.034	Ailuropoda_melanoleuca
ENSGAFG00000005163	-	99	89.944	ENSACIG00000005843	arf5	99	89.944	Amphilophus_citrinellus
ENSGAFG00000005163	-	98	69.492	ENSACIG00000014610	zgc:110286	98	69.492	Amphilophus_citrinellus
ENSGAFG00000005163	-	100	93.889	ENSACIG00000000467	-	100	93.889	Amphilophus_citrinellus
ENSGAFG00000005163	-	100	91.111	ENSAOCG00000008113	-	100	91.111	Amphiprion_ocellaris
ENSGAFG00000005163	-	100	88.333	ENSAOCG00000023329	arf5	100	88.333	Amphiprion_ocellaris
ENSGAFG00000005163	-	100	91.111	ENSAPEG00000003087	-	100	91.111	Amphiprion_percula
ENSGAFG00000005163	-	100	88.333	ENSAPEG00000024614	arf5	100	88.333	Amphiprion_percula
ENSGAFG00000005163	-	100	92.778	ENSATEG00000001302	-	100	92.778	Anabas_testudineus
ENSGAFG00000005163	-	99	89.385	ENSATEG00000003053	ARF5	99	89.385	Anabas_testudineus
ENSGAFG00000005163	-	99	86.034	ENSANAG00000026446	ARF5	99	86.034	Aotus_nancymaae
ENSGAFG00000005163	-	100	92.778	ENSACLG00000025604	-	100	92.778	Astatotilapia_calliptera
ENSGAFG00000005163	-	99	90.503	ENSACLG00000005705	arf5	99	90.503	Astatotilapia_calliptera
ENSGAFG00000005163	-	99	89.944	ENSAMXG00000031774	ARF5	99	89.944	Astyanax_mexicanus
ENSGAFG00000005163	-	99	90.503	ENSAMXG00000038224	-	99	90.503	Astyanax_mexicanus
ENSGAFG00000005163	-	99	87.709	ENSAMXG00000031467	arf4a	99	87.709	Astyanax_mexicanus
ENSGAFG00000005163	-	99	91.061	ENSAMXG00000004249	-	99	91.061	Astyanax_mexicanus
ENSGAFG00000005163	-	99	86.034	ENSBTAG00000009366	ARF5	99	86.034	Bos_taurus
ENSGAFG00000005163	-	99	86.592	WBGene00000183	arf-3	99	86.592	Caenorhabditis_elegans
ENSGAFG00000005163	-	99	86.034	ENSCJAG00000017604	ARF5	99	86.034	Callithrix_jacchus
ENSGAFG00000005163	-	99	72.300	ENSCAFG00020021629	ARF5	99	72.300	Canis_lupus_dingo
ENSGAFG00000005163	-	99	86.034	ENSCHIG00000018906	ARF5	99	86.034	Capra_hircus
ENSGAFG00000005163	-	99	85.000	ENSCPOG00000006239	ARF5	99	85.000	Cavia_porcellus
ENSGAFG00000005163	-	99	86.034	ENSCCAG00000027943	-	99	86.034	Cebus_capucinus
ENSGAFG00000005163	-	99	86.034	ENSCATG00000010217	ARF5	99	86.034	Cercocebus_atys
ENSGAFG00000005163	-	99	86.034	ENSCLAG00000007930	ARF5	99	86.034	Chinchilla_lanigera
ENSGAFG00000005163	-	99	86.034	ENSCSAG00000010208	ARF5	99	86.034	Chlorocebus_sabaeus
ENSGAFG00000005163	-	100	75.000	ENSCING00000004846	-	100	75.000	Ciona_intestinalis
ENSGAFG00000005163	-	100	73.077	ENSCSAVG00000001959	-	100	73.077	Ciona_savignyi
ENSGAFG00000005163	-	89	85.625	ENSCANG00000037234	ARF5	98	85.625	Colobus_angolensis_palliatus
ENSGAFG00000005163	-	99	86.034	ENSCGRG00001024919	Arf5	99	86.034	Cricetulus_griseus_chok1gshd
ENSGAFG00000005163	-	99	82.682	ENSCSEG00000006004	arf5	99	82.682	Cynoglossus_semilaevis
ENSGAFG00000005163	-	100	96.667	ENSCVAG00000011381	-	100	96.667	Cyprinodon_variegatus
ENSGAFG00000005163	-	99	90.503	ENSCVAG00000007314	-	99	90.503	Cyprinodon_variegatus
ENSGAFG00000005163	-	99	90.503	ENSCVAG00000009124	ARF5	99	90.503	Cyprinodon_variegatus
ENSGAFG00000005163	-	99	91.061	ENSDARG00000070472	arf5	99	91.061	Danio_rerio
ENSGAFG00000005163	-	99	71.111	ENSDARG00000074210	ARF5	88	71.111	Danio_rerio
ENSGAFG00000005163	-	99	90.503	ENSDARG00000113899	zgc:77650	99	90.503	Danio_rerio
ENSGAFG00000005163	-	99	87.709	ENSDARG00000045989	arf4a	99	87.709	Danio_rerio
ENSGAFG00000005163	-	99	86.034	ENSDORG00000000325	Arf5	99	86.034	Dipodomys_ordii
ENSGAFG00000005163	-	99	84.916	FBgn0013749	Arf102F	99	84.916	Drosophila_melanogaster
ENSGAFG00000005163	-	97	82.759	ENSETEG00000009275	ARF5	99	82.759	Echinops_telfairi
ENSGAFG00000005163	-	99	71.508	ENSEBUG00000004484	-	99	71.508	Eptatretus_burgeri
ENSGAFG00000005163	-	99	83.799	ENSEBUG00000014420	-	99	83.799	Eptatretus_burgeri
ENSGAFG00000005163	-	99	72.626	ENSELUG00000014428	arf4	99	72.626	Esox_lucius
ENSGAFG00000005163	-	99	86.034	ENSFCAG00000005482	ARF5	99	86.034	Felis_catus
ENSGAFG00000005163	-	99	89.944	ENSFHEG00000023119	arf5	99	89.944	Fundulus_heteroclitus
ENSGAFG00000005163	-	99	84.916	ENSGMOG00000008747	arf5	99	84.916	Gadus_morhua
ENSGAFG00000005163	-	99	84.358	ENSGMOG00000019109	-	99	84.358	Gadus_morhua
ENSGAFG00000005163	-	100	87.778	ENSGACG00000012500	-	100	87.778	Gasterosteus_aculeatus
ENSGAFG00000005163	-	99	89.944	ENSGACG00000000686	arf5	99	89.944	Gasterosteus_aculeatus
ENSGAFG00000005163	-	99	86.592	ENSGAGG00000000231	ARF5	99	86.592	Gopherus_agassizii
ENSGAFG00000005163	-	99	86.034	ENSGGOG00000016749	ARF5	99	86.034	Gorilla_gorilla
ENSGAFG00000005163	-	100	92.778	ENSHBUG00000011041	-	100	92.778	Haplochromis_burtoni
ENSGAFG00000005163	-	99	90.503	ENSHBUG00000008546	arf5	99	90.503	Haplochromis_burtoni
ENSGAFG00000005163	-	99	86.034	ENSHGLG00000007494	ARF5	99	86.034	Heterocephalus_glaber_female
ENSGAFG00000005163	-	99	84.916	ENSHGLG00100006040	ARF5	60	84.916	Heterocephalus_glaber_male
ENSGAFG00000005163	-	99	86.592	ENSHCOG00000015577	-	100	86.592	Hippocampus_comes
ENSGAFG00000005163	-	99	87.709	ENSIPUG00000007016	arf4	99	87.709	Ictalurus_punctatus
ENSGAFG00000005163	-	99	89.944	ENSIPUG00000004215	arf5	99	89.944	Ictalurus_punctatus
ENSGAFG00000005163	-	99	71.508	ENSIPUG00000006913	-	70	71.508	Ictalurus_punctatus
ENSGAFG00000005163	-	99	89.944	ENSIPUG00000004159	Arf5	99	89.944	Ictalurus_punctatus
ENSGAFG00000005163	-	99	86.034	ENSSTOG00000002104	ARF5	99	86.034	Ictidomys_tridecemlineatus
ENSGAFG00000005163	-	99	86.034	ENSJJAG00000005105	Arf5	99	86.034	Jaculus_jaculus
ENSGAFG00000005163	-	100	95.000	ENSKMAG00000012816	-	100	95.000	Kryptolebias_marmoratus
ENSGAFG00000005163	-	99	84.831	ENSLBEG00000012002	-	98	84.831	Labrus_bergylta
ENSGAFG00000005163	-	99	87.709	ENSLBEG00000026532	arf5	99	87.709	Labrus_bergylta
ENSGAFG00000005163	-	99	86.034	ENSLAFG00000011469	ARF5	99	86.034	Loxodonta_africana
ENSGAFG00000005163	-	99	86.034	ENSMFAG00000019772	ARF5	99	86.034	Macaca_fascicularis
ENSGAFG00000005163	-	99	86.034	ENSMMUG00000046381	ARF5	99	86.034	Macaca_mulatta
ENSGAFG00000005163	-	99	86.034	ENSMNEG00000040893	ARF5	99	86.034	Macaca_nemestrina
ENSGAFG00000005163	-	99	88.827	ENSMAMG00000021160	arf5	99	88.827	Mastacembelus_armatus
ENSGAFG00000005163	-	100	91.667	ENSMAMG00000008223	-	100	91.667	Mastacembelus_armatus
ENSGAFG00000005163	-	99	90.503	ENSMZEG00005015033	arf5	66	90.503	Maylandia_zebra
ENSGAFG00000005163	-	88	91.772	ENSMZEG00005019741	-	94	91.772	Maylandia_zebra
ENSGAFG00000005163	-	99	86.034	ENSMAUG00000014825	Arf5	99	86.034	Mesocricetus_auratus
ENSGAFG00000005163	-	99	86.034	ENSMICG00000000091	ARF5	99	86.034	Microcebus_murinus
ENSGAFG00000005163	-	99	86.034	ENSMOCG00000022861	Arf5	99	86.034	Microtus_ochrogaster
ENSGAFG00000005163	-	99	85.475	ENSMODG00000015229	ARF5	99	85.475	Monodelphis_domestica
ENSGAFG00000005163	-	99	70.391	ENSMALG00000022638	zgc:110286	100	70.391	Monopterus_albus
ENSGAFG00000005163	-	100	92.778	ENSMALG00000006020	-	100	92.778	Monopterus_albus
ENSGAFG00000005163	-	99	89.385	ENSMALG00000010117	-	99	89.385	Monopterus_albus
ENSGAFG00000005163	-	99	86.034	MGP_CAROLIEiJ_G0028156	Arf5	99	86.034	Mus_caroli
ENSGAFG00000005163	-	99	86.034	ENSMUSG00000020440	Arf5	99	86.034	Mus_musculus
ENSGAFG00000005163	-	99	86.034	MGP_PahariEiJ_G0021914	Arf5	99	86.034	Mus_pahari
ENSGAFG00000005163	-	99	86.034	MGP_SPRETEiJ_G0029156	Arf5	99	86.034	Mus_spretus
ENSGAFG00000005163	-	99	86.034	ENSMPUG00000006675	ARF5	99	86.034	Mustela_putorius_furo
ENSGAFG00000005163	-	99	86.034	ENSMLUG00000017122	ARF5	99	86.034	Myotis_lucifugus
ENSGAFG00000005163	-	99	86.034	ENSNGAG00000011743	Arf5	99	86.034	Nannospalax_galili
ENSGAFG00000005163	-	99	90.503	ENSNBRG00000018854	arf5	99	90.503	Neolamprologus_brichardi
ENSGAFG00000005163	-	99	86.034	ENSODEG00000011800	ARF5	99	86.034	Octodon_degus
ENSGAFG00000005163	-	99	90.503	ENSONIG00000007594	arf5	99	90.503	Oreochromis_niloticus
ENSGAFG00000005163	-	100	92.778	ENSONIG00000014890	-	100	92.778	Oreochromis_niloticus
ENSGAFG00000005163	-	99	86.034	ENSOCUG00000024365	ARF5	99	86.034	Oryctolagus_cuniculus
ENSGAFG00000005163	-	100	91.667	ENSORLG00020001755	-	100	91.667	Oryzias_latipes_hni
ENSGAFG00000005163	-	99	89.944	ENSOMEG00000020821	ARF5	99	89.944	Oryzias_melastigma
ENSGAFG00000005163	-	100	91.667	ENSOMEG00000000211	-	65	91.667	Oryzias_melastigma
ENSGAFG00000005163	-	99	86.034	ENSOGAG00000013336	ARF5	99	86.034	Otolemur_garnettii
ENSGAFG00000005163	-	99	86.034	ENSPPAG00000037755	ARF5	99	86.034	Pan_paniscus
ENSGAFG00000005163	-	99	86.034	ENSPPRG00000004674	ARF5	99	86.034	Panthera_pardus
ENSGAFG00000005163	-	99	86.034	ENSPTRG00000019651	ARF5	99	86.034	Pan_troglodytes
ENSGAFG00000005163	-	99	86.034	ENSPANG00000032970	ARF5	99	86.034	Papio_anubis
ENSGAFG00000005163	-	99	86.592	ENSPKIG00000025349	arf4a	99	86.592	Paramormyrops_kingsleyae
ENSGAFG00000005163	-	100	90.000	ENSPKIG00000013814	-	100	90.000	Paramormyrops_kingsleyae
ENSGAFG00000005163	-	99	89.385	ENSPKIG00000025381	-	99	89.385	Paramormyrops_kingsleyae
ENSGAFG00000005163	-	99	85.475	ENSPMGG00000009985	-	99	85.475	Periophthalmus_magnuspinnatus
ENSGAFG00000005163	-	99	86.034	ENSPEMG00000021476	Arf5	99	86.034	Peromyscus_maniculatus_bairdii
ENSGAFG00000005163	-	99	79.330	ENSPMAG00000009600	arf4a	100	79.330	Petromyzon_marinus
ENSGAFG00000005163	-	100	99.448	ENSPFOG00000017992	-	100	99.448	Poecilia_formosa
ENSGAFG00000005163	-	99	90.503	ENSPFOG00000015817	arf5	99	90.503	Poecilia_formosa
ENSGAFG00000005163	-	100	100.000	ENSPLAG00000015630	-	100	100.000	Poecilia_latipinna
ENSGAFG00000005163	-	99	90.503	ENSPLAG00000006742	arf5	99	90.503	Poecilia_latipinna
ENSGAFG00000005163	-	100	100.000	ENSPMEG00000004624	-	100	100.000	Poecilia_mexicana
ENSGAFG00000005163	-	99	90.503	ENSPMEG00000009605	arf5	99	90.503	Poecilia_mexicana
ENSGAFG00000005163	-	99	86.034	ENSPCOG00000027640	ARF5	99	86.034	Propithecus_coquereli
ENSGAFG00000005163	-	99	86.034	ENSPVAG00000013940	ARF5	99	86.034	Pteropus_vampyrus
ENSGAFG00000005163	-	100	92.778	ENSPNYG00000004931	-	100	92.778	Pundamilia_nyererei
ENSGAFG00000005163	-	99	90.503	ENSPNYG00000001663	arf5	99	90.503	Pundamilia_nyererei
ENSGAFG00000005163	-	99	90.503	ENSPNAG00000024427	-	99	90.503	Pygocentrus_nattereri
ENSGAFG00000005163	-	99	75.978	ENSPNAG00000005054	-	99	75.978	Pygocentrus_nattereri
ENSGAFG00000005163	-	99	86.592	ENSPNAG00000004745	arf4a	99	86.592	Pygocentrus_nattereri
ENSGAFG00000005163	-	99	71.508	ENSPNAG00000004475	-	99	71.508	Pygocentrus_nattereri
ENSGAFG00000005163	-	99	86.034	ENSRNOG00000007806	Arf5	99	86.034	Rattus_norvegicus
ENSGAFG00000005163	-	99	86.034	ENSRBIG00000039868	ARF5	99	86.034	Rhinopithecus_bieti
ENSGAFG00000005163	-	99	86.034	ENSRROG00000041157	ARF5	99	86.034	Rhinopithecus_roxellana
ENSGAFG00000005163	-	99	86.034	ENSSBOG00000021669	ARF5	99	86.034	Saimiri_boliviensis_boliviensis
ENSGAFG00000005163	-	99	86.034	ENSSHAG00000015053	ARF5	99	86.034	Sarcophilus_harrisii
ENSGAFG00000005163	-	99	91.620	ENSSFOG00015020707	ARF5	99	91.620	Scleropages_formosus
ENSGAFG00000005163	-	99	79.888	ENSSFOG00015007701	-	99	79.888	Scleropages_formosus
ENSGAFG00000005163	-	100	90.000	ENSSMAG00000004541	-	100	90.000	Scophthalmus_maximus
ENSGAFG00000005163	-	99	88.268	ENSSMAG00000011361	arf5	99	88.268	Scophthalmus_maximus
ENSGAFG00000005163	-	99	89.385	ENSSDUG00000005105	arf5	99	89.385	Seriola_dumerili
ENSGAFG00000005163	-	99	89.385	ENSSLDG00000017188	arf5	99	89.385	Seriola_lalandi_dorsalis
ENSGAFG00000005163	-	100	92.778	ENSSPAG00000022680	-	100	92.778	Stegastes_partitus
ENSGAFG00000005163	-	99	88.268	ENSSPAG00000014434	arf5	99	88.268	Stegastes_partitus
ENSGAFG00000005163	-	99	86.034	ENSSSCG00000016593	ARF5	99	86.034	Sus_scrofa
ENSGAFG00000005163	-	99	85.475	ENSTRUG00000025462	-	100	85.475	Takifugu_rubripes
ENSGAFG00000005163	-	99	83.240	ENSTNIG00000017954	-	100	83.240	Tetraodon_nigroviridis
ENSGAFG00000005163	-	99	88.827	ENSTNIG00000003348	arf5	100	88.827	Tetraodon_nigroviridis
ENSGAFG00000005163	-	89	86.957	ENSTTRG00000006043	ARF5	99	86.957	Tursiops_truncatus
ENSGAFG00000005163	-	99	86.034	ENSUAMG00000012982	ARF5	99	86.034	Ursus_americanus
ENSGAFG00000005163	-	99	86.034	ENSVVUG00000007062	ARF5	99	86.034	Vulpes_vulpes
ENSGAFG00000005163	-	100	100.000	ENSXCOG00000020384	-	100	100.000	Xiphophorus_couchianus
ENSGAFG00000005163	-	99	90.503	ENSXMAG00000015306	arf5	99	90.503	Xiphophorus_maculatus
ENSGAFG00000005163	-	100	100.000	ENSXMAG00000004558	-	100	100.000	Xiphophorus_maculatus