EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7404 bases
Position: chrNHOQ01001229.1:6036930-6044333
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007712	dsrm	PF00035.26	8.8e-22	1	2
ENSGAFP00000007712	dsrm	PF00035.26	8.8e-22	2	2
ENSGAFP00000007705	dsrm	PF00035.26	7.3e-21	1	2
ENSGAFP00000007705	dsrm	PF00035.26	7.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007792	-	1407	-	ENSGAFP00000007712	468 (aa)	-	-
ENSGAFT00000007797	-	645	-	ENSGAFP00000007717	214 (aa)	-	-
ENSGAFT00000007785	-	1416	-	ENSGAFP00000007705	471 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005231	-	99	42.436	ENSGAFG00000005269	-	95	48.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005231	-	99	41.667	ENSAPOG00000010706	eif2ak2	97	41.667	Acanthochromis_polyacanthus
ENSGAFG00000005231	-	97	65.385	ENSAPOG00000010662	eif2ak2	95	42.541	Acanthochromis_polyacanthus
ENSGAFG00000005231	-	99	39.796	ENSAPOG00000010636	-	98	41.837	Acanthochromis_polyacanthus
ENSGAFG00000005231	-	98	51.010	ENSACIG00000006710	-	95	51.010	Amphilophus_citrinellus
ENSGAFG00000005231	-	97	43.396	ENSACIG00000006777	eif2ak2	96	52.174	Amphilophus_citrinellus
ENSGAFG00000005231	-	97	51.736	ENSACIG00000007027	eif2ak2	82	55.147	Amphilophus_citrinellus
ENSGAFG00000005231	-	94	51.786	ENSACIG00000006536	eif2ak2	96	48.611	Amphilophus_citrinellus
ENSGAFG00000005231	-	77	50.133	ENSACIG00000006955	-	94	46.014	Amphilophus_citrinellus
ENSGAFG00000005231	-	98	65.385	ENSAOCG00000003397	eif2ak2	95	41.598	Amphiprion_ocellaris
ENSGAFG00000005231	-	99	40.404	ENSAOCG00000003414	-	98	40.535	Amphiprion_ocellaris
ENSGAFG00000005231	-	97	65.385	ENSAPEG00000023879	eif2ak2	95	41.649	Amphiprion_percula
ENSGAFG00000005231	-	99	43.704	ENSAPEG00000023675	eif2ak2	98	43.704	Amphiprion_percula
ENSGAFG00000005231	-	98	51.625	ENSATEG00000015063	eif2ak2	98	44.090	Anabas_testudineus
ENSGAFG00000005231	-	98	43.774	ENSATEG00000015425	eif2ak2	98	43.969	Anabas_testudineus
ENSGAFG00000005231	-	96	55.477	ENSATEG00000015535	eif2ak2	81	56.716	Anabas_testudineus
ENSGAFG00000005231	-	77	46.065	ENSACLG00000023843	-	97	45.602	Astatotilapia_calliptera
ENSGAFG00000005231	-	96	36.511	ENSAMXG00000003716	eif2ak2	92	40.260	Astyanax_mexicanus
ENSGAFG00000005231	-	91	54.400	ENSCSEG00000012820	-	98	44.737	Cynoglossus_semilaevis
ENSGAFG00000005231	-	99	35.026	ENSCSEG00000012878	eif2ak2	97	34.526	Cynoglossus_semilaevis
ENSGAFG00000005231	-	91	59.155	ENSCVAG00000014725	eif2ak2	96	59.155	Cyprinodon_variegatus
ENSGAFG00000005231	-	92	48.307	ENSCVAG00000003185	-	99	47.865	Cyprinodon_variegatus
ENSGAFG00000005231	-	92	45.489	ENSDARG00000068729	eif2ak2	78	45.635	Danio_rerio
ENSGAFG00000005231	-	60	49.223	ENSDARG00000052396	pkz	67	42.812	Danio_rerio
ENSGAFG00000005231	-	66	37.500	ENSELUG00000018078	-	67	37.500	Esox_lucius
ENSGAFG00000005231	-	96	50.000	ENSELUG00000018164	eif2ak2	89	42.105	Esox_lucius
ENSGAFG00000005231	-	96	35.512	ENSGMOG00000018784	eif2ak2	99	35.421	Gadus_morhua
ENSGAFG00000005231	-	86	36.385	ENSGMOG00000018813	eif2ak2	99	36.385	Gadus_morhua
ENSGAFG00000005231	-	98	54.651	ENSHBUG00000022151	-	93	40.862	Haplochromis_burtoni
ENSGAFG00000005231	-	84	41.230	ENSHBUG00000022216	-	88	41.230	Haplochromis_burtoni
ENSGAFG00000005231	-	99	39.844	ENSHCOG00000010443	-	99	39.844	Hippocampus_comes
ENSGAFG00000005231	-	98	41.525	ENSIPUG00000019933	eif2ak2	82	43.939	Ictalurus_punctatus
ENSGAFG00000005231	-	99	42.884	ENSMAMG00000017342	eif2ak2	97	43.152	Mastacembelus_armatus
ENSGAFG00000005231	-	99	43.326	ENSMAMG00000017311	eif2ak2	97	43.326	Mastacembelus_armatus
ENSGAFG00000005231	-	98	60.256	ENSMZEG00005009773	eif2ak2	97	47.677	Maylandia_zebra
ENSGAFG00000005231	-	96	50.877	ENSMZEG00005009825	eif2ak2	85	54.444	Maylandia_zebra
ENSGAFG00000005231	-	99	44.828	ENSMMOG00000000711	-	98	44.828	Mola_mola
ENSGAFG00000005231	-	97	74.026	ENSMALG00000005115	eif2ak2	97	47.260	Monopterus_albus
ENSGAFG00000005231	-	97	44.491	ENSMALG00000005083	eif2ak2	96	44.491	Monopterus_albus
ENSGAFG00000005231	-	99	47.143	ENSNBRG00000019433	-	97	47.143	Neolamprologus_brichardi
ENSGAFG00000005231	-	99	54.286	ENSNBRG00000011967	eif2ak2	98	46.170	Neolamprologus_brichardi
ENSGAFG00000005231	-	99	48.780	ENSNBRG00000012219	-	84	53.676	Neolamprologus_brichardi
ENSGAFG00000005231	-	98	51.639	ENSONIG00000010933	-	97	52.459	Oreochromis_niloticus
ENSGAFG00000005231	-	99	45.794	ENSORLG00000018980	-	82	50.185	Oryzias_latipes
ENSGAFG00000005231	-	99	43.276	ENSORLG00000012432	eif2ak2	97	47.500	Oryzias_latipes
ENSGAFG00000005231	-	91	45.578	ENSORLG00020014108	-	94	36.402	Oryzias_latipes_hni
ENSGAFG00000005231	-	99	45.489	ENSORLG00020014073	eif2ak2	98	45.298	Oryzias_latipes_hni
ENSGAFG00000005231	-	99	54.930	ENSORLG00015023149	eif2ak2	94	37.815	Oryzias_latipes_hsok
ENSGAFG00000005231	-	98	46.465	ENSORLG00015023155	eif2ak2	97	46.465	Oryzias_latipes_hsok
ENSGAFG00000005231	-	98	55.515	ENSOMEG00000019857	eif2ak2	96	48.750	Oryzias_melastigma
ENSGAFG00000005231	-	99	41.529	ENSOMEG00000019925	-	98	41.529	Oryzias_melastigma
ENSGAFG00000005231	-	58	36.648	ENSPKIG00000024012	pkz	58	36.228	Paramormyrops_kingsleyae
ENSGAFG00000005231	-	93	45.818	ENSPKIG00000024036	eif2ak2	82	38.147	Paramormyrops_kingsleyae
ENSGAFG00000005231	-	99	44.583	ENSPMGG00000001652	eif2ak2	98	44.970	Periophthalmus_magnuspinnatus
ENSGAFG00000005231	-	93	52.174	ENSPMGG00000001624	-	99	52.174	Periophthalmus_magnuspinnatus
ENSGAFG00000005231	-	98	50.000	ENSPLAG00000023307	-	95	54.237	Poecilia_latipinna
ENSGAFG00000005231	-	96	55.240	ENSPMEG00000013631	eif2ak2	99	55.240	Poecilia_mexicana
ENSGAFG00000005231	-	99	40.104	ENSPMEG00000013612	-	98	40.104	Poecilia_mexicana
ENSGAFG00000005231	-	99	55.842	ENSPREG00000007905	-	99	55.446	Poecilia_reticulata
ENSGAFG00000005231	-	99	42.348	ENSPNYG00000023883	-	97	42.227	Pundamilia_nyererei
ENSGAFG00000005231	-	100	42.418	ENSPNYG00000014187	eif2ak2	98	42.857	Pundamilia_nyererei
ENSGAFG00000005231	-	99	41.741	ENSPNYG00000014220	-	85	54.779	Pundamilia_nyererei
ENSGAFG00000005231	-	95	56.000	ENSPNAG00000000508	eif2ak2	98	38.068	Pygocentrus_nattereri
ENSGAFG00000005231	-	66	33.508	ENSSFOG00015008967	-	84	33.508	Scleropages_formosus
ENSGAFG00000005231	-	92	52.113	ENSSMAG00000010296	-	76	52.113	Scophthalmus_maximus
ENSGAFG00000005231	-	97	54.770	ENSSDUG00000002837	eif2ak2	83	55.431	Seriola_dumerili
ENSGAFG00000005231	-	99	39.839	ENSSDUG00000002922	eif2ak2	99	39.839	Seriola_dumerili
ENSGAFG00000005231	-	99	39.759	ENSSLDG00000024886	-	99	39.759	Seriola_lalandi_dorsalis
ENSGAFG00000005231	-	96	54.152	ENSSLDG00000024874	eif2ak2	98	41.919	Seriola_lalandi_dorsalis
ENSGAFG00000005231	-	98	45.865	ENSSLDG00000024893	-	97	45.865	Seriola_lalandi_dorsalis
ENSGAFG00000005231	-	85	38.200	ENSSPAG00000007476	-	81	38.200	Stegastes_partitus
ENSGAFG00000005231	-	98	42.300	ENSSPAG00000007629	-	92	42.505	Stegastes_partitus
ENSGAFG00000005231	-	99	40.644	ENSTRUG00000022205	-	100	40.644	Takifugu_rubripes
ENSGAFG00000005231	-	98	32.765	ENSXETG00000009025	pkr2	99	33.523	Xenopus_tropicalis
ENSGAFG00000005231	-	100	54.777	ENSXCOG00000006961	-	99	54.777	Xiphophorus_couchianus
ENSGAFG00000005231	-	92	41.667	ENSXMAG00000006521	eif2ak2	99	41.667	Xiphophorus_maculatus
ENSGAFG00000005231	-	100	55.372	ENSXMAG00000006536	eif2ak2	99	55.372	Xiphophorus_maculatus