EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAFG00000005241 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
7733 bases
Position
chrNHOQ01001795.1:11927-19659
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000007711CSDPF00313.221.2e-6614
ENSGAFP00000007711CSDPF00313.221.2e-6624
ENSGAFP00000007711CSDPF00313.221.2e-6634
ENSGAFP00000007711CSDPF00313.221.2e-6644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000007791-2070-ENSGAFP00000007711689 (aa)--
Gene Model
Click here to download ENSGAFG00000005241's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005241's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000005241csde19576.372ENSG00000009307CSDE110087.500Homo_sapiens
ENSGAFG00000005241csde19592.214ENSAPOG00000015538csde19492.214Acanthochromis_polyacanthus
ENSGAFG00000005241csde19575.762ENSAMEG00000017129CSDE18775.762Ailuropoda_melanoleuca
ENSGAFG00000005241csde19092.432ENSACIG00000015175csde110092.432Amphilophus_citrinellus
ENSGAFG00000005241csde19591.908ENSAOCG00000011510csde19491.908Amphiprion_ocellaris
ENSGAFG00000005241csde19592.061ENSAPEG00000007194csde19492.061Amphiprion_percula
ENSGAFG00000005241csde19590.534ENSATEG00000003864csde19490.534Anabas_testudineus
ENSGAFG00000005241csde19579.268ENSAPLG00000008797CSDE19279.268Anas_platyrhynchos
ENSGAFG00000005241csde19576.128ENSACAG00000003120CSDE19376.128Anolis_carolinensis
ENSGAFG00000005241csde19576.220ENSANAG00000024665CSDE19578.378Aotus_nancymaae
ENSGAFG00000005241csde17962.544ENSANAG00000028396-8862.544Aotus_nancymaae
ENSGAFG00000005241csde19592.214ENSACLG00000013296csde19492.214Astatotilapia_calliptera
ENSGAFG00000005241csde19585.997ENSAMXG00000007436csde19385.997Astyanax_mexicanus
ENSGAFG00000005241csde19575.915ENSBTAG00000000678CSDE19275.915Bos_taurus
ENSGAFG00000005241csde19576.220ENSCJAG00000012565CSDE18776.220Callithrix_jacchus
ENSGAFG00000005241csde19576.677ENSCAFG00000009618CSDE18976.677Canis_familiaris
ENSGAFG00000005241csde19576.677ENSCAFG00020000481CSDE19276.677Canis_lupus_dingo
ENSGAFG00000005241csde19576.067ENSCHIG00000017250CSDE19276.067Capra_hircus
ENSGAFG00000005241csde19576.677ENSTSYG00000003747CSDE19276.677Carlito_syrichta
ENSGAFG00000005241csde19550.655ENSCAPG00000015128CSDE18650.655Cavia_aperea
ENSGAFG00000005241csde19569.764ENSCPOG00000040388CSDE19269.764Cavia_porcellus
ENSGAFG00000005241csde19254.462ENSCCAG00000033677-8954.462Cebus_capucinus
ENSGAFG00000005241csde19576.220ENSCCAG00000036794CSDE19578.378Cebus_capucinus
ENSGAFG00000005241csde19153.274ENSCCAG00000030878-7953.274Cebus_capucinus
ENSGAFG00000005241csde19576.372ENSCATG00000036962CSDE19076.372Cercocebus_atys
ENSGAFG00000005241csde19576.524ENSCLAG00000006618CSDE19276.524Chinchilla_lanigera
ENSGAFG00000005241csde19572.926ENSCSAG00000001658CSDE18872.926Chlorocebus_sabaeus
ENSGAFG00000005241csde19575.647ENSCHOG00000000918CSDE17475.647Choloepus_hoffmanni
ENSGAFG00000005241csde19579.268ENSCPBG00000016547CSDE19279.268Chrysemys_picta_bellii
ENSGAFG00000005241csde19441.810ENSCING00000014465-9041.810Ciona_intestinalis
ENSGAFG00000005241csde19440.059ENSCSAVG00000008100-9440.059Ciona_savignyi
ENSGAFG00000005241csde19280.000ENSCANG00000031069-9480.000Colobus_angolensis_palliatus
ENSGAFG00000005241csde19576.372ENSCANG00000035096CSDE19076.372Colobus_angolensis_palliatus
ENSGAFG00000005241csde19860.087ENSCGRG00001014011-9060.087Cricetulus_griseus_chok1gshd
ENSGAFG00000005241csde19575.762ENSCGRG00001016833-9275.762Cricetulus_griseus_chok1gshd
ENSGAFG00000005241csde19169.345ENSCGRG00000002225-8769.345Cricetulus_griseus_crigri
ENSGAFG00000005241csde19873.913ENSCGRG00000005831-9273.913Cricetulus_griseus_crigri
ENSGAFG00000005241csde19589.160ENSCSEG00000002620csde19489.160Cynoglossus_semilaevis
ENSGAFG00000005241csde19596.794ENSCVAG00000001344csde19496.794Cyprinodon_variegatus
ENSGAFG00000005241csde19581.168ENSDARG00000074758csde110083.333Danio_rerio
ENSGAFG00000005241csde19576.712ENSDNOG00000010287-8676.712Dasypus_novemcinctus
ENSGAFG00000005241csde15851.630ENSDNOG00000034464-8551.630Dasypus_novemcinctus
ENSGAFG00000005241csde19474.506ENSDORG00000011609Csde19174.506Dipodomys_ordii
ENSGAFG00000005241csde19448.875FBgn0263352Unr8048.008Drosophila_melanogaster
ENSGAFG00000005241csde18953.099ENSETEG00000007109-8153.099Echinops_telfairi
ENSGAFG00000005241csde19560.000ENSETEG00000013678-8560.000Echinops_telfairi
ENSGAFG00000005241csde19268.976ENSETEG00000006280-10068.976Echinops_telfairi
ENSGAFG00000005241csde19581.481ENSETEG00000002491-7465.109Echinops_telfairi
ENSGAFG00000005241csde19552.489ENSEBUG00000008647csde19650.617Eptatretus_burgeri
ENSGAFG00000005241csde19576.829ENSEASG00005006284CSDE19373.362Equus_asinus_asinus
ENSGAFG00000005241csde19576.829ENSECAG00000020885CSDE19176.539Equus_caballus
ENSGAFG00000005241csde19582.866ENSEEUG00000006286CSDE16682.866Erinaceus_europaeus
ENSGAFG00000005241csde19584.370ENSELUG00000015507csde19484.370Esox_lucius
ENSGAFG00000005241csde19576.677ENSFCAG00000029266CSDE19276.677Felis_catus
ENSGAFG00000005241csde19575.837ENSFALG00000003407CSDE19375.837Ficedula_albicollis
ENSGAFG00000005241csde19474.865ENSFDAG00000007882CSDE19174.865Fukomys_damarensis
ENSGAFG00000005241csde19596.947ENSFHEG00000010799csde19696.947Fundulus_heteroclitus
ENSGAFG00000005241csde19583.212ENSGMOG00000012731csde19583.212Gadus_morhua
ENSGAFG00000005241csde19575.546ENSGALG00000002139CSDE19375.546Gallus_gallus
ENSGAFG00000005241csde19587.427ENSGACG00000004544csde19587.427Gasterosteus_aculeatus
ENSGAFG00000005241csde19578.963ENSGAGG00000017685CSDE19375.400Gopherus_agassizii
ENSGAFG00000005241csde19576.372ENSGGOG00000002164CSDE19578.041Gorilla_gorilla
ENSGAFG00000005241csde19592.214ENSHBUG00000020315csde19492.214Haplochromis_burtoni
ENSGAFG00000005241csde19566.260ENSHGLG00000007471-9066.260Heterocephalus_glaber_female
ENSGAFG00000005241csde19166.071ENSHGLG00000010039-8666.071Heterocephalus_glaber_female
ENSGAFG00000005241csde19561.821ENSHGLG00000019549-9061.821Heterocephalus_glaber_female
ENSGAFG00000005241csde19567.683ENSHGLG00000003829-9267.683Heterocephalus_glaber_female
ENSGAFG00000005241csde19373.411ENSHGLG00000009620-8073.411Heterocephalus_glaber_female
ENSGAFG00000005241csde19556.122ENSHGLG00000000650-8356.122Heterocephalus_glaber_female
ENSGAFG00000005241csde19168.043ENSHGLG00000008555-9868.043Heterocephalus_glaber_female
ENSGAFG00000005241csde19576.220ENSHGLG00100019438-9276.220Heterocephalus_glaber_male
ENSGAFG00000005241csde19564.177ENSHGLG00100012072-9364.177Heterocephalus_glaber_male
ENSGAFG00000005241csde19565.554ENSHGLG00100007287-8565.554Heterocephalus_glaber_male
ENSGAFG00000005241csde19561.585ENSHGLG00100001846-9461.585Heterocephalus_glaber_male
ENSGAFG00000005241csde19165.774ENSHGLG00100006910-8665.774Heterocephalus_glaber_male
ENSGAFG00000005241csde19157.440ENSHGLG00100004833-8957.440Heterocephalus_glaber_male
ENSGAFG00000005241csde19559.942ENSHGLG00100002245-8459.942Heterocephalus_glaber_male
ENSGAFG00000005241csde19563.720ENSHGLG00100004195-9963.720Heterocephalus_glaber_male
ENSGAFG00000005241csde19589.466ENSHCOG00000004158csde19489.466Hippocampus_comes
ENSGAFG00000005241csde19584.475ENSIPUG00000000355csde19484.475Ictalurus_punctatus
ENSGAFG00000005241csde19561.493ENSSTOG00000030994-9061.493Ictidomys_tridecemlineatus
ENSGAFG00000005241csde19561.111ENSSTOG00000032722-9961.111Ictidomys_tridecemlineatus
ENSGAFG00000005241csde19474.686ENSJJAG00000019571Csde19174.686Jaculus_jaculus
ENSGAFG00000005241csde19588.081ENSKMAG00000005685csde19587.572Kryptolebias_marmoratus
ENSGAFG00000005241csde19592.061ENSLBEG00000014770csde19492.061Labrus_bergylta
ENSGAFG00000005241csde19175.492ENSLACG00000018452CSDE17775.492Latimeria_chalumnae
ENSGAFG00000005241csde19581.140ENSLOCG00000010413csde18981.140Lepisosteus_oculatus
ENSGAFG00000005241csde19575.915ENSLAFG00000007150CSDE18975.915Loxodonta_africana
ENSGAFG00000005241csde19576.372ENSMFAG00000003674CSDE19276.372Macaca_fascicularis
ENSGAFG00000005241csde19576.372ENSMMUG00000001974CSDE19976.372Macaca_mulatta
ENSGAFG00000005241csde19576.372ENSMNEG00000045247CSDE19076.372Macaca_nemestrina
ENSGAFG00000005241csde19576.372ENSMLEG00000038673CSDE18776.372Mandrillus_leucophaeus
ENSGAFG00000005241csde19592.366ENSMAMG00000008821csde19492.366Mastacembelus_armatus
ENSGAFG00000005241csde19592.214ENSMZEG00005021675csde19492.214Maylandia_zebra
ENSGAFG00000005241csde19578.995ENSMGAG00000016381CSDE19278.995Meleagris_gallopavo
ENSGAFG00000005241csde19474.506ENSMAUG00000014031Csde19174.506Mesocricetus_auratus
ENSGAFG00000005241csde19576.524ENSMICG00000002050CSDE18876.453Microcebus_murinus
ENSGAFG00000005241csde19575.762ENSMOCG00000018960Csde19275.762Microtus_ochrogaster
ENSGAFG00000005241csde19592.214ENSMMOG00000015075csde19492.214Mola_mola
ENSGAFG00000005241csde19577.204ENSMODG00000004685CSDE19374.527Monodelphis_domestica
ENSGAFG00000005241csde19591.756ENSMALG00000007132csde19491.756Monopterus_albus
ENSGAFG00000005241csde19575.915MGP_CAROLIEiJ_G0025444Csde110086.755Mus_caroli
ENSGAFG00000005241csde19575.762ENSMUSG00000068823Csde110086.755Mus_musculus
ENSGAFG00000005241csde19575.762MGP_PahariEiJ_G0026888Csde110086.755Mus_pahari
ENSGAFG00000005241csde19575.762MGP_SPRETEiJ_G0026394Csde110086.755Mus_spretus
ENSGAFG00000005241csde19573.217ENSMPUG00000005753CSDE19473.217Mustela_putorius_furo
ENSGAFG00000005241csde19575.915ENSMLUG00000005681CSDE18775.915Myotis_lucifugus
ENSGAFG00000005241csde19474.327ENSNGAG00000021929Csde19174.327Nannospalax_galili
ENSGAFG00000005241csde19148.810ENSNGAG00000012599-8248.810Nannospalax_galili
ENSGAFG00000005241csde19592.214ENSNBRG00000020808csde19492.214Neolamprologus_brichardi
ENSGAFG00000005241csde19576.372ENSNLEG00000004842CSDE19578.041Nomascus_leucogenys
ENSGAFG00000005241csde19573.933ENSMEUG00000002677CSDE19473.933Notamacropus_eugenii
ENSGAFG00000005241csde19566.912ENSOPRG00000005002CSDE17766.912Ochotona_princeps
ENSGAFG00000005241csde19151.327ENSODEG00000005979-7351.327Octodon_degus
ENSGAFG00000005241csde19474.686ENSODEG00000007383-9174.686Octodon_degus
ENSGAFG00000005241csde19585.775ENSONIG00000009309csde19385.775Oreochromis_niloticus
ENSGAFG00000005241csde19376.040ENSOANG00000003346-7676.040Ornithorhynchus_anatinus
ENSGAFG00000005241csde19576.067ENSOCUG00000016438CSDE18776.067Oryctolagus_cuniculus
ENSGAFG00000005241csde19590.687ENSORLG00000000707csde19490.687Oryzias_latipes
ENSGAFG00000005241csde19586.550ENSORLG00020005148csde19384.211Oryzias_latipes_hni
ENSGAFG00000005241csde19590.534ENSORLG00015019415csde19490.534Oryzias_latipes_hsok
ENSGAFG00000005241csde19589.160ENSOMEG00000015656csde19490.076Oryzias_melastigma
ENSGAFG00000005241csde19576.524ENSOGAG00000012127CSDE18776.524Otolemur_garnettii
ENSGAFG00000005241csde19576.067ENSOARG00000020034CSDE18776.067Ovis_aries
ENSGAFG00000005241csde19576.372ENSPPAG00000025861CSDE19578.041Pan_paniscus
ENSGAFG00000005241csde19576.677ENSPPRG00000006747CSDE18776.677Panthera_pardus
ENSGAFG00000005241csde19576.677ENSPTIG00000015468CSDE19373.217Panthera_tigris_altaica
ENSGAFG00000005241csde19576.372ENSPTRG00000033721CSDE19578.041Pan_troglodytes
ENSGAFG00000005241csde19576.372ENSPANG00000018873CSDE19276.372Papio_anubis
ENSGAFG00000005241csde19584.122ENSPKIG00000009459csde19484.122Paramormyrops_kingsleyae
ENSGAFG00000005241csde19377.753ENSPSIG00000003823CSDE19677.753Pelodiscus_sinensis
ENSGAFG00000005241csde19588.855ENSPMGG00000000772csde19388.855Periophthalmus_magnuspinnatus
ENSGAFG00000005241csde19474.686ENSPEMG00000020357-9174.686Peromyscus_maniculatus_bairdii
ENSGAFG00000005241csde19574.672ENSPCIG00000022587CSDE19374.672Phascolarctos_cinereus
ENSGAFG00000005241csde19298.370ENSPFOG00000012664csde19397.543Poecilia_formosa
ENSGAFG00000005241csde19291.486ENSPLAG00000017680csde18791.486Poecilia_latipinna
ENSGAFG00000005241csde19291.848ENSPMEG00000005094csde18991.848Poecilia_mexicana
ENSGAFG00000005241csde19594.041ENSPREG00000011631csde19590.363Poecilia_reticulata
ENSGAFG00000005241csde19572.780ENSPPYG00000000996CSDE19372.780Pongo_abelii
ENSGAFG00000005241csde19572.713ENSPCAG00000014368CSDE18772.713Procavia_capensis
ENSGAFG00000005241csde19576.677ENSPCOG00000017893CSDE19970.579Propithecus_coquereli
ENSGAFG00000005241csde19271.004ENSPCOG00000008223-9171.004Propithecus_coquereli
ENSGAFG00000005241csde19576.220ENSPVAG00000008225CSDE18776.220Pteropus_vampyrus
ENSGAFG00000005241csde19592.214ENSPNYG00000013745csde19492.214Pundamilia_nyererei
ENSGAFG00000005241csde19587.062ENSPNAG00000001958csde19387.062Pygocentrus_nattereri
ENSGAFG00000005241csde19572.198ENSRNOG00000061058Csde19372.198Rattus_norvegicus
ENSGAFG00000005241csde19573.212ENSRBIG00000038088-9573.212Rhinopithecus_bieti
ENSGAFG00000005241csde19572.644ENSRBIG00000038966-7780.303Rhinopithecus_bieti
ENSGAFG00000005241csde19576.372ENSRROG00000043101CSDE19076.372Rhinopithecus_roxellana
ENSGAFG00000005241csde19576.220ENSSBOG00000035592CSDE18876.220Saimiri_boliviensis_boliviensis
ENSGAFG00000005241csde19578.201ENSSHAG00000009831CSDE19278.201Sarcophilus_harrisii
ENSGAFG00000005241csde19583.384ENSSFOG00015007498csde19483.384Scleropages_formosus
ENSGAFG00000005241csde19590.992ENSSMAG00000007203csde19490.992Scophthalmus_maximus
ENSGAFG00000005241csde19592.824ENSSDUG00000015380csde19492.824Seriola_dumerili
ENSGAFG00000005241csde19592.824ENSSLDG00000008819csde19492.824Seriola_lalandi_dorsalis
ENSGAFG00000005241csde19576.067ENSSARG00000000738CSDE18776.067Sorex_araneus
ENSGAFG00000005241csde19579.878ENSSPUG00000008714CSDE19279.878Sphenodon_punctatus
ENSGAFG00000005241csde19592.977ENSSPAG00000000716csde19492.977Stegastes_partitus
ENSGAFG00000005241csde19875.000ENSSSCG00000006752CSDE19575.000Sus_scrofa
ENSGAFG00000005241csde19574.891ENSTGUG00000000972CSDE19374.891Taeniopygia_guttata
ENSGAFG00000005241csde19586.565ENSTRUG00000007996csde19386.565Takifugu_rubripes
ENSGAFG00000005241csde18083.525ENSTNIG00000010878csde110083.525Tetraodon_nigroviridis
ENSGAFG00000005241csde19575.915ENSTTRG00000015583CSDE18775.915Tursiops_truncatus
ENSGAFG00000005241csde19283.062ENSUAMG00000021779-9883.062Ursus_americanus
ENSGAFG00000005241csde19472.819ENSUAMG00000024289-9872.819Ursus_americanus
ENSGAFG00000005241csde19571.189ENSUMAG00000009720-9571.189Ursus_maritimus
ENSGAFG00000005241csde18068.182ENSUMAG00000011714-8568.182Ursus_maritimus
ENSGAFG00000005241csde19580.930ENSVPAG00000000749CSDE16580.930Vicugna_pacos
ENSGAFG00000005241csde19573.256ENSVVUG00000009890CSDE19473.256Vulpes_vulpes
ENSGAFG00000005241csde19574.493ENSXETG00000021448csde19174.493Xenopus_tropicalis
ENSGAFG00000005241csde19399.564ENSXCOG00000000035csde17699.564Xiphophorus_couchianus
ENSGAFG00000005241csde19599.389ENSXMAG00000009080csde19499.389Xiphophorus_maculatus

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