EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005278 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 28750 bases
Position: chrNHOQ01000739.1:3245104-3273853
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	1	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	2	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	3	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	4	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	5	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	6	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	7	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	8	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	9	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	10	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	11	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	12	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	13	14
ENSGAFP00000007768	KH_1	PF00013.29	3.4e-189	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007849	-	4036	-	ENSGAFP00000007768	1268 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005278	hdlbpb	100	50.863	ENSGAFG00000016766	hdlbpa	100	50.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005278	hdlbpb	100	95.584	ENSAPOG00000006904	hdlbpb	100	95.584	Acanthochromis_polyacanthus
ENSGAFG00000005278	hdlbpb	100	90.188	ENSACIG00000016154	hdlbpb	100	90.188	Amphilophus_citrinellus
ENSGAFG00000005278	hdlbpb	100	96.215	ENSAOCG00000004083	hdlbpb	100	96.215	Amphiprion_ocellaris
ENSGAFG00000005278	hdlbpb	100	96.136	ENSAPEG00000012270	hdlbpb	100	96.136	Amphiprion_percula
ENSGAFG00000005278	hdlbpb	100	95.584	ENSATEG00000019877	hdlbpb	100	95.584	Anabas_testudineus
ENSGAFG00000005278	hdlbpb	100	82.177	ENSACAG00000003606	-	100	82.177	Anolis_carolinensis
ENSGAFG00000005278	hdlbpb	100	95.662	ENSACLG00000006618	hdlbpb	100	95.662	Astatotilapia_calliptera
ENSGAFG00000005278	hdlbpb	100	77.577	ENSAMXG00000019946	hdlbpb	100	77.577	Astyanax_mexicanus
ENSGAFG00000005278	hdlbpb	100	94.716	ENSCSEG00000000955	hdlbpb	100	94.716	Cynoglossus_semilaevis
ENSGAFG00000005278	hdlbpb	100	97.161	ENSCVAG00000005345	hdlbpb	100	97.161	Cyprinodon_variegatus
ENSGAFG00000005278	hdlbpb	99	85.241	ENSDARG00000061864	hdlbpb	99	85.241	Danio_rerio
ENSGAFG00000005278	hdlbpb	92	69.915	ENSEBUG00000005304	hdlbpb	96	69.744	Eptatretus_burgeri
ENSGAFG00000005278	hdlbpb	100	66.695	ENSELUG00000019925	hdlbpb	100	77.865	Esox_lucius
ENSGAFG00000005278	hdlbpb	87	34.870	ENSFHEG00000001701	hdlbpb	100	92.508	Fundulus_heteroclitus
ENSGAFG00000005278	hdlbpb	95	87.362	ENSGMOG00000004522	hdlbpb	78	87.362	Gadus_morhua
ENSGAFG00000005278	hdlbpb	99	91.555	ENSGACG00000019361	hdlbpb	100	91.792	Gasterosteus_aculeatus
ENSGAFG00000005278	hdlbpb	100	95.505	ENSHBUG00000018434	hdlbpb	100	95.505	Haplochromis_burtoni
ENSGAFG00000005278	hdlbpb	100	85.354	ENSIPUG00000003291	HDLBP	100	85.963	Ictalurus_punctatus
ENSGAFG00000005278	hdlbpb	100	96.372	ENSKMAG00000016562	hdlbpb	100	96.372	Kryptolebias_marmoratus
ENSGAFG00000005278	hdlbpb	100	94.874	ENSLBEG00000027855	hdlbpb	100	94.874	Labrus_bergylta
ENSGAFG00000005278	hdlbpb	100	85.075	ENSLACG00000007661	hdlbpb	92	85.075	Latimeria_chalumnae
ENSGAFG00000005278	hdlbpb	100	82.742	ENSLOCG00000013909	hdlbpb	100	82.742	Lepisosteus_oculatus
ENSGAFG00000005278	hdlbpb	100	95.741	ENSMAMG00000003035	hdlbpb	100	95.741	Mastacembelus_armatus
ENSGAFG00000005278	hdlbpb	100	95.662	ENSMZEG00005021465	hdlbpb	100	95.662	Maylandia_zebra
ENSGAFG00000005278	hdlbpb	100	93.770	ENSMMOG00000012525	hdlbpb	100	94.085	Mola_mola
ENSGAFG00000005278	hdlbpb	100	93.375	ENSMALG00000008938	hdlbpb	100	93.375	Monopterus_albus
ENSGAFG00000005278	hdlbpb	100	95.741	ENSNBRG00000002236	hdlbpb	100	95.741	Neolamprologus_brichardi
ENSGAFG00000005278	hdlbpb	100	95.426	ENSONIG00000009211	hdlbpb	100	95.426	Oreochromis_niloticus
ENSGAFG00000005278	hdlbpb	100	94.953	ENSORLG00000006581	hdlbpb	100	94.953	Oryzias_latipes
ENSGAFG00000005278	hdlbpb	100	95.189	ENSORLG00020010012	hdlbpb	100	95.189	Oryzias_latipes_hni
ENSGAFG00000005278	hdlbpb	100	95.347	ENSORLG00015006863	hdlbpb	100	95.347	Oryzias_latipes_hsok
ENSGAFG00000005278	hdlbpb	100	95.189	ENSOMEG00000011131	hdlbpb	100	95.189	Oryzias_melastigma
ENSGAFG00000005278	hdlbpb	100	88.644	ENSPKIG00000005966	hdlbpb	100	88.722	Paramormyrops_kingsleyae
ENSGAFG00000005278	hdlbpb	86	94.167	ENSPMGG00000019853	hdlbpb	99	94.167	Periophthalmus_magnuspinnatus
ENSGAFG00000005278	hdlbpb	94	74.452	ENSPMAG00000002131	hdlbpb	100	74.452	Petromyzon_marinus
ENSGAFG00000005278	hdlbpb	92	65.232	ENSPMAG00000000249	-	99	65.064	Petromyzon_marinus
ENSGAFG00000005278	hdlbpb	100	97.894	ENSPFOG00000008755	hdlbpb	100	97.894	Poecilia_formosa
ENSGAFG00000005278	hdlbpb	100	98.975	ENSPLAG00000007055	hdlbpb	100	98.975	Poecilia_latipinna
ENSGAFG00000005278	hdlbpb	100	98.896	ENSPMEG00000001952	hdlbpb	100	98.896	Poecilia_mexicana
ENSGAFG00000005278	hdlbpb	100	98.817	ENSPREG00000012848	hdlbpb	100	98.817	Poecilia_reticulata
ENSGAFG00000005278	hdlbpb	100	95.505	ENSPNYG00000022467	hdlbpb	100	95.505	Pundamilia_nyererei
ENSGAFG00000005278	hdlbpb	100	87.224	ENSPNAG00000011104	hdlbpb	100	87.224	Pygocentrus_nattereri
ENSGAFG00000005278	hdlbpb	100	87.539	ENSSFOG00015023199	hdlbpb	100	87.539	Scleropages_formosus
ENSGAFG00000005278	hdlbpb	100	95.189	ENSSMAG00000008790	hdlbpb	100	95.189	Scophthalmus_maximus
ENSGAFG00000005278	hdlbpb	100	96.057	ENSSDUG00000020694	hdlbpb	100	96.057	Seriola_dumerili
ENSGAFG00000005278	hdlbpb	100	95.584	ENSSLDG00000020807	hdlbpb	100	95.584	Seriola_lalandi_dorsalis
ENSGAFG00000005278	hdlbpb	100	82.571	ENSSPUG00000018688	-	100	82.571	Sphenodon_punctatus
ENSGAFG00000005278	hdlbpb	100	96.215	ENSSPAG00000016969	hdlbpb	100	96.215	Stegastes_partitus
ENSGAFG00000005278	hdlbpb	98	91.924	ENSTRUG00000012888	hdlbpb	99	91.924	Takifugu_rubripes
ENSGAFG00000005278	hdlbpb	99	93.109	ENSTNIG00000002555	hdlbpb	100	93.109	Tetraodon_nigroviridis
ENSGAFG00000005278	hdlbpb	100	85.291	ENSXCOG00000001797	hdlbpb	100	85.291	Xiphophorus_couchianus
ENSGAFG00000005278	hdlbpb	100	98.975	ENSXMAG00000015633	hdlbpb	100	98.975	Xiphophorus_maculatus