EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005290 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10753 bases
Position: chrNHOQ01000199.1:1485714-1496466
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007774	RNase_Zc3h12a	PF11977.8	2.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007855	-	3645	-	ENSGAFP00000007774	922 (aa)	-	UPI000DD1BF9A

Gene Model

Click here to download ENSGAFG00000005290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005290	-	87	47.312	ENSGAFG00000004701	-	99	43.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005290	-	85	48.438	ENSAPOG00000001632	-	77	73.964	Acanthochromis_polyacanthus
ENSGAFG00000005290	-	79	77.441	ENSAPOG00000015355	-	82	77.704	Acanthochromis_polyacanthus
ENSGAFG00000005290	-	100	66.066	ENSACIG00000001362	-	97	68.182	Amphilophus_citrinellus
ENSGAFG00000005290	-	99	75.934	ENSAOCG00000003866	-	99	80.515	Amphiprion_ocellaris
ENSGAFG00000005290	-	100	70.397	ENSAPEG00000005727	-	99	81.141	Amphiprion_percula
ENSGAFG00000005290	-	74	74.747	ENSAPEG00000018582	-	99	80.702	Amphiprion_percula
ENSGAFG00000005290	-	52	75.072	ENSATEG00000002260	-	91	74.609	Anabas_testudineus
ENSGAFG00000005290	-	100	73.841	ENSATEG00000004134	-	100	74.665	Anabas_testudineus
ENSGAFG00000005290	-	100	73.895	ENSACLG00000027924	-	100	74.333	Astatotilapia_calliptera
ENSGAFG00000005290	-	64	52.970	ENSACLG00000018493	-	65	53.084	Astatotilapia_calliptera
ENSGAFG00000005290	-	87	70.933	ENSCSEG00000010073	-	96	79.359	Cynoglossus_semilaevis
ENSGAFG00000005290	-	52	57.600	ENSCSEG00000008542	-	68	51.491	Cynoglossus_semilaevis
ENSGAFG00000005290	-	100	82.664	ENSCVAG00000002328	-	100	82.558	Cyprinodon_variegatus
ENSGAFG00000005290	-	85	55.748	ENSELUG00000009319	-	96	55.019	Esox_lucius
ENSGAFG00000005290	-	65	53.698	ENSELUG00000005470	-	100	46.531	Esox_lucius
ENSGAFG00000005290	-	92	93.878	ENSFHEG00000021225	-	100	93.878	Fundulus_heteroclitus
ENSGAFG00000005290	-	74	45.000	ENSGMOG00000017975	-	100	45.180	Gadus_morhua
ENSGAFG00000005290	-	74	69.388	ENSGACG00000014201	-	100	70.262	Gasterosteus_aculeatus
ENSGAFG00000005290	-	74	45.977	ENSGACG00000001339	-	99	44.907	Gasterosteus_aculeatus
ENSGAFG00000005290	-	100	73.690	ENSHBUG00000006831	-	100	74.230	Haplochromis_burtoni
ENSGAFG00000005290	-	100	62.236	ENSHCOG00000008878	-	99	85.417	Hippocampus_comes
ENSGAFG00000005290	-	100	76.801	ENSKMAG00000011694	-	100	77.542	Kryptolebias_marmoratus
ENSGAFG00000005290	-	65	53.612	ENSLBEG00000012710	-	99	43.421	Labrus_bergylta
ENSGAFG00000005290	-	97	72.115	ENSLBEG00000012554	-	99	77.861	Labrus_bergylta
ENSGAFG00000005290	-	100	73.018	ENSLBEG00000003547	-	100	73.765	Labrus_bergylta
ENSGAFG00000005290	-	51	62.291	ENSLACG00000017365	ZC3H12A	57	62.994	Latimeria_chalumnae
ENSGAFG00000005290	-	93	74.598	ENSMAMG00000021794	-	94	85.621	Mastacembelus_armatus
ENSGAFG00000005290	-	65	53.698	ENSMAMG00000020372	-	99	44.136	Mastacembelus_armatus
ENSGAFG00000005290	-	80	52.970	ENSMZEG00005019137	-	90	65.385	Maylandia_zebra
ENSGAFG00000005290	-	100	73.895	ENSMZEG00005007718	-	100	74.333	Maylandia_zebra
ENSGAFG00000005290	-	94	71.715	ENSMMOG00000005728	-	99	76.549	Mola_mola
ENSGAFG00000005290	-	100	72.596	ENSMALG00000010501	-	100	73.113	Monopterus_albus
ENSGAFG00000005290	-	64	51.364	ENSNBRG00000012175	-	90	67.974	Neolamprologus_brichardi
ENSGAFG00000005290	-	100	73.690	ENSNBRG00000006978	-	100	74.127	Neolamprologus_brichardi
ENSGAFG00000005290	-	100	74.101	ENSONIG00000012268	-	100	74.846	Oreochromis_niloticus
ENSGAFG00000005290	-	86	74.876	ENSORLG00000029243	-	97	75.589	Oryzias_latipes
ENSGAFG00000005290	-	100	71.291	ENSORLG00020017005	-	100	71.855	Oryzias_latipes_hni
ENSGAFG00000005290	-	100	70.488	ENSORLG00015015211	-	100	71.231	Oryzias_latipes_hsok
ENSGAFG00000005290	-	100	70.347	ENSOMEG00000006666	-	100	71.519	Oryzias_melastigma
ENSGAFG00000005290	-	64	79.743	ENSPMGG00000009790	-	98	80.064	Periophthalmus_magnuspinnatus
ENSGAFG00000005290	-	52	57.084	ENSPMGG00000020126	-	51	58.664	Periophthalmus_magnuspinnatus
ENSGAFG00000005290	-	100	92.184	ENSPLAG00000009867	-	100	92.612	Poecilia_latipinna
ENSGAFG00000005290	-	100	92.291	ENSPMEG00000006624	-	100	92.827	Poecilia_mexicana
ENSGAFG00000005290	-	99	43.648	ENSPMEG00000011676	-	99	42.170	Poecilia_mexicana
ENSGAFG00000005290	-	89	46.253	ENSPREG00000001607	-	74	77.974	Poecilia_reticulata
ENSGAFG00000005290	-	100	92.819	ENSPREG00000010838	-	100	93.248	Poecilia_reticulata
ENSGAFG00000005290	-	100	74.611	ENSSMAG00000007545	-	100	74.508	Scophthalmus_maximus
ENSGAFG00000005290	-	85	48.703	ENSSMAG00000007258	-	99	43.448	Scophthalmus_maximus
ENSGAFG00000005290	-	100	75.975	ENSSDUG00000021864	-	100	76.181	Seriola_dumerili
ENSGAFG00000005290	-	99	45.863	ENSSDUG00000013237	-	91	65.772	Seriola_dumerili
ENSGAFG00000005290	-	99	46.418	ENSSLDG00000004886	-	99	44.303	Seriola_lalandi_dorsalis
ENSGAFG00000005290	-	100	75.873	ENSSLDG00000012268	-	100	75.770	Seriola_lalandi_dorsalis
ENSGAFG00000005290	-	99	45.804	ENSSPAG00000001850	-	99	43.932	Stegastes_partitus
ENSGAFG00000005290	-	100	75.128	ENSSPAG00000009485	-	100	76.181	Stegastes_partitus
ENSGAFG00000005290	-	99	71.144	ENSTRUG00000022519	-	99	71.174	Takifugu_rubripes
ENSGAFG00000005290	-	75	67.286	ENSTNIG00000014519	-	100	83.453	Tetraodon_nigroviridis
ENSGAFG00000005290	-	99	43.679	ENSXMAG00000014715	-	84	78.788	Xiphophorus_maculatus
ENSGAFG00000005290	-	100	93.891	ENSXMAG00000027171	-	100	94.319	Xiphophorus_maculatus