EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005311 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: APEX nuclease (multifunctional DNA repair enzyme) 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5766 bases
Position: chrNHOQ01002778.1:700355-706120
Accession: ZDB-GENE-040426-2761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007807	Exo_endo_phos	PF03372.23	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007888	-	4214	-	ENSGAFP00000007807	310 (aa)	-	UPI000DD1D5EB

Gene Model

Click here to download ENSGAFG00000005311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005311	apex1	99	67.089	ENSG00000100823	APEX1	99	67.089	Homo_sapiens
ENSGAFG00000005311	apex1	100	91.290	ENSAPOG00000017002	apex1	100	91.290	Acanthochromis_polyacanthus
ENSGAFG00000005311	apex1	99	67.405	ENSAMEG00000005418	APEX1	88	72.043	Ailuropoda_melanoleuca
ENSGAFG00000005311	apex1	89	91.697	ENSACIG00000010653	apex1	95	91.786	Amphilophus_citrinellus
ENSGAFG00000005311	apex1	100	90.645	ENSAOCG00000009649	apex1	100	90.645	Amphiprion_ocellaris
ENSGAFG00000005311	apex1	100	90.968	ENSAPEG00000021453	apex1	100	90.968	Amphiprion_percula
ENSGAFG00000005311	apex1	99	92.557	ENSATEG00000002883	apex1	97	92.557	Anabas_testudineus
ENSGAFG00000005311	apex1	90	73.214	ENSACAG00000008099	APEX1	88	73.214	Anolis_carolinensis
ENSGAFG00000005311	apex1	99	67.405	ENSANAG00000030117	APEX1	99	67.405	Aotus_nancymaae
ENSGAFG00000005311	apex1	100	91.613	ENSACLG00000018441	apex1	100	91.613	Astatotilapia_calliptera
ENSGAFG00000005311	apex1	99	85.484	ENSAMXG00000034699	apex1	99	85.161	Astyanax_mexicanus
ENSGAFG00000005311	apex1	99	66.772	ENSBTAG00000002745	APEX1	88	71.326	Bos_taurus
ENSGAFG00000005311	apex1	91	42.456	WBGene00001372	exo-3	92	43.609	Caenorhabditis_elegans
ENSGAFG00000005311	apex1	99	67.405	ENSCJAG00000009726	APEX1	88	72.401	Callithrix_jacchus
ENSGAFG00000005311	apex1	99	67.405	ENSCAFG00000032033	APEX1	88	72.401	Canis_familiaris
ENSGAFG00000005311	apex1	53	60.588	ENSCAFG00020023002	-	74	69.173	Canis_lupus_dingo
ENSGAFG00000005311	apex1	99	67.405	ENSCAFG00020014377	-	88	72.401	Canis_lupus_dingo
ENSGAFG00000005311	apex1	87	57.196	ENSCHIG00000014537	-	89	56.115	Capra_hircus
ENSGAFG00000005311	apex1	99	66.772	ENSCHIG00000007298	-	88	71.326	Capra_hircus
ENSGAFG00000005311	apex1	99	66.139	ENSTSYG00000034813	APEX1	88	70.968	Carlito_syrichta
ENSGAFG00000005311	apex1	93	63.793	ENSCAPG00000016235	APEX1	91	72.034	Cavia_aperea
ENSGAFG00000005311	apex1	99	67.405	ENSCPOG00000030909	APEX1	88	72.401	Cavia_porcellus
ENSGAFG00000005311	apex1	99	58.861	ENSCCAG00000031931	-	99	58.861	Cebus_capucinus
ENSGAFG00000005311	apex1	99	67.405	ENSCCAG00000033056	-	88	72.401	Cebus_capucinus
ENSGAFG00000005311	apex1	99	66.772	ENSCATG00000015580	APEX1	99	66.772	Cercocebus_atys
ENSGAFG00000005311	apex1	99	67.089	ENSCLAG00000001002	APEX1	88	72.043	Chinchilla_lanigera
ENSGAFG00000005311	apex1	99	67.089	ENSCSAG00000016685	-	99	67.089	Chlorocebus_sabaeus
ENSGAFG00000005311	apex1	99	67.089	ENSCSAG00000016670	-	99	67.089	Chlorocebus_sabaeus
ENSGAFG00000005311	apex1	99	69.620	ENSCPBG00000009567	APEX1	99	69.620	Chrysemys_picta_bellii
ENSGAFG00000005311	apex1	96	56.187	ENSCING00000008137	-	85	59.551	Ciona_intestinalis
ENSGAFG00000005311	apex1	86	52.612	ENSCSAVG00000007144	-	100	53.876	Ciona_savignyi
ENSGAFG00000005311	apex1	99	67.405	ENSCANG00000030726	APEX1	99	67.405	Colobus_angolensis_palliatus
ENSGAFG00000005311	apex1	99	65.397	ENSCGRG00001017046	Apex1	88	70.251	Cricetulus_griseus_chok1gshd
ENSGAFG00000005311	apex1	99	65.397	ENSCGRG00000008984	Apex1	88	70.251	Cricetulus_griseus_crigri
ENSGAFG00000005311	apex1	100	88.387	ENSCSEG00000017499	apex1	99	88.387	Cynoglossus_semilaevis
ENSGAFG00000005311	apex1	100	93.548	ENSCVAG00000022075	apex1	100	93.548	Cyprinodon_variegatus
ENSGAFG00000005311	apex1	99	85.437	ENSDARG00000045843	apex1	99	85.437	Danio_rerio
ENSGAFG00000005311	apex1	99	63.924	ENSDNOG00000042234	APEX1	83	68.817	Dasypus_novemcinctus
ENSGAFG00000005311	apex1	99	66.456	ENSDORG00000001616	Apex1	88	71.685	Dipodomys_ordii
ENSGAFG00000005311	apex1	99	67.089	ENSETEG00000004855	-	88	71.685	Echinops_telfairi
ENSGAFG00000005311	apex1	76	60.504	ENSEBUG00000000622	-	92	60.504	Eptatretus_burgeri
ENSGAFG00000005311	apex1	99	67.812	ENSEASG00005017489	APEX1	65	72.760	Equus_asinus_asinus
ENSGAFG00000005311	apex1	99	67.812	ENSECAG00000022325	APEX1	72	72.760	Equus_caballus
ENSGAFG00000005311	apex1	86	72.119	ENSEEUG00000012569	APEX1	93	72.119	Erinaceus_europaeus
ENSGAFG00000005311	apex1	99	82.258	ENSELUG00000021706	apex1	99	84.194	Esox_lucius
ENSGAFG00000005311	apex1	99	67.722	ENSFCAG00000030869	APEX1	88	72.760	Felis_catus
ENSGAFG00000005311	apex1	99	68.038	ENSFDAG00000006120	APEX1	88	73.118	Fukomys_damarensis
ENSGAFG00000005311	apex1	100	92.903	ENSFHEG00000009031	apex1	83	92.903	Fundulus_heteroclitus
ENSGAFG00000005311	apex1	100	76.774	ENSGMOG00000007943	apex1	99	76.774	Gadus_morhua
ENSGAFG00000005311	apex1	100	89.355	ENSGACG00000019497	apex1	99	92.105	Gasterosteus_aculeatus
ENSGAFG00000005311	apex1	99	69.620	ENSGAGG00000014999	APEX1	99	69.620	Gopherus_agassizii
ENSGAFG00000005311	apex1	99	66.772	ENSGGOG00000002128	APEX1	99	66.772	Gorilla_gorilla
ENSGAFG00000005311	apex1	100	91.613	ENSHBUG00000005894	apex1	100	91.613	Haplochromis_burtoni
ENSGAFG00000005311	apex1	99	67.722	ENSHGLG00000002848	APEX1	88	72.760	Heterocephalus_glaber_female
ENSGAFG00000005311	apex1	99	67.722	ENSHGLG00100017878	APEX1	88	72.760	Heterocephalus_glaber_male
ENSGAFG00000005311	apex1	100	87.460	ENSHCOG00000009961	apex1	100	87.138	Hippocampus_comes
ENSGAFG00000005311	apex1	99	84.839	ENSIPUG00000005799	apex1	99	84.839	Ictalurus_punctatus
ENSGAFG00000005311	apex1	99	67.405	ENSSTOG00000010096	APEX1	99	67.405	Ictidomys_tridecemlineatus
ENSGAFG00000005311	apex1	90	63.082	ENSJJAG00000020465	-	90	63.082	Jaculus_jaculus
ENSGAFG00000005311	apex1	99	66.772	ENSJJAG00000012067	-	88	71.326	Jaculus_jaculus
ENSGAFG00000005311	apex1	99	59.494	ENSJJAG00000003660	-	88	63.082	Jaculus_jaculus
ENSGAFG00000005311	apex1	100	92.258	ENSKMAG00000021171	apex1	100	92.258	Kryptolebias_marmoratus
ENSGAFG00000005311	apex1	100	88.387	ENSLBEG00000010248	apex1	100	88.387	Labrus_bergylta
ENSGAFG00000005311	apex1	99	73.885	ENSLACG00000008617	APEX1	89	78.571	Latimeria_chalumnae
ENSGAFG00000005311	apex1	99	77.316	ENSLOCG00000015516	apex1	99	76.358	Lepisosteus_oculatus
ENSGAFG00000005311	apex1	99	67.722	ENSLAFG00000021872	APEX1	88	72.760	Loxodonta_africana
ENSGAFG00000005311	apex1	99	66.772	ENSMFAG00000002565	APEX1	99	66.772	Macaca_fascicularis
ENSGAFG00000005311	apex1	99	66.772	ENSMMUG00000048039	APEX1	99	66.772	Macaca_mulatta
ENSGAFG00000005311	apex1	99	66.772	ENSMNEG00000036944	APEX1	99	66.772	Macaca_nemestrina
ENSGAFG00000005311	apex1	99	66.772	ENSMLEG00000042125	APEX1	99	66.772	Mandrillus_leucophaeus
ENSGAFG00000005311	apex1	100	92.581	ENSMAMG00000023526	apex1	100	92.581	Mastacembelus_armatus
ENSGAFG00000005311	apex1	100	91.613	ENSMZEG00005014187	apex1	100	91.613	Maylandia_zebra
ENSGAFG00000005311	apex1	99	65.714	ENSMAUG00000013994	Apex1	88	69.892	Mesocricetus_auratus
ENSGAFG00000005311	apex1	99	67.089	ENSMICG00000043554	APEX1	99	67.089	Microcebus_murinus
ENSGAFG00000005311	apex1	99	66.984	ENSMOCG00000013721	Apex1	99	66.984	Microtus_ochrogaster
ENSGAFG00000005311	apex1	100	86.174	ENSMMOG00000010031	apex1	97	86.174	Mola_mola
ENSGAFG00000005311	apex1	90	70.251	ENSMODG00000007125	APEX1	87	70.251	Monodelphis_domestica
ENSGAFG00000005311	apex1	90	83.571	ENSMALG00000011699	apex1	75	83.571	Monopterus_albus
ENSGAFG00000005311	apex1	99	68.153	MGP_CAROLIEiJ_G0019209	Apex1	99	68.153	Mus_caroli
ENSGAFG00000005311	apex1	99	67.937	ENSMUSG00000035960	Apex1	99	67.937	Mus_musculus
ENSGAFG00000005311	apex1	99	67.937	MGP_PahariEiJ_G0030232	Apex1	99	67.937	Mus_pahari
ENSGAFG00000005311	apex1	99	67.937	MGP_SPRETEiJ_G0020101	Apex1	99	67.937	Mus_spretus
ENSGAFG00000005311	apex1	96	68.896	ENSMLUG00000028957	APEX1	87	71.685	Myotis_lucifugus
ENSGAFG00000005311	apex1	99	66.772	ENSNGAG00000002725	-	87	72.464	Nannospalax_galili
ENSGAFG00000005311	apex1	87	54.152	ENSNGAG00000021748	-	72	58.333	Nannospalax_galili
ENSGAFG00000005311	apex1	100	91.613	ENSNBRG00000005334	apex1	91	91.613	Neolamprologus_brichardi
ENSGAFG00000005311	apex1	99	66.772	ENSNLEG00000010839	APEX1	99	66.772	Nomascus_leucogenys
ENSGAFG00000005311	apex1	93	68.276	ENSMEUG00000014519	APEX1	89	69.534	Notamacropus_eugenii
ENSGAFG00000005311	apex1	99	66.984	ENSOPRG00000014029	APEX1	88	70.968	Ochotona_princeps
ENSGAFG00000005311	apex1	93	53.979	ENSODEG00000004777	-	83	58.730	Octodon_degus
ENSGAFG00000005311	apex1	99	67.722	ENSODEG00000001703	-	88	72.760	Octodon_degus
ENSGAFG00000005311	apex1	99	51.863	ENSODEG00000006583	-	87	55.088	Octodon_degus
ENSGAFG00000005311	apex1	100	91.613	ENSONIG00000012089	apex1	100	91.613	Oreochromis_niloticus
ENSGAFG00000005311	apex1	88	70.182	ENSOANG00000008836	APEX1	68	70.182	Ornithorhynchus_anatinus
ENSGAFG00000005311	apex1	99	67.405	ENSOCUG00000005022	APEX1	99	67.405	Oryctolagus_cuniculus
ENSGAFG00000005311	apex1	100	91.640	ENSORLG00000012378	apex1	100	91.640	Oryzias_latipes
ENSGAFG00000005311	apex1	100	91.640	ENSORLG00020021371	apex1	100	91.640	Oryzias_latipes_hni
ENSGAFG00000005311	apex1	100	91.640	ENSORLG00015020089	apex1	100	91.640	Oryzias_latipes_hsok
ENSGAFG00000005311	apex1	100	90.997	ENSOMEG00000018876	apex1	100	90.997	Oryzias_melastigma
ENSGAFG00000005311	apex1	99	68.038	ENSOGAG00000013335	-	99	68.038	Otolemur_garnettii
ENSGAFG00000005311	apex1	98	61.513	ENSOGAG00000029355	-	89	64.516	Otolemur_garnettii
ENSGAFG00000005311	apex1	99	67.089	ENSOARG00000019740	-	88	71.685	Ovis_aries
ENSGAFG00000005311	apex1	96	64.052	ENSOARG00000001876	-	87	68.401	Ovis_aries
ENSGAFG00000005311	apex1	96	57.616	ENSOARG00000014424	-	89	59.857	Ovis_aries
ENSGAFG00000005311	apex1	99	67.089	ENSPPAG00000038760	APEX1	99	67.089	Pan_paniscus
ENSGAFG00000005311	apex1	99	67.722	ENSPPRG00000011794	APEX1	88	72.760	Panthera_pardus
ENSGAFG00000005311	apex1	99	67.722	ENSPTIG00000014829	APEX1	88	72.760	Panthera_tigris_altaica
ENSGAFG00000005311	apex1	99	67.089	ENSPTRG00000006093	APEX1	99	67.089	Pan_troglodytes
ENSGAFG00000005311	apex1	99	66.772	ENSPANG00000022757	APEX1	99	66.772	Papio_anubis
ENSGAFG00000005311	apex1	89	88.406	ENSPKIG00000003504	apex1	99	84.615	Paramormyrops_kingsleyae
ENSGAFG00000005311	apex1	86	77.323	ENSPMGG00000016596	apex1	79	77.323	Periophthalmus_magnuspinnatus
ENSGAFG00000005311	apex1	99	66.667	ENSPEMG00000019097	Apex1	99	66.667	Peromyscus_maniculatus_bairdii
ENSGAFG00000005311	apex1	93	71.134	ENSPMAG00000007275	-	95	72.401	Petromyzon_marinus
ENSGAFG00000005311	apex1	90	69.534	ENSPCIG00000023274	APEX1	87	69.534	Phascolarctos_cinereus
ENSGAFG00000005311	apex1	100	97.742	ENSPFOG00000004178	apex1	100	97.742	Poecilia_formosa
ENSGAFG00000005311	apex1	100	97.419	ENSPLAG00000012779	apex1	100	97.419	Poecilia_latipinna
ENSGAFG00000005311	apex1	100	97.742	ENSPMEG00000019623	apex1	100	97.742	Poecilia_mexicana
ENSGAFG00000005311	apex1	100	95.484	ENSPREG00000014298	apex1	99	95.484	Poecilia_reticulata
ENSGAFG00000005311	apex1	99	67.089	ENSPPYG00000005565	APEX1	99	67.089	Pongo_abelii
ENSGAFG00000005311	apex1	99	65.190	ENSPCAG00000010376	APEX1	99	65.190	Procavia_capensis
ENSGAFG00000005311	apex1	99	67.405	ENSPCOG00000021564	APEX1	99	67.405	Propithecus_coquereli
ENSGAFG00000005311	apex1	99	66.667	ENSPVAG00000010736	APEX1	87	72.043	Pteropus_vampyrus
ENSGAFG00000005311	apex1	100	91.935	ENSPNYG00000023940	apex1	100	91.935	Pundamilia_nyererei
ENSGAFG00000005311	apex1	92	86.014	ENSPNAG00000020897	apex1	96	85.965	Pygocentrus_nattereri
ENSGAFG00000005311	apex1	99	67.302	ENSRNOG00000009663	Apex1	99	67.302	Rattus_norvegicus
ENSGAFG00000005311	apex1	99	67.089	ENSRBIG00000038325	APEX1	98	67.089	Rhinopithecus_bieti
ENSGAFG00000005311	apex1	99	67.405	ENSSBOG00000018921	-	88	72.401	Saimiri_boliviensis_boliviensis
ENSGAFG00000005311	apex1	99	60.000	ENSSBOG00000031372	-	91	63.082	Saimiri_boliviensis_boliviensis
ENSGAFG00000005311	apex1	100	63.376	ENSSHAG00000013524	APEX1	87	68.794	Sarcophilus_harrisii
ENSGAFG00000005311	apex1	99	80.645	ENSSFOG00015001948	apex1	99	82.848	Scleropages_formosus
ENSGAFG00000005311	apex1	100	86.349	ENSSMAG00000013348	apex1	100	86.667	Scophthalmus_maximus
ENSGAFG00000005311	apex1	100	90.968	ENSSDUG00000016377	apex1	99	90.968	Seriola_dumerili
ENSGAFG00000005311	apex1	100	90.645	ENSSLDG00000023005	apex1	100	90.645	Seriola_lalandi_dorsalis
ENSGAFG00000005311	apex1	90	73.214	ENSSPUG00000000531	APEX1	99	68.506	Sphenodon_punctatus
ENSGAFG00000005311	apex1	100	89.355	ENSSPAG00000000458	apex1	100	89.355	Stegastes_partitus
ENSGAFG00000005311	apex1	99	67.722	ENSSSCG00000040060	-	99	67.722	Sus_scrofa
ENSGAFG00000005311	apex1	95	40.594	ENSSSCG00000039705	-	89	42.960	Sus_scrofa
ENSGAFG00000005311	apex1	76	58.298	ENSTGUG00000014378	APEX1	100	58.298	Taeniopygia_guttata
ENSGAFG00000005311	apex1	100	83.387	ENSTRUG00000004268	apex1	95	84.345	Takifugu_rubripes
ENSGAFG00000005311	apex1	100	83.871	ENSTNIG00000005778	apex1	100	83.871	Tetraodon_nigroviridis
ENSGAFG00000005311	apex1	99	64.241	ENSTBEG00000006405	APEX1	88	68.817	Tupaia_belangeri
ENSGAFG00000005311	apex1	76	71.064	ENSTTRG00000007860	APEX1	100	71.064	Tursiops_truncatus
ENSGAFG00000005311	apex1	99	67.089	ENSUAMG00000010457	APEX1	88	72.043	Ursus_americanus
ENSGAFG00000005311	apex1	99	67.089	ENSUMAG00000009178	APEX1	88	72.043	Ursus_maritimus
ENSGAFG00000005311	apex1	76	66.383	ENSVPAG00000005083	APEX1	100	66.383	Vicugna_pacos
ENSGAFG00000005311	apex1	99	67.089	ENSVVUG00000009010	APEX1	99	67.089	Vulpes_vulpes
ENSGAFG00000005311	apex1	99	68.471	ENSXETG00000024773	apex1	99	68.471	Xenopus_tropicalis
ENSGAFG00000005311	apex1	100	98.065	ENSXCOG00000015233	apex1	99	98.065	Xiphophorus_couchianus
ENSGAFG00000005311	apex1	100	98.065	ENSXMAG00000006195	apex1	100	98.065	Xiphophorus_maculatus