EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005423 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8965 bases
Position: chrNHOQ01001678.1:3415242-3424206
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007975	ARS2	PF04959.13	4.6e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008056	-	2869	-	ENSGAFP00000007975	877 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005423	srrt	52	63.696	ENSGAFG00000020383	-	54	64.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005423	srrt	51	75.764	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSGAFG00000005423	srrt	95	89.536	ENSAPOG00000002304	srrt	95	88.942	Acanthochromis_polyacanthus
ENSGAFG00000005423	srrt	96	64.327	ENSAMEG00000014506	SRRT	51	76.044	Ailuropoda_melanoleuca
ENSGAFG00000005423	srrt	85	91.176	ENSACIG00000015795	srrt	90	91.685	Amphilophus_citrinellus
ENSGAFG00000005423	srrt	93	56.316	ENSAOCG00000009189	-	52	67.538	Amphiprion_ocellaris
ENSGAFG00000005423	srrt	95	89.392	ENSAOCG00000009693	srrt	95	88.796	Amphiprion_ocellaris
ENSGAFG00000005423	srrt	95	89.035	ENSAPEG00000003646	srrt	95	88.439	Amphiprion_percula
ENSGAFG00000005423	srrt	93	56.316	ENSAPEG00000020016	-	52	67.538	Amphiprion_percula
ENSGAFG00000005423	srrt	95	86.499	ENSATEG00000014425	srrt	95	86.499	Anabas_testudineus
ENSGAFG00000005423	srrt	53	64.854	ENSATEG00000003652	-	85	67.026	Anabas_testudineus
ENSGAFG00000005423	srrt	95	64.852	ENSACAG00000001014	SRRT	95	64.923	Anolis_carolinensis
ENSGAFG00000005423	srrt	51	74.624	ENSANAG00000031718	SRRT	53	74.624	Aotus_nancymaae
ENSGAFG00000005423	srrt	95	86.754	ENSACLG00000013156	srrt	92	87.470	Astatotilapia_calliptera
ENSGAFG00000005423	srrt	53	65.474	ENSACLG00000009423	-	52	66.304	Astatotilapia_calliptera
ENSGAFG00000005423	srrt	51	74.194	ENSBTAG00000001134	SRRT	53	74.194	Bos_taurus
ENSGAFG00000005423	srrt	61	45.833	WBGene00017085	E01A2.2	85	42.616	Caenorhabditis_elegans
ENSGAFG00000005423	srrt	51	73.978	ENSCJAG00000014917	SRRT	53	74.409	Callithrix_jacchus
ENSGAFG00000005423	srrt	96	63.426	ENSCAFG00000023538	SRRT	53	74.409	Canis_familiaris
ENSGAFG00000005423	srrt	98	63.098	ENSCAFG00020013358	SRRT	52	76.275	Canis_lupus_dingo
ENSGAFG00000005423	srrt	88	74.242	ENSCHIG00000010495	SRRT	87	74.242	Capra_hircus
ENSGAFG00000005423	srrt	51	74.675	ENSTSYG00000036426	SRRT	56	74.675	Carlito_syrichta
ENSGAFG00000005423	srrt	51	75.604	ENSCAPG00000013586	SRRT	89	70.464	Cavia_aperea
ENSGAFG00000005423	srrt	51	73.820	ENSCPOG00000001739	SRRT	53	73.820	Cavia_porcellus
ENSGAFG00000005423	srrt	51	74.624	ENSCCAG00000015877	SRRT	53	74.624	Cebus_capucinus
ENSGAFG00000005423	srrt	51	74.675	ENSCATG00000036306	SRRT	53	74.675	Cercocebus_atys
ENSGAFG00000005423	srrt	96	62.037	ENSCLAG00000007568	SRRT	89	70.878	Chinchilla_lanigera
ENSGAFG00000005423	srrt	51	74.624	ENSCSAG00000017996	SRRT	53	74.624	Chlorocebus_sabaeus
ENSGAFG00000005423	srrt	51	74.074	ENSCHOG00000007815	SRRT	62	73.529	Choloepus_hoffmanni
ENSGAFG00000005423	srrt	73	67.925	ENSCPBG00000011553	SRRT	84	63.228	Chrysemys_picta_bellii
ENSGAFG00000005423	srrt	100	40.885	ENSCING00000003506	-	54	51.245	Ciona_intestinalis
ENSGAFG00000005423	srrt	100	42.746	ENSCSAVG00000008394	-	81	57.020	Ciona_savignyi
ENSGAFG00000005423	srrt	51	74.892	ENSCANG00000034556	SRRT	53	74.892	Colobus_angolensis_palliatus
ENSGAFG00000005423	srrt	96	64.005	ENSCGRG00001001594	Srrt	53	74.839	Cricetulus_griseus_chok1gshd
ENSGAFG00000005423	srrt	91	80.392	ENSCGRG00000007292	Srrt	87	74.304	Cricetulus_griseus_crigri
ENSGAFG00000005423	srrt	74	64.744	ENSCSEG00000005233	-	78	65.359	Cynoglossus_semilaevis
ENSGAFG00000005423	srrt	98	74.799	ENSCSEG00000017878	srrt	95	73.790	Cynoglossus_semilaevis
ENSGAFG00000005423	srrt	95	92.124	ENSCVAG00000019848	srrt	92	95.395	Cyprinodon_variegatus
ENSGAFG00000005423	srrt	90	53.731	ENSCVAG00000017344	-	52	65.668	Cyprinodon_variegatus
ENSGAFG00000005423	srrt	96	77.076	ENSDARG00000017762	srrt	95	77.374	Danio_rerio
ENSGAFG00000005423	srrt	51	74.624	ENSDNOG00000003851	SRRT	53	74.624	Dasypus_novemcinctus
ENSGAFG00000005423	srrt	51	75.054	ENSDORG00000005584	Srrt	89	71.922	Dipodomys_ordii
ENSGAFG00000005423	srrt	100	46.713	FBgn0033062	Ars2	77	53.092	Drosophila_melanogaster
ENSGAFG00000005423	srrt	74	71.882	ENSETEG00000016175	SRRT	71	71.882	Echinops_telfairi
ENSGAFG00000005423	srrt	60	62.826	ENSEBUG00000008517	-	76	62.826	Eptatretus_burgeri
ENSGAFG00000005423	srrt	96	64.005	ENSEASG00005016956	SRRT	53	74.624	Equus_asinus_asinus
ENSGAFG00000005423	srrt	96	64.005	ENSECAG00000012292	SRRT	53	74.624	Equus_caballus
ENSGAFG00000005423	srrt	81	76.042	ENSEEUG00000009117	SRRT	57	82.432	Erinaceus_europaeus
ENSGAFG00000005423	srrt	93	58.560	ENSELUG00000021216	-	53	68.376	Esox_lucius
ENSGAFG00000005423	srrt	96	63.134	ENSFCAG00000006855	SRRT	53	74.624	Felis_catus
ENSGAFG00000005423	srrt	51	71.681	ENSFDAG00000021347	SRRT	88	69.027	Fukomys_damarensis
ENSGAFG00000005423	srrt	53	57.143	ENSFHEG00000004105	-	93	57.113	Fundulus_heteroclitus
ENSGAFG00000005423	srrt	76	94.841	ENSFHEG00000002756	srrt	90	94.841	Fundulus_heteroclitus
ENSGAFG00000005423	srrt	70	64.336	ENSGMOG00000018694	-	84	60.521	Gadus_morhua
ENSGAFG00000005423	srrt	96	74.733	ENSGMOG00000018619	srrt	51	79.560	Gadus_morhua
ENSGAFG00000005423	srrt	96	84.416	ENSGACG00000020387	srrt	95	84.005	Gasterosteus_aculeatus
ENSGAFG00000005423	srrt	93	55.370	ENSGACG00000001100	-	52	63.974	Gasterosteus_aculeatus
ENSGAFG00000005423	srrt	51	74.892	ENSGGOG00000001508	SRRT	63	65.969	Gorilla_gorilla
ENSGAFG00000005423	srrt	95	86.874	ENSHBUG00000002942	srrt	92	87.589	Haplochromis_burtoni
ENSGAFG00000005423	srrt	96	63.510	ENSHGLG00000008344	Srrt	89	70.664	Heterocephalus_glaber_female
ENSGAFG00000005423	srrt	96	63.879	ENSHGLG00100018857	Srrt	89	71.429	Heterocephalus_glaber_male
ENSGAFG00000005423	srrt	93	54.523	ENSHCOG00000008904	-	89	64.018	Hippocampus_comes
ENSGAFG00000005423	srrt	98	81.702	ENSHCOG00000005403	srrt	95	80.861	Hippocampus_comes
ENSGAFG00000005423	srrt	93	73.729	ENSIPUG00000021150	srrt	95	73.498	Ictalurus_punctatus
ENSGAFG00000005423	srrt	96	62.586	ENSSTOG00000013776	SRRT	53	74.892	Ictidomys_tridecemlineatus
ENSGAFG00000005423	srrt	96	64.169	ENSJJAG00000010446	Srrt	89	71.861	Jaculus_jaculus
ENSGAFG00000005423	srrt	53	63.786	ENSKMAG00000008468	-	53	65.116	Kryptolebias_marmoratus
ENSGAFG00000005423	srrt	95	85.867	ENSKMAG00000013599	srrt	95	85.986	Kryptolebias_marmoratus
ENSGAFG00000005423	srrt	98	80.462	ENSLBEG00000016308	srrt	54	89.417	Labrus_bergylta
ENSGAFG00000005423	srrt	95	55.229	ENSLACG00000001089	SRRT	53	57.918	Latimeria_chalumnae
ENSGAFG00000005423	srrt	91	57.473	ENSLOCG00000013658	srrt	76	83.228	Lepisosteus_oculatus
ENSGAFG00000005423	srrt	51	74.839	ENSLAFG00000007725	SRRT	53	74.839	Loxodonta_africana
ENSGAFG00000005423	srrt	51	74.892	ENSMFAG00000033745	SRRT	56	73.150	Macaca_fascicularis
ENSGAFG00000005423	srrt	96	63.158	ENSMMUG00000021255	SRRT	53	74.624	Macaca_mulatta
ENSGAFG00000005423	srrt	51	74.624	ENSMNEG00000041864	SRRT	53	74.624	Macaca_nemestrina
ENSGAFG00000005423	srrt	51	74.892	ENSMLEG00000029479	SRRT	55	73.150	Mandrillus_leucophaeus
ENSGAFG00000005423	srrt	95	86.977	ENSMAMG00000014311	srrt	95	86.499	Mastacembelus_armatus
ENSGAFG00000005423	srrt	93	57.473	ENSMAMG00000010681	-	52	68.330	Mastacembelus_armatus
ENSGAFG00000005423	srrt	53	65.684	ENSMZEG00005028002	-	52	66.522	Maylandia_zebra
ENSGAFG00000005423	srrt	95	86.874	ENSMZEG00005016135	srrt	92	87.589	Maylandia_zebra
ENSGAFG00000005423	srrt	51	74.194	ENSMAUG00000011386	Srrt	89	70.851	Mesocricetus_auratus
ENSGAFG00000005423	srrt	51	74.624	ENSMICG00000009471	SRRT	55	73.150	Microcebus_murinus
ENSGAFG00000005423	srrt	51	74.624	ENSMOCG00000001971	Srrt	89	70.464	Microtus_ochrogaster
ENSGAFG00000005423	srrt	83	56.258	ENSMMOG00000011137	-	55	67.245	Mola_mola
ENSGAFG00000005423	srrt	51	71.368	ENSMODG00000004862	SRRT	89	71.581	Monodelphis_domestica
ENSGAFG00000005423	srrt	90	80.625	ENSMALG00000018604	srrt	99	77.938	Monopterus_albus
ENSGAFG00000005423	srrt	55	51.860	ENSMALG00000005567	-	84	54.525	Monopterus_albus
ENSGAFG00000005423	srrt	96	64.871	MGP_CAROLIEiJ_G0027870	Srrt	99	72.015	Mus_caroli
ENSGAFG00000005423	srrt	96	64.871	ENSMUSG00000037364	Srrt	99	72.015	Mus_musculus
ENSGAFG00000005423	srrt	51	76.044	MGP_PahariEiJ_G0024456	Srrt	99	72.015	Mus_pahari
ENSGAFG00000005423	srrt	96	64.871	MGP_SPRETEiJ_G0028875	Srrt	99	72.015	Mus_spretus
ENSGAFG00000005423	srrt	96	64.236	ENSMPUG00000015839	SRRT	53	74.624	Mustela_putorius_furo
ENSGAFG00000005423	srrt	51	74.409	ENSMLUG00000009975	SRRT	53	74.409	Myotis_lucifugus
ENSGAFG00000005423	srrt	96	64.953	ENSNGAG00000023715	Srrt	64	74.624	Nannospalax_galili
ENSGAFG00000005423	srrt	98	85.698	ENSNBRG00000019100	srrt	95	86.022	Neolamprologus_brichardi
ENSGAFG00000005423	srrt	51	64.978	ENSNLEG00000011987	SRRT	54	64.488	Nomascus_leucogenys
ENSGAFG00000005423	srrt	96	54.556	ENSMEUG00000011941	SRRT	52	61.422	Notamacropus_eugenii
ENSGAFG00000005423	srrt	61	72.727	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSGAFG00000005423	srrt	51	75.824	ENSODEG00000016856	SRRT	89	71.645	Octodon_degus
ENSGAFG00000005423	srrt	95	85.459	ENSONIG00000004242	srrt	95	82.811	Oreochromis_niloticus
ENSGAFG00000005423	srrt	93	57.838	ENSONIG00000016080	-	94	57.807	Oreochromis_niloticus
ENSGAFG00000005423	srrt	98	84.965	ENSORLG00000008120	srrt	95	84.229	Oryzias_latipes
ENSGAFG00000005423	srrt	98	84.732	ENSORLG00020003058	srrt	95	83.990	Oryzias_latipes_hni
ENSGAFG00000005423	srrt	98	84.615	ENSORLG00015008062	srrt	95	83.871	Oryzias_latipes_hsok
ENSGAFG00000005423	srrt	93	58.617	ENSOMEG00000006963	-	53	67.396	Oryzias_melastigma
ENSGAFG00000005423	srrt	98	85.664	ENSOMEG00000003155	srrt	90	90.132	Oryzias_melastigma
ENSGAFG00000005423	srrt	51	74.624	ENSOGAG00000017242	SRRT	53	74.624	Otolemur_garnettii
ENSGAFG00000005423	srrt	51	74.459	ENSOARG00000015645	SRRT	53	74.459	Ovis_aries
ENSGAFG00000005423	srrt	51	74.892	ENSPPAG00000041090	SRRT	53	74.892	Pan_paniscus
ENSGAFG00000005423	srrt	96	63.121	ENSPPRG00000009557	SRRT	53	74.675	Panthera_pardus
ENSGAFG00000005423	srrt	96	63.773	ENSPTIG00000014355	SRRT	53	74.624	Panthera_tigris_altaica
ENSGAFG00000005423	srrt	51	74.892	ENSPTRG00000019511	SRRT	53	74.892	Pan_troglodytes
ENSGAFG00000005423	srrt	51	73.150	ENSPANG00000020763	SRRT	54	73.150	Papio_anubis
ENSGAFG00000005423	srrt	94	70.913	ENSPKIG00000022212	-	52	80.617	Paramormyrops_kingsleyae
ENSGAFG00000005423	srrt	98	73.295	ENSPKIG00000005434	srrt	95	73.185	Paramormyrops_kingsleyae
ENSGAFG00000005423	srrt	51	76.159	ENSPSIG00000016311	SRRT	52	76.159	Pelodiscus_sinensis
ENSGAFG00000005423	srrt	98	77.739	ENSPMGG00000002841	srrt	56	86.853	Periophthalmus_magnuspinnatus
ENSGAFG00000005423	srrt	51	76.044	ENSPEMG00000010834	Srrt	89	71.645	Peromyscus_maniculatus_bairdii
ENSGAFG00000005423	srrt	96	53.970	ENSPMAG00000009614	-	55	63.291	Petromyzon_marinus
ENSGAFG00000005423	srrt	96	63.731	ENSPCIG00000000816	SRRT	53	72.591	Phascolarctos_cinereus
ENSGAFG00000005423	srrt	100	97.950	ENSPFOG00000005704	srrt	100	97.950	Poecilia_formosa
ENSGAFG00000005423	srrt	100	95.941	ENSPLAG00000021992	srrt	100	95.941	Poecilia_latipinna
ENSGAFG00000005423	srrt	100	97.494	ENSPMEG00000001182	srrt	100	97.494	Poecilia_mexicana
ENSGAFG00000005423	srrt	100	97.608	ENSPREG00000022308	srrt	100	97.608	Poecilia_reticulata
ENSGAFG00000005423	srrt	51	72.727	ENSPCAG00000001621	SRRT	53	72.727	Procavia_capensis
ENSGAFG00000005423	srrt	51	74.892	ENSPCOG00000025751	SRRT	53	74.892	Propithecus_coquereli
ENSGAFG00000005423	srrt	60	66.667	ENSPVAG00000000834	SRRT	90	66.452	Pteropus_vampyrus
ENSGAFG00000005423	srrt	95	86.754	ENSPNYG00000018710	srrt	95	87.470	Pundamilia_nyererei
ENSGAFG00000005423	srrt	85	63.257	ENSPNAG00000010629	srrt	94	61.047	Pygocentrus_nattereri
ENSGAFG00000005423	srrt	51	65.284	ENSRNOG00000048277	AABR07035787.1	92	65.284	Rattus_norvegicus
ENSGAFG00000005423	srrt	51	74.624	ENSRBIG00000035718	SRRT	67	67.204	Rhinopithecus_bieti
ENSGAFG00000005423	srrt	51	74.624	ENSRROG00000030622	SRRT	67	67.204	Rhinopithecus_roxellana
ENSGAFG00000005423	srrt	51	74.892	ENSSBOG00000033570	SRRT	53	74.892	Saimiri_boliviensis_boliviensis
ENSGAFG00000005423	srrt	72	60.583	ENSSHAG00000007349	-	74	72.068	Sarcophilus_harrisii
ENSGAFG00000005423	srrt	94	75.833	ENSSFOG00015017293	srrt	95	76.678	Scleropages_formosus
ENSGAFG00000005423	srrt	51	64.795	ENSSMAG00000018195	-	57	64.795	Scophthalmus_maximus
ENSGAFG00000005423	srrt	95	87.216	ENSSMAG00000015342	srrt	95	87.216	Scophthalmus_maximus
ENSGAFG00000005423	srrt	53	55.417	ENSSDUG00000002051	-	93	56.867	Seriola_dumerili
ENSGAFG00000005423	srrt	95	89.606	ENSSDUG00000012049	srrt	91	89.606	Seriola_dumerili
ENSGAFG00000005423	srrt	83	90.989	ENSSLDG00000017477	srrt	87	90.989	Seriola_lalandi_dorsalis
ENSGAFG00000005423	srrt	95	88.599	ENSSPAG00000005665	srrt	94	88.005	Stegastes_partitus
ENSGAFG00000005423	srrt	51	58.478	ENSSPAG00000018943	-	93	58.261	Stegastes_partitus
ENSGAFG00000005423	srrt	98	81.503	ENSTRUG00000016075	srrt	95	81.517	Takifugu_rubripes
ENSGAFG00000005423	srrt	90	53.540	ENSTRUG00000000023	-	51	62.156	Takifugu_rubripes
ENSGAFG00000005423	srrt	74	75.862	ENSTNIG00000011779	srrt	73	85.288	Tetraodon_nigroviridis
ENSGAFG00000005423	srrt	93	54.116	ENSTNIG00000003111	-	53	63.816	Tetraodon_nigroviridis
ENSGAFG00000005423	srrt	58	77.119	ENSTBEG00000005212	SRRT	57	77.119	Tupaia_belangeri
ENSGAFG00000005423	srrt	51	74.409	ENSTTRG00000011104	SRRT	53	74.409	Tursiops_truncatus
ENSGAFG00000005423	srrt	96	63.531	ENSUAMG00000027997	SRRT	55	74.624	Ursus_americanus
ENSGAFG00000005423	srrt	96	63.657	ENSUMAG00000011295	SRRT	53	74.624	Ursus_maritimus
ENSGAFG00000005423	srrt	96	63.426	ENSVVUG00000023572	SRRT	53	74.409	Vulpes_vulpes
ENSGAFG00000005423	srrt	72	76.404	ENSXETG00000025124	srrt	72	75.796	Xenopus_tropicalis
ENSGAFG00000005423	srrt	53	52.643	ENSXCOG00000013105	-	91	53.664	Xiphophorus_couchianus
ENSGAFG00000005423	srrt	100	97.719	ENSXMAG00000007627	srrt	100	97.719	Xiphophorus_maculatus
ENSGAFG00000005423	srrt	93	54.513	ENSXMAG00000002090	-	54	65.652	Xiphophorus_maculatus