EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005457 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3515 bases
Position: chrNHOQ01002125.1:419966-423480
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008008	RRM_1	PF00076.22	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008089	RNPS1-201	1569	-	ENSGAFP00000008008	280 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005457	RNPS1	77	80.000	ENSAPOG00000017310	RNPS1	69	77.103	Acanthochromis_polyacanthus
ENSGAFG00000005457	RNPS1	76	69.626	ENSACIG00000014367	-	77	70.833	Amphilophus_citrinellus
ENSGAFG00000005457	RNPS1	77	74.537	ENSAOCG00000002404	RNPS1	77	76.389	Amphiprion_ocellaris
ENSGAFG00000005457	RNPS1	76	74.419	ENSAPEG00000006497	RNPS1	74	76.279	Amphiprion_percula
ENSGAFG00000005457	RNPS1	77	78.241	ENSATEG00000024267	RNPS1	77	81.019	Anabas_testudineus
ENSGAFG00000005457	RNPS1	75	64.319	ENSACLG00000021537	-	81	68.056	Astatotilapia_calliptera
ENSGAFG00000005457	RNPS1	77	80.000	ENSACLG00000025942	RNPS1	77	77.209	Astatotilapia_calliptera
ENSGAFG00000005457	RNPS1	77	76.147	ENSAMXG00000006330	-	81	66.337	Astyanax_mexicanus
ENSGAFG00000005457	RNPS1	75	67.742	ENSCSAG00000005219	-	72	65.899	Chlorocebus_sabaeus
ENSGAFG00000005457	RNPS1	75	48.826	ENSCPBG00000000214	RNPS1	74	51.852	Chrysemys_picta_bellii
ENSGAFG00000005457	RNPS1	76	76.389	ENSCSEG00000000402	RNPS1	71	67.593	Cynoglossus_semilaevis
ENSGAFG00000005457	RNPS1	76	73.488	ENSCSEG00000015997	RNPS1	75	74.419	Cynoglossus_semilaevis
ENSGAFG00000005457	RNPS1	100	97.143	ENSCVAG00000010868	RNPS1	100	97.143	Cyprinodon_variegatus
ENSGAFG00000005457	RNPS1	77	69.863	ENSDARG00000116743	rnps1	77	72.603	Danio_rerio
ENSGAFG00000005457	RNPS1	77	69.863	ENSDARG00000100188	RNPS1	77	72.603	Danio_rerio
ENSGAFG00000005457	RNPS1	75	63.426	ENSFCAG00000007690	RNPS1	80	65.534	Felis_catus
ENSGAFG00000005457	RNPS1	100	96.085	ENSFHEG00000011705	RNPS1	100	96.085	Fundulus_heteroclitus
ENSGAFG00000005457	RNPS1	77	79.724	ENSGACG00000011261	RNPS1	77	88.018	Gasterosteus_aculeatus
ENSGAFG00000005457	RNPS1	77	64.055	ENSGACG00000005641	-	77	64.977	Gasterosteus_aculeatus
ENSGAFG00000005457	RNPS1	77	79.535	ENSHBUG00000002494	RNPS1	77	76.744	Haplochromis_burtoni
ENSGAFG00000005457	RNPS1	75	64.319	ENSHBUG00000017337	-	77	68.056	Haplochromis_burtoni
ENSGAFG00000005457	RNPS1	75	56.808	ENSHGLG00000013666	-	72	59.624	Heterocephalus_glaber_female
ENSGAFG00000005457	RNPS1	75	56.808	ENSHGLG00100011327	-	72	59.624	Heterocephalus_glaber_male
ENSGAFG00000005457	RNPS1	75	64.815	ENSHGLG00100001721	-	69	60.465	Heterocephalus_glaber_male
ENSGAFG00000005457	RNPS1	75	79.724	ENSHCOG00000004424	RNPS1	78	80.995	Hippocampus_comes
ENSGAFG00000005457	RNPS1	77	68.326	ENSIPUG00000011746	rnps1	85	69.683	Ictalurus_punctatus
ENSGAFG00000005457	RNPS1	75	62.963	ENSJJAG00000015576	-	77	66.820	Jaculus_jaculus
ENSGAFG00000005457	RNPS1	76	92.488	ENSKMAG00000009135	RNPS1	77	92.558	Kryptolebias_marmoratus
ENSGAFG00000005457	RNPS1	75	73.810	ENSLBEG00000024091	RNPS1	77	74.299	Labrus_bergylta
ENSGAFG00000005457	RNPS1	77	65.138	ENSLOCG00000001758	RNPS1	77	65.138	Lepisosteus_oculatus
ENSGAFG00000005457	RNPS1	79	64.474	ENSMFAG00000044121	-	74	60.829	Macaca_fascicularis
ENSGAFG00000005457	RNPS1	72	63.462	ENSMLEG00000040232	-	83	63.084	Mandrillus_leucophaeus
ENSGAFG00000005457	RNPS1	76	80.374	ENSMAMG00000021609	-	77	83.333	Mastacembelus_armatus
ENSGAFG00000005457	RNPS1	75	77.465	ENSMAMG00000021148	-	76	72.222	Mastacembelus_armatus
ENSGAFG00000005457	RNPS1	77	64.055	ENSMZEG00005006256	-	78	68.203	Maylandia_zebra
ENSGAFG00000005457	RNPS1	77	80.000	ENSMZEG00005012742	RNPS1	77	77.209	Maylandia_zebra
ENSGAFG00000005457	RNPS1	75	62.500	ENSMICG00000031543	RNPS1	77	66.359	Microcebus_murinus
ENSGAFG00000005457	RNPS1	96	56.159	ENSMOCG00000000276	-	67	53.521	Microtus_ochrogaster
ENSGAFG00000005457	RNPS1	76	73.585	ENSMMOG00000010863	RNPS1	77	74.299	Mola_mola
ENSGAFG00000005457	RNPS1	76	76.056	ENSMALG00000016619	RNPS1	68	79.535	Monopterus_albus
ENSGAFG00000005457	RNPS1	76	73.832	ENSNBRG00000023437	RNPS1	77	74.299	Neolamprologus_brichardi
ENSGAFG00000005457	RNPS1	76	64.486	ENSNBRG00000014540	-	79	68.203	Neolamprologus_brichardi
ENSGAFG00000005457	RNPS1	88	63.745	ENSNLEG00000009243	RNPS1	87	66.359	Nomascus_leucogenys
ENSGAFG00000005457	RNPS1	77	64.055	ENSONIG00000019627	-	78	68.203	Oreochromis_niloticus
ENSGAFG00000005457	RNPS1	77	74.884	ENSORLG00000008033	RNPS1	94	69.756	Oryzias_latipes
ENSGAFG00000005457	RNPS1	76	71.495	ENSORLG00020020207	RNPS1	75	69.811	Oryzias_latipes_hni
ENSGAFG00000005457	RNPS1	76	75.234	ENSORLG00015000305	-	75	70.283	Oryzias_latipes_hsok
ENSGAFG00000005457	RNPS1	75	61.792	ENSORLG00015011183	RNPS1	67	67.136	Oryzias_latipes_hsok
ENSGAFG00000005457	RNPS1	87	58.871	ENSPPAG00000011845	RNPS1	80	61.574	Pan_paniscus
ENSGAFG00000005457	RNPS1	75	63.426	ENSPPRG00000011255	RNPS1	80	65.534	Panthera_pardus
ENSGAFG00000005457	RNPS1	50	61.151	ENSPTIG00000015643	RNPS1	52	79.000	Panthera_tigris_altaica
ENSGAFG00000005457	RNPS1	77	71.364	ENSPKIG00000023465	RNPS1	77	67.727	Paramormyrops_kingsleyae
ENSGAFG00000005457	RNPS1	100	99.286	ENSPFOG00000009978	RNPS1	100	99.286	Poecilia_formosa
ENSGAFG00000005457	RNPS1	100	99.286	ENSPLAG00000009343	RNPS1	100	99.286	Poecilia_latipinna
ENSGAFG00000005457	RNPS1	100	99.286	ENSPMEG00000008552	RNPS1	100	99.286	Poecilia_mexicana
ENSGAFG00000005457	RNPS1	100	99.286	ENSPREG00000001843	RNPS1	100	99.286	Poecilia_reticulata
ENSGAFG00000005457	RNPS1	75	62.500	ENSPCOG00000005478	RNPS1	82	65.196	Propithecus_coquereli
ENSGAFG00000005457	RNPS1	77	80.000	ENSPNYG00000000585	RNPS1	77	77.209	Pundamilia_nyererei
ENSGAFG00000005457	RNPS1	77	76.147	ENSPNAG00000025479	RNPS1	77	68.807	Pygocentrus_nattereri
ENSGAFG00000005457	RNPS1	78	78.378	ENSSFOG00015022746	RNPS1	80	72.727	Scleropages_formosus
ENSGAFG00000005457	RNPS1	75	77.465	ENSSFOG00015019341	-	73	76.355	Scleropages_formosus
ENSGAFG00000005457	RNPS1	77	82.326	ENSSMAG00000016933	RNPS1	77	80.000	Scophthalmus_maximus
ENSGAFG00000005457	RNPS1	77	80.093	ENSSDUG00000011453	RNPS1	77	82.870	Seriola_dumerili
ENSGAFG00000005457	RNPS1	74	82.692	ENSSLDG00000021341	RNPS1	76	79.808	Seriola_lalandi_dorsalis
ENSGAFG00000005457	RNPS1	77	77.315	ENSSPAG00000009383	RNPS1	77	80.093	Stegastes_partitus
ENSGAFG00000005457	RNPS1	75	61.860	ENSTGUG00000003237	RNPS1	77	65.297	Taeniopygia_guttata
ENSGAFG00000005457	RNPS1	76	74.074	ENSTRUG00000008602	RNPS1	77	76.606	Takifugu_rubripes
ENSGAFG00000005457	RNPS1	76	74.884	ENSTNIG00000009753	RNPS1	76	77.419	Tetraodon_nigroviridis
ENSGAFG00000005457	RNPS1	84	68.443	ENSXETG00000024439	rnps1	78	66.116	Xenopus_tropicalis
ENSGAFG00000005457	RNPS1	100	99.286	ENSXMAG00000004827	RNPS1	100	99.286	Xiphophorus_maculatus