EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005517 (Gene tree)
Gene ID: -
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3454 bases
Position: chrNHOQ01000739.1:3425950-3429403
Accession: 17948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008103	CSD	PF00313.22	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008184	YBX2-201	2206	-	ENSGAFP00000008103	325 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005517	YBX2	93	66.343	ENSAPOG00000012329	YBX2	96	67.702	Acanthochromis_polyacanthus
ENSGAFG00000005517	YBX2	93	64.918	ENSAOCG00000003847	YBX2	96	68.868	Amphiprion_ocellaris
ENSGAFG00000005517	YBX2	93	65.246	ENSAPEG00000014010	YBX2	96	69.497	Amphiprion_percula
ENSGAFG00000005517	YBX2	100	60.920	ENSACLG00000004460	YBX2	100	64.368	Astatotilapia_calliptera
ENSGAFG00000005517	YBX2	97	56.075	ENSAMXG00000007090	YBX2	93	60.131	Astyanax_mexicanus
ENSGAFG00000005517	YBX2	96	62.696	ENSCSEG00000002588	YBX2	91	66.225	Cynoglossus_semilaevis
ENSGAFG00000005517	YBX2	99	72.121	ENSCVAG00000004075	YBX2	97	76.453	Cyprinodon_variegatus
ENSGAFG00000005517	YBX2	97	61.290	ENSELUG00000014487	YBX2	99	59.824	Esox_lucius
ENSGAFG00000005517	YBX2	100	73.193	ENSFHEG00000001823	YBX2	99	74.699	Fundulus_heteroclitus
ENSGAFG00000005517	YBX2	93	62.951	ENSGACG00000019392	-	100	64.458	Gasterosteus_aculeatus
ENSGAFG00000005517	YBX2	100	60.632	ENSHBUG00000002391	YBX2	100	64.368	Haplochromis_burtoni
ENSGAFG00000005517	YBX2	95	59.416	ENSHCOG00000004582	-	96	60.390	Hippocampus_comes
ENSGAFG00000005517	YBX2	97	52.050	ENSIPUG00000019571	YBX2	99	53.918	Ictalurus_punctatus
ENSGAFG00000005517	YBX2	100	62.162	ENSMAMG00000003631	YBX2	100	65.465	Mastacembelus_armatus
ENSGAFG00000005517	YBX2	100	60.920	ENSMZEG00005021709	YBX2	100	64.655	Maylandia_zebra
ENSGAFG00000005517	YBX2	100	60.807	ENSNBRG00000021159	YBX2	100	64.080	Neolamprologus_brichardi
ENSGAFG00000005517	YBX2	100	61.739	ENSONIG00000018954	YBX2	100	64.368	Oreochromis_niloticus
ENSGAFG00000005517	YBX2	100	64.583	ENSORLG00020010417	YBX2	88	64.881	Oryzias_latipes_hni
ENSGAFG00000005517	YBX2	100	64.881	ENSORLG00015007322	YBX2	88	65.179	Oryzias_latipes_hsok
ENSGAFG00000005517	YBX2	92	67.508	ENSOMEG00000010455	YBX2	100	66.570	Oryzias_melastigma
ENSGAFG00000005517	YBX2	100	80.120	ENSPFOG00000007181	YBX2	99	83.988	Poecilia_formosa
ENSGAFG00000005517	YBX2	100	83.384	ENSPLAG00000009381	YBX2	99	85.366	Poecilia_latipinna
ENSGAFG00000005517	YBX2	100	83.988	ENSPMEG00000002159	YBX2	99	85.671	Poecilia_mexicana
ENSGAFG00000005517	YBX2	96	84.543	ENSPREG00000013357	YBX2	100	84.940	Poecilia_reticulata
ENSGAFG00000005517	YBX2	100	60.920	ENSPNYG00000006649	YBX2	100	64.655	Pundamilia_nyererei
ENSGAFG00000005517	YBX2	98	55.280	ENSPNAG00000017142	YBX2	94	55.280	Pygocentrus_nattereri
ENSGAFG00000005517	YBX2	100	65.089	ENSSMAG00000009294	YBX2	92	70.418	Scophthalmus_maximus
ENSGAFG00000005517	YBX2	100	67.674	ENSSDUG00000020339	YBX2	100	69.394	Seriola_dumerili
ENSGAFG00000005517	YBX2	100	67.674	ENSSLDG00000010451	YBX2	100	69.394	Seriola_lalandi_dorsalis
ENSGAFG00000005517	YBX2	99	61.747	ENSTRUG00000011813	YBX2	99	61.398	Takifugu_rubripes
ENSGAFG00000005517	YBX2	98	63.889	ENSTNIG00000010139	YBX2	97	62.037	Tetraodon_nigroviridis
ENSGAFG00000005517	YBX2	52	91.176	ENSXCOG00000001831	YBX2	99	91.176	Xiphophorus_couchianus
ENSGAFG00000005517	YBX2	100	92.923	ENSXMAG00000015755	YBX2	100	92.615	Xiphophorus_maculatus