EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005596 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 42619 bases
Position: chrNHOQ01001000.1:2293898-2336516
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008230	AKAP7_NLS	PF10469.9	4.2e-44	1	1
ENSGAFP00000008222	AKAP7_NLS	PF10469.9	4.4e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008306	-	4270	-	ENSGAFP00000008222	518 (aa)	-	-
ENSGAFT00000008314	-	4234	-	ENSGAFP00000008230	506 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005596	-	53	66.790	ENSAPOG00000014954	-	95	66.790	Acanthochromis_polyacanthus
ENSGAFG00000005596	-	62	77.143	ENSAPOG00000016315	-	99	70.685	Acanthochromis_polyacanthus
ENSGAFG00000005596	-	53	66.790	ENSAPOG00000009532	-	95	66.790	Acanthochromis_polyacanthus
ENSGAFG00000005596	-	55	81.786	ENSACIG00000015596	-	98	81.786	Amphilophus_citrinellus
ENSGAFG00000005596	-	100	67.976	ENSAOCG00000011837	-	100	68.173	Amphiprion_ocellaris
ENSGAFG00000005596	-	100	67.059	ENSAPEG00000018569	-	100	67.976	Amphiprion_percula
ENSGAFG00000005596	-	100	68.945	ENSATEG00000002389	-	100	69.336	Anabas_testudineus
ENSGAFG00000005596	-	97	67.787	ENSACLG00000007716	-	100	73.516	Astatotilapia_calliptera
ENSGAFG00000005596	-	100	81.310	ENSFHEG00000000779	-	100	85.747	Fundulus_heteroclitus
ENSGAFG00000005596	-	53	59.259	ENSGACG00000013213	-	100	59.259	Gasterosteus_aculeatus
ENSGAFG00000005596	-	97	68.651	ENSHBUG00000023381	-	100	69.336	Haplochromis_burtoni
ENSGAFG00000005596	-	61	70.093	ENSHCOG00000012429	-	71	70.405	Hippocampus_comes
ENSGAFG00000005596	-	100	71.680	ENSKMAG00000018397	-	100	71.318	Kryptolebias_marmoratus
ENSGAFG00000005596	-	97	65.130	ENSLBEG00000008075	-	100	70.199	Labrus_bergylta
ENSGAFG00000005596	-	100	67.176	ENSMAMG00000014915	-	94	82.913	Mastacembelus_armatus
ENSGAFG00000005596	-	96	69.388	ENSMZEG00005012494	-	100	69.608	Maylandia_zebra
ENSGAFG00000005596	-	86	66.818	ENSNBRG00000022718	-	96	80.968	Neolamprologus_brichardi
ENSGAFG00000005596	-	100	65.966	ENSORLG00000027151	-	100	71.071	Oryzias_latipes
ENSGAFG00000005596	-	100	65.966	ENSORLG00020002225	-	100	70.615	Oryzias_latipes_hni
ENSGAFG00000005596	-	100	65.774	ENSORLG00015020665	-	100	70.843	Oryzias_latipes_hsok
ENSGAFG00000005596	-	100	66.863	ENSOMEG00000019174	-	100	67.319	Oryzias_melastigma
ENSGAFG00000005596	-	100	93.083	ENSPFOG00000010538	-	100	93.083	Poecilia_formosa
ENSGAFG00000005596	-	100	86.293	ENSPLAG00000001022	-	100	86.293	Poecilia_latipinna
ENSGAFG00000005596	-	100	93.243	ENSPMEG00000006595	-	100	93.243	Poecilia_mexicana
ENSGAFG00000005596	-	100	93.050	ENSPREG00000012679	-	100	93.088	Poecilia_reticulata
ENSGAFG00000005596	-	97	67.659	ENSPNYG00000003981	-	100	68.164	Pundamilia_nyererei
ENSGAFG00000005596	-	100	67.323	ENSSMAG00000008633	-	100	72.321	Scophthalmus_maximus
ENSGAFG00000005596	-	100	67.836	ENSSDUG00000010936	-	100	68.359	Seriola_dumerili
ENSGAFG00000005596	-	86	73.227	ENSSLDG00000025505	-	100	73.165	Seriola_lalandi_dorsalis
ENSGAFG00000005596	-	96	66.802	ENSSPAG00000007087	-	100	66.667	Stegastes_partitus
ENSGAFG00000005596	-	60	76.547	ENSTRUG00000014580	-	82	73.927	Takifugu_rubripes
ENSGAFG00000005596	-	60	77.778	ENSTNIG00000010946	-	95	77.778	Tetraodon_nigroviridis
ENSGAFG00000005596	-	54	42.182	ENSXETG00000008240	akap7	60	42.182	Xenopus_tropicalis
ENSGAFG00000005596	-	100	95.174	ENSXMAG00000022180	-	100	95.174	Xiphophorus_maculatus