EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000005628 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
6558 bases
Position
chrNHOQ01002523.1:1428884-1435441
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000008282RRM_1PF00076.222.9e-3513
ENSGAFP00000008282RRM_1PF00076.222.9e-3523
ENSGAFP00000008282RRM_1PF00076.222.9e-3533
ENSGAFP00000008291RRM_1PF00076.223e-3013
ENSGAFP00000008291RRM_1PF00076.223e-3023
ENSGAFP00000008291RRM_1PF00076.223e-3033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000008375-1362-ENSGAFP00000008291453 (aa)--
ENSGAFT00000008366-1679-ENSGAFP00000008282459 (aa)--
Gene Model
Click here to download ENSGAFG00000005628's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005628's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000005628-10075.906ENSGAFG00000013626u2af2a8875.810
ENSGAFG00000005628-6539.175ENSGAFG00000004334-5837.255
ENSGAFG00000005628-6937.500ENSGAFG00000021040puf60b5437.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000005628-10072.766ENSG00000063244U2AF29983.007Homo_sapiens
ENSGAFG00000005628-7074.405ENSAPOG00000023155u2af2a9977.640Acanthochromis_polyacanthus
ENSGAFG00000005628-10092.918ENSAPOG00000002208-10093.562Acanthochromis_polyacanthus
ENSGAFG00000005628-7879.282ENSAMEG00000003864U2AF28780.112Ailuropoda_melanoleuca
ENSGAFG00000005628-8281.579ENSACIG00000005749u2af2a9280.556Amphilophus_citrinellus
ENSGAFG00000005628-9790.414ENSACIG00000014173-9991.068Amphilophus_citrinellus
ENSGAFG00000005628-10093.348ENSAOCG00000003595-10093.991Amphiprion_ocellaris
ENSGAFG00000005628-10075.906ENSAOCG00000015571u2af2a10076.026Amphiprion_ocellaris
ENSGAFG00000005628-9890.989ENSAPEG00000020062-9891.170Amphiprion_percula
ENSGAFG00000005628-8281.842ENSAPEG00000009376u2af2a9380.808Amphiprion_percula
ENSGAFG00000005628-10076.119ENSATEG00000022332u2af2a9975.267Anabas_testudineus
ENSGAFG00000005628-9792.889ENSATEG00000020577-9993.556Anabas_testudineus
ENSGAFG00000005628-10073.077ENSACAG00000015489U2AF29974.786Anolis_carolinensis
ENSGAFG00000005628-10070.523ENSANAG00000028042U2AF29973.278Aotus_nancymaae
ENSGAFG00000005628-10075.693ENSACLG00000022181u2af2a9975.267Astatotilapia_calliptera
ENSGAFG00000005628-10093.133ENSACLG00000020793-10093.777Astatotilapia_calliptera
ENSGAFG00000005628-10073.160ENSAMXG00000039454u2af2b9974.459Astyanax_mexicanus
ENSGAFG00000005628-10070.913ENSAMXG00000033347u2af2a9972.034Astyanax_mexicanus
ENSGAFG00000005628-10073.102ENSBTAG00000002830U2AF29975.108Bos_taurus
ENSGAFG00000005628-8557.545WBGene00006697uaf-110054.795Caenorhabditis_elegans
ENSGAFG00000005628-10072.363ENSCJAG00000017128U2AF29973.840Callithrix_jacchus
ENSGAFG00000005628-10072.766ENSCAFG00000002551U2AF29974.255Canis_familiaris
ENSGAFG00000005628-8581.156ENSCAFG00020015445U2AF28381.156Canis_lupus_dingo
ENSGAFG00000005628-8568.080ENSCHIG00000023595U2AF29963.656Capra_hircus
ENSGAFG00000005628-10072.363ENSTSYG00000007432U2AF29973.840Carlito_syrichta
ENSGAFG00000005628-8879.657ENSCAPG00000008466U2AF28880.397Cavia_aperea
ENSGAFG00000005628-10072.363ENSCPOG00000001582U2AF29973.840Cavia_porcellus
ENSGAFG00000005628-10072.363ENSCCAG00000023336U2AF29973.840Cebus_capucinus
ENSGAFG00000005628-10072.766ENSCATG00000004637U2AF29974.255Cercocebus_atys
ENSGAFG00000005628-10072.766ENSCLAG00000000596U2AF29974.255Chinchilla_lanigera
ENSGAFG00000005628-10072.766ENSCSAG00000001722U2AF29974.255Chlorocebus_sabaeus
ENSGAFG00000005628-8878.554ENSCPBG00000004485U2AF29983.007Chrysemys_picta_bellii
ENSGAFG00000005628-8470.103ENSCING00000003455-8368.750Ciona_intestinalis
ENSGAFG00000005628-8568.462ENSCSAVG00000006813-8767.250Ciona_savignyi
ENSGAFG00000005628-10068.000ENSCANG00000043845-9971.429Colobus_angolensis_palliatus
ENSGAFG00000005628-9171.963ENSCANG00000031002-9673.598Colobus_angolensis_palliatus
ENSGAFG00000005628-10073.102ENSCGRG00001003185-9975.108Cricetulus_griseus_chok1gshd
ENSGAFG00000005628-10069.723ENSCGRG00001007486-9968.922Cricetulus_griseus_chok1gshd
ENSGAFG00000005628-5081.897ENSCGRG00000004524-7979.098Cricetulus_griseus_crigri
ENSGAFG00000005628-10069.723ENSCGRG00000018587-9968.922Cricetulus_griseus_crigri
ENSGAFG00000005628-6574.825ENSCSEG00000018709u2af2a8274.359Cynoglossus_semilaevis
ENSGAFG00000005628-10088.578ENSCSEG00000020504-9487.284Cynoglossus_semilaevis
ENSGAFG00000005628-10075.906ENSCVAG00000001259u2af2a9975.810Cyprinodon_variegatus
ENSGAFG00000005628-10093.133ENSCVAG00000023307-10093.777Cyprinodon_variegatus
ENSGAFG00000005628-10073.276ENSDARG00000012505u2af2a9973.118Danio_rerio
ENSGAFG00000005628-10071.730ENSDARG00000011740u2af2b9972.632Danio_rerio
ENSGAFG00000005628-9171.963ENSDNOG00000047039U2AF29673.598Dasypus_novemcinctus
ENSGAFG00000005628-10072.363ENSDORG00000003250U2af29973.840Dipodomys_ordii
ENSGAFG00000005628-8852.000FBgn0034834LS28553.924Drosophila_melanogaster
ENSGAFG00000005628-8472.494FBgn0005411U2af5010071.739Drosophila_melanogaster
ENSGAFG00000005628-9071.875ENSEBUG00000010917U2AF210067.452Eptatretus_burgeri
ENSGAFG00000005628-8863.570ENSEBUG00000001732U2AF29759.471Eptatretus_burgeri
ENSGAFG00000005628-8580.905ENSEASG00005020708U2AF27880.905Equus_asinus_asinus
ENSGAFG00000005628-10073.102ENSECAG00000010110U2AF29975.108Equus_caballus
ENSGAFG00000005628-10071.922ENSELUG00000022291u2af2b9972.163Esox_lucius
ENSGAFG00000005628-10074.686ENSELUG00000015850u2af2a9973.849Esox_lucius
ENSGAFG00000005628-10088.412ENSELUG00000018459-10088.841Esox_lucius
ENSGAFG00000005628-10072.363ENSFCAG00000011504U2AF29973.840Felis_catus
ENSGAFG00000005628-8879.657ENSFDAG00000011264U2AF28580.397Fukomys_damarensis
ENSGAFG00000005628-10075.378ENSFHEG00000016025u2af2a9975.810Fundulus_heteroclitus
ENSGAFG00000005628-10073.434ENSGMOG00000004535u2af2a9974.732Gadus_morhua
ENSGAFG00000005628-9873.085ENSGALG00000052748U2AF26574.836Gallus_gallus
ENSGAFG00000005628-10087.212ENSGACG00000014500-10085.774Gasterosteus_aculeatus
ENSGAFG00000005628-10073.319ENSGACG00000010632U2AF29975.162Gasterosteus_aculeatus
ENSGAFG00000005628-7079.375ENSGAGG00000011849U2AF29983.007Gopherus_agassizii
ENSGAFG00000005628-5969.630ENSGGOG00000036399-9673.438Gorilla_gorilla
ENSGAFG00000005628-10093.133ENSHBUG00000017424-10093.777Haplochromis_burtoni
ENSGAFG00000005628-10075.693ENSHBUG00000013935u2af2a9975.267Haplochromis_burtoni
ENSGAFG00000005628-10072.363ENSHGLG00000005889U2AF29973.840Heterocephalus_glaber_female
ENSGAFG00000005628-8879.657ENSHGLG00100004757U2AF28880.397Heterocephalus_glaber_male
ENSGAFG00000005628-10072.163ENSHCOG00000019367u2af2a9974.468Hippocampus_comes
ENSGAFG00000005628-10070.779ENSIPUG00000007717u2af2a9972.863Ictalurus_punctatus
ENSGAFG00000005628-10072.944ENSIPUG00000009077u2af29973.774Ictalurus_punctatus
ENSGAFG00000005628-10087.582ENSIPUG00000009844-10087.582Ictalurus_punctatus
ENSGAFG00000005628-10072.363ENSSTOG00000019595U2AF29973.840Ictidomys_tridecemlineatus
ENSGAFG00000005628-10072.363ENSJJAG00000017705U2af29973.840Jaculus_jaculus
ENSGAFG00000005628-10076.119ENSKMAG00000005960u2af2a9975.267Kryptolebias_marmoratus
ENSGAFG00000005628-9789.325ENSLBEG00000005001-9989.978Labrus_bergylta
ENSGAFG00000005628-10076.333ENSLBEG00000016162u2af2a9976.242Labrus_bergylta
ENSGAFG00000005628-7981.967ENSLACG00000001648U2AF29981.967Latimeria_chalumnae
ENSGAFG00000005628-10089.914ENSLOCG00000010843-10089.700Lepisosteus_oculatus
ENSGAFG00000005628-6082.609ENSLOCG00000008050u2af2b8181.338Lepisosteus_oculatus
ENSGAFG00000005628-10072.979ENSLAFG00000018056-9974.894Loxodonta_africana
ENSGAFG00000005628-10068.511ENSLAFG00000028496-9966.596Loxodonta_africana
ENSGAFG00000005628-10072.363ENSMFAG00000038383U2AF29973.840Macaca_fascicularis
ENSGAFG00000005628-10072.152ENSMMUG00000004810U2AF29973.629Macaca_mulatta
ENSGAFG00000005628-10072.766ENSMNEG00000042096U2AF29974.255Macaca_nemestrina
ENSGAFG00000005628-8880.198ENSMLEG00000032219U2AF27880.952Mandrillus_leucophaeus
ENSGAFG00000005628-10073.504ENSMAMG00000019817u2af2a9974.840Mastacembelus_armatus
ENSGAFG00000005628-10090.987ENSMAMG00000020158-10091.845Mastacembelus_armatus
ENSGAFG00000005628-10075.693ENSMZEG00005016563u2af2a9975.810Maylandia_zebra
ENSGAFG00000005628-10093.133ENSMZEG00005023318-10093.777Maylandia_zebra
ENSGAFG00000005628-8879.657ENSMAUG00000008180U2af28680.397Mesocricetus_auratus
ENSGAFG00000005628-10072.766ENSMICG00000027681U2AF29974.255Microcebus_murinus
ENSGAFG00000005628-10072.363ENSMOCG00000013214-9973.840Microtus_ochrogaster
ENSGAFG00000005628-7077.188ENSMOCG00000001018-9980.719Microtus_ochrogaster
ENSGAFG00000005628-10069.528ENSMOCG00000007227-9968.026Microtus_ochrogaster
ENSGAFG00000005628-8281.842ENSMMOG00000016600u2af2a9180.808Mola_mola
ENSGAFG00000005628-10078.992ENSMMOG00000000531-10079.070Mola_mola
ENSGAFG00000005628-10074.514ENSMALG00000009985u2af2a9975.378Monopterus_albus
ENSGAFG00000005628-10072.766MGP_CAROLIEiJ_G0029150U2af29974.255Mus_caroli
ENSGAFG00000005628-10072.766ENSMUSG00000030435U2af29983.007Mus_musculus
ENSGAFG00000005628-10072.766MGP_PahariEiJ_G0021017U2af29974.255Mus_pahari
ENSGAFG00000005628-10072.766MGP_SPRETEiJ_G0030203U2af29974.255Mus_spretus
ENSGAFG00000005628-10072.766ENSMPUG00000007135U2AF29974.255Mustela_putorius_furo
ENSGAFG00000005628-5178.333ENSMLUG00000011051-9978.333Myotis_lucifugus
ENSGAFG00000005628-10072.363ENSNGAG00000020369U2af29973.840Nannospalax_galili
ENSGAFG00000005628-9791.068ENSNBRG00000011100-9991.721Neolamprologus_brichardi
ENSGAFG00000005628-10075.693ENSNBRG00000002568u2af2a9975.267Neolamprologus_brichardi
ENSGAFG00000005628-10065.116ENSNLEG00000010562U2AF29983.007Nomascus_leucogenys
ENSGAFG00000005628-8868.317ENSMEUG00000002346U2AF28670.077Notamacropus_eugenii
ENSGAFG00000005628-10067.300ENSODEG00000012729-9968.776Octodon_degus
ENSGAFG00000005628-9856.923ENSODEG00000009254-9956.264Octodon_degus
ENSGAFG00000005628-10075.424ENSONIG00000012793u2af2a9975.000Oreochromis_niloticus
ENSGAFG00000005628-10093.133ENSONIG00000009682-10093.777Oreochromis_niloticus
ENSGAFG00000005628-10073.774ENSORLG00000011545u2af2a9972.842Oryzias_latipes
ENSGAFG00000005628-10073.774ENSORLG00020006941u2af2a9972.842Oryzias_latipes_hni
ENSGAFG00000005628-10073.774ENSORLG00015012843u2af2a9972.842Oryzias_latipes_hsok
ENSGAFG00000005628-10076.496ENSOMEG00000011386u2af2a9975.855Oryzias_melastigma
ENSGAFG00000005628-8354.780ENSOGAG00000034729-7856.868Otolemur_garnettii
ENSGAFG00000005628-10072.363ENSOGAG00000007206-9973.840Otolemur_garnettii
ENSGAFG00000005628-10067.983ENSOARG00000001091U2AF29968.000Ovis_aries
ENSGAFG00000005628-10072.363ENSPPAG00000039782U2AF29973.840Pan_paniscus
ENSGAFG00000005628-10072.363ENSPPRG00000013843U2AF29973.840Panthera_pardus
ENSGAFG00000005628-9969.913ENSPTIG00000005489U2AF28775.990Panthera_tigris_altaica
ENSGAFG00000005628-10072.363ENSPTRG00000011523U2AF29983.007Pan_troglodytes
ENSGAFG00000005628-10072.766ENSPANG00000008459U2AF29974.255Papio_anubis
ENSGAFG00000005628-10072.650ENSPKIG00000024346u2af2b9179.899Paramormyrops_kingsleyae
ENSGAFG00000005628-10089.270ENSPKIG00000014878-10087.768Paramormyrops_kingsleyae
ENSGAFG00000005628-8560.636ENSPSIG00000008014U2AF28760.636Pelodiscus_sinensis
ENSGAFG00000005628-8274.615ENSPMGG00000022980u2af2a9073.892Periophthalmus_magnuspinnatus
ENSGAFG00000005628-10072.363ENSPEMG00000007378U2af29983.007Peromyscus_maniculatus_bairdii
ENSGAFG00000005628-8278.125ENSPMAG00000004097u2af2a8878.465Petromyzon_marinus
ENSGAFG00000005628-10072.363ENSPCIG00000018013U2AF29973.840Phascolarctos_cinereus
ENSGAFG00000005628-10075.906ENSPFOG00000010799u2af2a10075.480Poecilia_formosa
ENSGAFG00000005628-10098.475ENSPFOG00000006433-10098.475Poecilia_formosa
ENSGAFG00000005628-10075.906ENSPLAG00000014365u2af2a9975.810Poecilia_latipinna
ENSGAFG00000005628-9798.420ENSPLAG00000003275-9898.420Poecilia_latipinna
ENSGAFG00000005628-9797.968ENSPMEG00000003734-9897.968Poecilia_mexicana
ENSGAFG00000005628-10075.906ENSPMEG00000002969u2af2a9975.810Poecilia_mexicana
ENSGAFG00000005628-10075.906ENSPREG00000008739u2af2a9975.480Poecilia_reticulata
ENSGAFG00000005628-10096.996ENSPREG00000013036-10097.945Poecilia_reticulata
ENSGAFG00000005628-6277.778ENSPPYG00000010429-7781.752Pongo_abelii
ENSGAFG00000005628-10058.737ENSPCAG00000014399-9960.842Procavia_capensis
ENSGAFG00000005628-8870.545ENSPCAG00000003709-9672.194Procavia_capensis
ENSGAFG00000005628-10072.363ENSPCOG00000025870U2AF29973.840Propithecus_coquereli
ENSGAFG00000005628-10072.152ENSPVAG00000004540U2AF29973.629Pteropus_vampyrus
ENSGAFG00000005628-10093.133ENSPNYG00000011605-10093.777Pundamilia_nyererei
ENSGAFG00000005628-10075.693ENSPNYG00000001438u2af2a9975.267Pundamilia_nyererei
ENSGAFG00000005628-10090.129ENSPNAG00000007182-10090.773Pygocentrus_nattereri
ENSGAFG00000005628-10072.258ENSPNAG00000017620u2af2a9973.932Pygocentrus_nattereri
ENSGAFG00000005628-10073.377ENSPNAG00000027289u2af2b9974.675Pygocentrus_nattereri
ENSGAFG00000005628-10072.766ENSRNOG00000015914U2af29974.255Rattus_norvegicus
ENSGAFG00000005628-10072.152ENSRBIG00000041018U2AF29973.629Rhinopithecus_bieti
ENSGAFG00000005628-10068.487ENSRROG00000031238-9970.426Rhinopithecus_roxellana
ENSGAFG00000005628-8076.227ENSRROG00000031103-8780.556Rhinopithecus_roxellana
ENSGAFG00000005628-10072.766ENSSBOG00000023891U2AF29974.255Saimiri_boliviensis_boliviensis
ENSGAFG00000005628-5271.329ENSSHAG00000001167U2AF26671.329Sarcophilus_harrisii
ENSGAFG00000005628-10089.270ENSSFOG00015003884-10088.412Scleropages_formosus
ENSGAFG00000005628-8681.061ENSSFOG00015019182u2af2b8981.061Scleropages_formosus
ENSGAFG00000005628-10075.594ENSSMAG00000012582u2af2a9975.594Scophthalmus_maximus
ENSGAFG00000005628-10091.631ENSSMAG00000013779-10092.275Scophthalmus_maximus
ENSGAFG00000005628-10075.693ENSSDUG00000009457u2af2a10075.810Seriola_dumerili
ENSGAFG00000005628-9791.106ENSSDUG00000021434-9491.757Seriola_dumerili
ENSGAFG00000005628-10075.693ENSSLDG00000022742u2af2a9975.810Seriola_lalandi_dorsalis
ENSGAFG00000005628-9791.106ENSSLDG00000016151-9991.757Seriola_lalandi_dorsalis
ENSGAFG00000005628-10072.093ENSSPUG00000010229U2AF29973.573Sphenodon_punctatus
ENSGAFG00000005628-10075.906ENSSPAG00000022519u2af2a9975.480Stegastes_partitus
ENSGAFG00000005628-10093.133ENSSPAG00000005241-10093.777Stegastes_partitus
ENSGAFG00000005628-10073.102ENSSSCG00000034815U2AF29975.108Sus_scrofa
ENSGAFG00000005628-8279.737ENSTRUG00000005514u2af2a8878.788Takifugu_rubripes
ENSGAFG00000005628-10088.937ENSTNIG00000011257-10088.043Tetraodon_nigroviridis
ENSGAFG00000005628-10075.641ENSTNIG00000008106U2AF29973.932Tetraodon_nigroviridis
ENSGAFG00000005628-7877.135ENSTBEG00000009104U2AF29877.933Tupaia_belangeri
ENSGAFG00000005628-10072.363ENSTTRG00000000987U2AF29973.840Tursiops_truncatus
ENSGAFG00000005628-8580.905ENSUAMG00000019883U2AF28780.905Ursus_americanus
ENSGAFG00000005628-8580.905ENSUMAG00000024586U2AF29983.007Ursus_maritimus
ENSGAFG00000005628-8880.198ENSVVUG00000006956U2AF26080.702Vulpes_vulpes
ENSGAFG00000005628-10074.681ENSXETG00000019128u2af29973.885Xenopus_tropicalis
ENSGAFG00000005628-8281.842ENSXCOG00000019406u2af2a9080.808Xiphophorus_couchianus
ENSGAFG00000005628-10096.567ENSXMAG00000000768-9696.567Xiphophorus_maculatus
ENSGAFG00000005628-10075.906ENSXMAG00000011979u2af2a9975.810Xiphophorus_maculatus

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