EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000005677 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6476 bases
Position: chrNHOQ01000074.1:341719-348194
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008354	MMR_HSR1	PF01926.23	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008438	-	2740	-	ENSGAFP00000008354	451 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000005677	si:ch211-11k18.4	99	59.333	ENSGAFG00000012362	si:dkey-98f17.5	89	59.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005677	si:ch211-11k18.4	99	60.667	ENSAPOG00000010378	si:dkey-98f17.5	100	60.667	Acanthochromis_polyacanthus
ENSGAFG00000005677	si:ch211-11k18.4	100	87.583	ENSAPOG00000018833	si:ch211-11k18.4	100	87.583	Acanthochromis_polyacanthus
ENSGAFG00000005677	si:ch211-11k18.4	99	85.333	ENSACIG00000006696	si:ch211-11k18.4	99	85.333	Amphilophus_citrinellus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSACIG00000017719	si:dkey-98f17.5	100	59.778	Amphilophus_citrinellus
ENSGAFG00000005677	si:ch211-11k18.4	99	60.889	ENSAOCG00000008661	si:dkey-98f17.5	100	60.889	Amphiprion_ocellaris
ENSGAFG00000005677	si:ch211-11k18.4	100	88.248	ENSAOCG00000014284	si:ch211-11k18.4	100	88.248	Amphiprion_ocellaris
ENSGAFG00000005677	si:ch211-11k18.4	100	88.027	ENSAPEG00000014910	si:ch211-11k18.4	100	88.027	Amphiprion_percula
ENSGAFG00000005677	si:ch211-11k18.4	99	60.667	ENSAPEG00000022447	si:dkey-98f17.5	100	60.667	Amphiprion_percula
ENSGAFG00000005677	si:ch211-11k18.4	99	60.444	ENSATEG00000007188	si:dkey-98f17.5	100	60.444	Anabas_testudineus
ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	ENSATEG00000004775	si:ch211-11k18.4	100	86.918	Anabas_testudineus
ENSGAFG00000005677	si:ch211-11k18.4	99	64.126	ENSACAG00000028632	-	98	64.126	Anolis_carolinensis
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSACLG00000001308	si:dkey-98f17.5	100	59.778	Astatotilapia_calliptera
ENSGAFG00000005677	si:ch211-11k18.4	100	86.253	ENSACLG00000007907	si:ch211-11k18.4	100	86.253	Astatotilapia_calliptera
ENSGAFG00000005677	si:ch211-11k18.4	99	60.222	ENSAMXG00000001190	si:dkey-98f17.5	100	60.222	Astyanax_mexicanus
ENSGAFG00000005677	si:ch211-11k18.4	99	81.333	ENSAMXG00000017817	si:ch211-11k18.4	100	81.333	Astyanax_mexicanus
ENSGAFG00000005677	si:ch211-11k18.4	83	60.477	ENSCING00000020807	-	99	60.477	Ciona_intestinalis
ENSGAFG00000005677	si:ch211-11k18.4	99	58.667	ENSCSAVG00000009987	-	100	58.667	Ciona_savignyi
ENSGAFG00000005677	si:ch211-11k18.4	99	59.333	ENSCSEG00000017512	si:dkey-98f17.5	98	59.670	Cynoglossus_semilaevis
ENSGAFG00000005677	si:ch211-11k18.4	100	81.596	ENSCSEG00000017661	si:ch211-11k18.4	100	81.596	Cynoglossus_semilaevis
ENSGAFG00000005677	si:ch211-11k18.4	100	90.687	ENSCVAG00000015346	si:ch211-11k18.4	100	90.687	Cyprinodon_variegatus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.556	ENSCVAG00000011351	si:dkey-98f17.5	100	59.556	Cyprinodon_variegatus
ENSGAFG00000005677	si:ch211-11k18.4	98	59.637	ENSDARG00000068863	si:dkey-98f17.5	100	59.637	Danio_rerio
ENSGAFG00000005677	si:ch211-11k18.4	99	80.444	ENSDARG00000087869	si:ch211-11k18.4	100	87.755	Danio_rerio
ENSGAFG00000005677	si:ch211-11k18.4	79	60.000	ENSEBUG00000007620	si:dkey-98f17.5	89	62.162	Eptatretus_burgeri
ENSGAFG00000005677	si:ch211-11k18.4	99	60.089	ENSELUG00000003365	si:dkey-98f17.5	100	60.089	Esox_lucius
ENSGAFG00000005677	si:ch211-11k18.4	100	87.805	ENSFHEG00000019820	si:ch211-11k18.4	100	87.805	Fundulus_heteroclitus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.556	ENSFHEG00000012744	si:dkey-98f17.5	100	59.556	Fundulus_heteroclitus
ENSGAFG00000005677	si:ch211-11k18.4	90	76.238	ENSGMOG00000003492	si:ch211-11k18.4	100	76.238	Gadus_morhua
ENSGAFG00000005677	si:ch211-11k18.4	58	73.462	ENSGACG00000009399	si:dkey-98f17.5	100	73.462	Gasterosteus_aculeatus
ENSGAFG00000005677	si:ch211-11k18.4	90	86.139	ENSGACG00000013134	si:ch211-11k18.4	100	86.139	Gasterosteus_aculeatus
ENSGAFG00000005677	si:ch211-11k18.4	100	86.475	ENSHBUG00000020638	si:ch211-11k18.4	100	86.475	Haplochromis_burtoni
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSHBUG00000008331	si:dkey-98f17.5	100	59.778	Haplochromis_burtoni
ENSGAFG00000005677	si:ch211-11k18.4	99	57.175	ENSHCOG00000016505	si:dkey-98f17.5	98	56.347	Hippocampus_comes
ENSGAFG00000005677	si:ch211-11k18.4	99	85.111	ENSHCOG00000014773	si:ch211-11k18.4	100	85.111	Hippocampus_comes
ENSGAFG00000005677	si:ch211-11k18.4	90	66.584	ENSIPUG00000016694	si:ch211-11k18.4	84	68.586	Ictalurus_punctatus
ENSGAFG00000005677	si:ch211-11k18.4	96	75.463	ENSIPUG00000016678	si:ch211-11k18.4	99	75.463	Ictalurus_punctatus
ENSGAFG00000005677	si:ch211-11k18.4	99	57.743	ENSIPUG00000019981	si:dkey-98f17.5	100	57.330	Ictalurus_punctatus
ENSGAFG00000005677	si:ch211-11k18.4	99	87.556	ENSKMAG00000009327	si:ch211-11k18.4	99	87.556	Kryptolebias_marmoratus
ENSGAFG00000005677	si:ch211-11k18.4	99	58.889	ENSKMAG00000014997	si:dkey-98f17.5	100	58.667	Kryptolebias_marmoratus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSLBEG00000012756	si:dkey-98f17.5	100	59.778	Labrus_bergylta
ENSGAFG00000005677	si:ch211-11k18.4	98	58.108	ENSLACG00000017433	si:dkey-98f17.5	98	58.108	Latimeria_chalumnae
ENSGAFG00000005677	si:ch211-11k18.4	99	61.915	ENSLACG00000004899	-	99	61.915	Latimeria_chalumnae
ENSGAFG00000005677	si:ch211-11k18.4	99	70.510	ENSLACG00000006280	si:ch211-11k18.4	100	70.510	Latimeria_chalumnae
ENSGAFG00000005677	si:ch211-11k18.4	99	59.867	ENSLOCG00000003824	si:dkey-98f17.5	99	59.867	Lepisosteus_oculatus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.556	ENSMAMG00000014528	si:dkey-98f17.5	100	59.556	Mastacembelus_armatus
ENSGAFG00000005677	si:ch211-11k18.4	96	87.500	ENSMAMG00000002536	si:ch211-11k18.4	99	87.500	Mastacembelus_armatus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSMZEG00005016572	si:dkey-98f17.5	100	59.778	Maylandia_zebra
ENSGAFG00000005677	si:ch211-11k18.4	100	86.031	ENSMZEG00005008941	si:ch211-11k18.4	100	86.031	Maylandia_zebra
ENSGAFG00000005677	si:ch211-11k18.4	100	79.601	ENSMMOG00000012485	si:ch211-11k18.4	100	79.601	Mola_mola
ENSGAFG00000005677	si:ch211-11k18.4	98	60.455	ENSMALG00000012761	si:dkey-98f17.5	100	60.909	Monopterus_albus
ENSGAFG00000005677	si:ch211-11k18.4	100	85.144	ENSMALG00000019735	si:ch211-11k18.4	100	85.144	Monopterus_albus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.465	ENSNBRG00000006068	si:dkey-98f17.5	100	59.465	Neolamprologus_brichardi
ENSGAFG00000005677	si:ch211-11k18.4	96	86.343	ENSNBRG00000002220	si:ch211-11k18.4	98	86.343	Neolamprologus_brichardi
ENSGAFG00000005677	si:ch211-11k18.4	99	60.000	ENSONIG00000013568	si:dkey-98f17.5	100	60.000	Oreochromis_niloticus
ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	ENSONIG00000019412	si:ch211-11k18.4	100	86.918	Oreochromis_niloticus
ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	ENSORLG00000012015	si:ch211-11k18.4	100	86.918	Oryzias_latipes
ENSGAFG00000005677	si:ch211-11k18.4	91	60.732	ENSORLG00000007958	si:dkey-98f17.5	95	60.732	Oryzias_latipes
ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	ENSORLG00020012386	si:ch211-11k18.4	100	86.918	Oryzias_latipes_hni
ENSGAFG00000005677	si:ch211-11k18.4	99	59.111	ENSORLG00020013350	si:dkey-98f17.5	100	59.111	Oryzias_latipes_hni
ENSGAFG00000005677	si:ch211-11k18.4	100	87.140	ENSORLG00015022862	si:ch211-11k18.4	100	87.140	Oryzias_latipes_hsok
ENSGAFG00000005677	si:ch211-11k18.4	99	59.111	ENSORLG00015002000	si:dkey-98f17.5	100	59.111	Oryzias_latipes_hsok
ENSGAFG00000005677	si:ch211-11k18.4	99	59.333	ENSOMEG00000003154	si:dkey-98f17.5	100	59.333	Oryzias_melastigma
ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	ENSOMEG00000018686	si:ch211-11k18.4	100	86.918	Oryzias_melastigma
ENSGAFG00000005677	si:ch211-11k18.4	99	60.754	ENSPKIG00000024621	si:dkey-98f17.5	100	60.754	Paramormyrops_kingsleyae
ENSGAFG00000005677	si:ch211-11k18.4	99	79.556	ENSPKIG00000018807	si:ch211-11k18.4	100	79.556	Paramormyrops_kingsleyae
ENSGAFG00000005677	si:ch211-11k18.4	99	76.667	ENSPKIG00000023918	-	98	76.667	Paramormyrops_kingsleyae
ENSGAFG00000005677	si:ch211-11k18.4	99	59.111	ENSPMGG00000019065	si:dkey-98f17.5	100	59.111	Periophthalmus_magnuspinnatus
ENSGAFG00000005677	si:ch211-11k18.4	100	86.031	ENSPMGG00000016507	si:ch211-11k18.4	100	86.031	Periophthalmus_magnuspinnatus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.382	ENSPFOG00000015142	si:dkey-98f17.5	100	59.382	Poecilia_formosa
ENSGAFG00000005677	si:ch211-11k18.4	100	94.678	ENSPFOG00000007976	si:ch211-11k18.4	100	94.678	Poecilia_formosa
ENSGAFG00000005677	si:ch211-11k18.4	100	94.457	ENSPLAG00000019794	si:ch211-11k18.4	100	94.457	Poecilia_latipinna
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSPLAG00000003709	si:dkey-98f17.5	100	59.778	Poecilia_latipinna
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSPMEG00000018709	si:dkey-98f17.5	94	59.778	Poecilia_mexicana
ENSGAFG00000005677	si:ch211-11k18.4	100	94.457	ENSPMEG00000024198	si:ch211-11k18.4	100	94.457	Poecilia_mexicana
ENSGAFG00000005677	si:ch211-11k18.4	98	59.545	ENSPREG00000000708	si:dkey-98f17.5	100	59.545	Poecilia_reticulata
ENSGAFG00000005677	si:ch211-11k18.4	93	89.647	ENSPREG00000015319	si:ch211-11k18.4	97	89.647	Poecilia_reticulata
ENSGAFG00000005677	si:ch211-11k18.4	100	86.475	ENSPNYG00000017099	si:ch211-11k18.4	100	86.475	Pundamilia_nyererei
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSPNYG00000017266	si:dkey-98f17.5	100	59.778	Pundamilia_nyererei
ENSGAFG00000005677	si:ch211-11k18.4	99	60.667	ENSPNAG00000021352	si:dkey-98f17.5	100	60.667	Pygocentrus_nattereri
ENSGAFG00000005677	si:ch211-11k18.4	99	82.851	ENSPNAG00000022138	si:ch211-11k18.4	99	82.851	Pygocentrus_nattereri
ENSGAFG00000005677	si:ch211-11k18.4	99	77.060	ENSSFOG00015000985	si:ch211-11k18.4	94	77.060	Scleropages_formosus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.202	ENSSFOG00015017965	si:dkey-98f17.5	100	58.444	Scleropages_formosus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.778	ENSSMAG00000011905	si:dkey-98f17.5	100	59.778	Scophthalmus_maximus
ENSGAFG00000005677	si:ch211-11k18.4	100	85.588	ENSSMAG00000009651	si:ch211-11k18.4	100	85.588	Scophthalmus_maximus
ENSGAFG00000005677	si:ch211-11k18.4	100	87.140	ENSSDUG00000016411	si:ch211-11k18.4	100	87.140	Seriola_dumerili
ENSGAFG00000005677	si:ch211-11k18.4	98	59.326	ENSSDUG00000013457	si:dkey-98f17.5	99	59.326	Seriola_dumerili
ENSGAFG00000005677	si:ch211-11k18.4	100	87.140	ENSSLDG00000019145	si:ch211-11k18.4	100	87.140	Seriola_lalandi_dorsalis
ENSGAFG00000005677	si:ch211-11k18.4	98	59.101	ENSSLDG00000025395	si:dkey-98f17.5	99	59.101	Seriola_lalandi_dorsalis
ENSGAFG00000005677	si:ch211-11k18.4	87	65.736	ENSSPUG00000010096	-	99	65.736	Sphenodon_punctatus
ENSGAFG00000005677	si:ch211-11k18.4	99	60.667	ENSSPAG00000018800	si:dkey-98f17.5	100	60.667	Stegastes_partitus
ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	ENSSPAG00000010697	si:ch211-11k18.4	100	86.918	Stegastes_partitus
ENSGAFG00000005677	si:ch211-11k18.4	99	58.889	ENSTRUG00000021287	si:dkey-98f17.5	100	58.889	Takifugu_rubripes
ENSGAFG00000005677	si:ch211-11k18.4	100	84.922	ENSTRUG00000020291	si:ch211-11k18.4	100	84.922	Takifugu_rubripes
ENSGAFG00000005677	si:ch211-11k18.4	99	66.372	ENSXETG00000031783	-	99	66.372	Xenopus_tropicalis
ENSGAFG00000005677	si:ch211-11k18.4	99	59.688	ENSXCOG00000017002	si:dkey-98f17.5	100	59.688	Xiphophorus_couchianus
ENSGAFG00000005677	si:ch211-11k18.4	100	88.692	ENSXCOG00000018094	si:ch211-11k18.4	100	88.248	Xiphophorus_couchianus
ENSGAFG00000005677	si:ch211-11k18.4	100	95.344	ENSXMAG00000021235	si:ch211-11k18.4	100	95.344	Xiphophorus_maculatus
ENSGAFG00000005677	si:ch211-11k18.4	99	59.333	ENSXMAG00000007688	si:dkey-98f17.5	95	59.333	Xiphophorus_maculatus