EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005681 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3695 bases
Position: chrNHOQ01000621.1:1377068-1380762
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008348	Cgr1	PF03879.14	9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008432	-	2719	-	ENSGAFP00000008348	294 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005681	si:ch211-217k17.7	52	58.125	ENSG00000110104	CCDC86	90	64.894	Homo_sapiens
ENSGAFG00000005681	si:ch211-217k17.7	100	66.000	ENSAPOG00000010968	si:ch211-217k17.7	100	66.000	Acanthochromis_polyacanthus
ENSGAFG00000005681	si:ch211-217k17.7	67	49.275	ENSAMEG00000007330	CCDC86	54	49.275	Ailuropoda_melanoleuca
ENSGAFG00000005681	si:ch211-217k17.7	100	62.500	ENSACIG00000020679	si:ch211-217k17.7	88	60.197	Amphilophus_citrinellus
ENSGAFG00000005681	si:ch211-217k17.7	100	65.886	ENSAOCG00000006303	si:ch211-217k17.7	100	65.886	Amphiprion_ocellaris
ENSGAFG00000005681	si:ch211-217k17.7	100	65.436	ENSAPEG00000015364	si:ch211-217k17.7	100	65.436	Amphiprion_percula
ENSGAFG00000005681	si:ch211-217k17.7	100	63.545	ENSATEG00000016386	si:ch211-217k17.7	100	62.876	Anabas_testudineus
ENSGAFG00000005681	si:ch211-217k17.7	51	59.868	ENSACAG00000017814	CCDC86	91	59.868	Anolis_carolinensis
ENSGAFG00000005681	si:ch211-217k17.7	65	51.759	ENSBTAG00000014215	CCDC86	55	51.759	Bos_taurus
ENSGAFG00000005681	si:ch211-217k17.7	65	50.754	ENSCHIG00000014465	CCDC86	55	50.754	Capra_hircus
ENSGAFG00000005681	si:ch211-217k17.7	76	45.417	ENSCPOG00000027361	CCDC86	59	47.525	Cavia_porcellus
ENSGAFG00000005681	si:ch211-217k17.7	67	50.000	ENSCATG00000031881	CCDC86	57	50.000	Cercocebus_atys
ENSGAFG00000005681	si:ch211-217k17.7	67	50.000	ENSCSAG00000006236	CCDC86	57	50.000	Chlorocebus_sabaeus
ENSGAFG00000005681	si:ch211-217k17.7	98	58.249	ENSCSEG00000002637	si:ch211-217k17.7	97	57.576	Cynoglossus_semilaevis
ENSGAFG00000005681	si:ch211-217k17.7	100	73.898	ENSCVAG00000003135	si:ch211-217k17.7	100	73.898	Cyprinodon_variegatus
ENSGAFG00000005681	si:ch211-217k17.7	85	52.191	ENSDARG00000059908	si:ch211-217k17.7	85	48.649	Danio_rerio
ENSGAFG00000005681	si:ch211-217k17.7	65	48.515	ENSDORG00000006899	Ccdc86	61	48.515	Dipodomys_ordii
ENSGAFG00000005681	si:ch211-217k17.7	67	46.269	ENSEEUG00000011844	CCDC86	54	46.269	Erinaceus_europaeus
ENSGAFG00000005681	si:ch211-217k17.7	85	55.344	ENSELUG00000022687	si:ch211-217k17.7	90	50.000	Esox_lucius
ENSGAFG00000005681	si:ch211-217k17.7	85	51.751	ENSGMOG00000016242	-	90	48.339	Gadus_morhua
ENSGAFG00000005681	si:ch211-217k17.7	84	60.081	ENSGACG00000017630	si:ch211-217k17.7	99	58.871	Gasterosteus_aculeatus
ENSGAFG00000005681	si:ch211-217k17.7	94	63.475	ENSHBUG00000010352	si:ch211-217k17.7	100	61.639	Haplochromis_burtoni
ENSGAFG00000005681	si:ch211-217k17.7	100	68.350	ENSKMAG00000000919	si:ch211-217k17.7	99	68.121	Kryptolebias_marmoratus
ENSGAFG00000005681	si:ch211-217k17.7	94	60.498	ENSLBEG00000020547	-	91	58.865	Labrus_bergylta
ENSGAFG00000005681	si:ch211-217k17.7	68	47.867	ENSLAFG00000009449	CCDC86	54	49.485	Loxodonta_africana
ENSGAFG00000005681	si:ch211-217k17.7	67	49.515	ENSMFAG00000036759	CCDC86	57	49.515	Macaca_fascicularis
ENSGAFG00000005681	si:ch211-217k17.7	67	49.515	ENSMMUG00000000019	CCDC86	57	49.515	Macaca_mulatta
ENSGAFG00000005681	si:ch211-217k17.7	67	49.515	ENSMNEG00000034225	CCDC86	57	49.515	Macaca_nemestrina
ENSGAFG00000005681	si:ch211-217k17.7	67	50.000	ENSMLEG00000035102	-	57	50.000	Mandrillus_leucophaeus
ENSGAFG00000005681	si:ch211-217k17.7	93	66.787	ENSMAMG00000016395	si:ch211-217k17.7	92	63.177	Mastacembelus_armatus
ENSGAFG00000005681	si:ch211-217k17.7	100	61.311	ENSMZEG00005019822	si:ch211-217k17.7	100	61.639	Maylandia_zebra
ENSGAFG00000005681	si:ch211-217k17.7	100	59.866	ENSMMOG00000006446	si:ch211-217k17.7	100	58.528	Mola_mola
ENSGAFG00000005681	si:ch211-217k17.7	100	56.667	ENSNBRG00000013330	-	82	83.673	Neolamprologus_brichardi
ENSGAFG00000005681	si:ch211-217k17.7	52	56.875	ENSNLEG00000013582	CCDC86	53	52.062	Nomascus_leucogenys
ENSGAFG00000005681	si:ch211-217k17.7	100	62.333	ENSONIG00000017568	si:ch211-217k17.7	100	62.000	Oreochromis_niloticus
ENSGAFG00000005681	si:ch211-217k17.7	92	58.993	ENSORLG00000006331	-	96	59.353	Oryzias_latipes
ENSGAFG00000005681	si:ch211-217k17.7	92	58.845	ENSORLG00020021345	si:ch211-217k17.7	96	58.484	Oryzias_latipes_hni
ENSGAFG00000005681	si:ch211-217k17.7	92	58.633	ENSORLG00015021538	si:ch211-217k17.7	96	58.993	Oryzias_latipes_hsok
ENSGAFG00000005681	si:ch211-217k17.7	85	53.358	ENSOMEG00000007064	si:ch211-217k17.7	91	49.808	Oryzias_melastigma
ENSGAFG00000005681	si:ch211-217k17.7	65	50.251	ENSOARG00000015563	-	55	50.251	Ovis_aries
ENSGAFG00000005681	si:ch211-217k17.7	67	50.000	ENSPANG00000019203	CCDC86	57	50.000	Papio_anubis
ENSGAFG00000005681	si:ch211-217k17.7	94	45.724	ENSPKIG00000016503	si:ch211-217k17.7	94	45.364	Paramormyrops_kingsleyae
ENSGAFG00000005681	si:ch211-217k17.7	84	60.643	ENSPMGG00000023665	si:ch211-217k17.7	92	56.929	Periophthalmus_magnuspinnatus
ENSGAFG00000005681	si:ch211-217k17.7	98	92.517	ENSPFOG00000011617	si:ch211-217k17.7	99	92.517	Poecilia_formosa
ENSGAFG00000005681	si:ch211-217k17.7	98	92.177	ENSPLAG00000016122	si:ch211-217k17.7	99	92.177	Poecilia_latipinna
ENSGAFG00000005681	si:ch211-217k17.7	100	92.333	ENSPMEG00000018535	si:ch211-217k17.7	100	92.333	Poecilia_mexicana
ENSGAFG00000005681	si:ch211-217k17.7	100	91.000	ENSPREG00000005478	si:ch211-217k17.7	100	91.000	Poecilia_reticulata
ENSGAFG00000005681	si:ch211-217k17.7	71	55.769	ENSPNAG00000010886	si:ch211-217k17.7	85	56.219	Pygocentrus_nattereri
ENSGAFG00000005681	si:ch211-217k17.7	68	45.852	ENSRNOG00000020925	Ccdc86	66	45.852	Rattus_norvegicus
ENSGAFG00000005681	si:ch211-217k17.7	52	57.500	ENSRBIG00000042197	CCDC86	57	49.515	Rhinopithecus_bieti
ENSGAFG00000005681	si:ch211-217k17.7	67	48.544	ENSRROG00000043134	CCDC86	57	48.544	Rhinopithecus_roxellana
ENSGAFG00000005681	si:ch211-217k17.7	93	63.273	ENSSMAG00000007686	si:ch211-217k17.7	91	62.143	Scophthalmus_maximus
ENSGAFG00000005681	si:ch211-217k17.7	89	60.300	ENSSDUG00000002689	si:ch211-217k17.7	94	60.300	Seriola_dumerili
ENSGAFG00000005681	si:ch211-217k17.7	99	61.130	ENSSLDG00000016681	si:ch211-217k17.7	99	61.462	Seriola_lalandi_dorsalis
ENSGAFG00000005681	si:ch211-217k17.7	100	65.886	ENSSPAG00000000367	si:ch211-217k17.7	100	65.886	Stegastes_partitus
ENSGAFG00000005681	si:ch211-217k17.7	89	56.489	ENSTRUG00000024101	si:ch211-217k17.7	92	53.435	Takifugu_rubripes
ENSGAFG00000005681	si:ch211-217k17.7	67	50.242	ENSUAMG00000023428	CCDC86	54	50.242	Ursus_americanus
ENSGAFG00000005681	si:ch211-217k17.7	67	50.242	ENSUMAG00000011594	CCDC86	54	50.242	Ursus_maritimus
ENSGAFG00000005681	si:ch211-217k17.7	100	89.796	ENSXCOG00000011207	si:ch211-217k17.7	100	86.735	Xiphophorus_couchianus
ENSGAFG00000005681	si:ch211-217k17.7	100	90.476	ENSXMAG00000005529	si:ch211-217k17.7	100	90.476	Xiphophorus_maculatus