EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000006014 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4973 bases
Position: chrNHOQ01000074.1:503293-508265
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008857	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000008946	-	2201	-	ENSGAFP00000008857	269 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000006014	alyref	100	50.000	ENSGAFG00000007573	-	100	47.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006014	alyref	100	53.261	ENSAPOG00000000183	-	100	48.464	Acanthochromis_polyacanthus
ENSGAFG00000006014	alyref	100	48.161	ENSACIG00000020351	-	100	50.685	Amphilophus_citrinellus
ENSGAFG00000006014	alyref	99	78.755	ENSACIG00000006351	alyref	98	78.182	Amphilophus_citrinellus
ENSGAFG00000006014	alyref	100	79.710	ENSAOCG00000014012	alyref	100	84.783	Amphiprion_ocellaris
ENSGAFG00000006014	alyref	100	53.114	ENSAOCG00000019305	-	100	53.114	Amphiprion_ocellaris
ENSGAFG00000006014	alyref	100	79.710	ENSAPEG00000014603	alyref	100	84.783	Amphiprion_percula
ENSGAFG00000006014	alyref	100	54.212	ENSAPEG00000013527	-	100	53.114	Amphiprion_percula
ENSGAFG00000006014	alyref	100	55.401	ENSATEG00000000382	-	100	56.115	Anabas_testudineus
ENSGAFG00000006014	alyref	100	76.786	ENSATEG00000004307	alyref	100	79.286	Anabas_testudineus
ENSGAFG00000006014	alyref	100	76.173	ENSACLG00000008432	alyref	100	83.755	Astatotilapia_calliptera
ENSGAFG00000006014	alyref	100	53.169	ENSACLG00000010184	-	100	53.310	Astatotilapia_calliptera
ENSGAFG00000006014	alyref	100	70.714	ENSAMXG00000007359	alyref	100	75.000	Astyanax_mexicanus
ENSGAFG00000006014	alyref	99	45.848	ENSCING00000013568	-	99	44.170	Ciona_intestinalis
ENSGAFG00000006014	alyref	99	48.339	ENSCSAVG00000003324	-	99	45.956	Ciona_savignyi
ENSGAFG00000006014	alyref	100	77.617	ENSCSEG00000017800	alyref	100	81.227	Cynoglossus_semilaevis
ENSGAFG00000006014	alyref	100	82.784	ENSCVAG00000014869	alyref	100	85.714	Cyprinodon_variegatus
ENSGAFG00000006014	alyref	100	49.446	ENSCVAG00000007789	-	100	46.545	Cyprinodon_variegatus
ENSGAFG00000006014	alyref	100	77.143	ENSDARG00000077732	alyref	100	76.071	Danio_rerio
ENSGAFG00000006014	alyref	97	44.681	FBgn0010774	Ref1	65	50.276	Drosophila_melanogaster
ENSGAFG00000006014	alyref	70	47.668	ENSEBUG00000006305	alyref	100	39.785	Eptatretus_burgeri
ENSGAFG00000006014	alyref	99	53.184	ENSEBUG00000008253	alyref	95	51.292	Eptatretus_burgeri
ENSGAFG00000006014	alyref	100	76.557	ENSELUG00000017178	alyref	100	72.527	Esox_lucius
ENSGAFG00000006014	alyref	100	65.371	ENSELUG00000008849	-	100	64.664	Esox_lucius
ENSGAFG00000006014	alyref	57	75.949	ENSFALG00000011923	-	96	74.675	Ficedula_albicollis
ENSGAFG00000006014	alyref	100	48.339	ENSFHEG00000004698	-	100	48.352	Fundulus_heteroclitus
ENSGAFG00000006014	alyref	100	84.444	ENSFHEG00000019426	alyref	100	81.481	Fundulus_heteroclitus
ENSGAFG00000006014	alyref	100	70.803	ENSGMOG00000009882	alyref	100	67.518	Gadus_morhua
ENSGAFG00000006014	alyref	67	54.726	ENSGMOG00000013122	-	100	56.853	Gadus_morhua
ENSGAFG00000006014	alyref	100	55.245	ENSHBUG00000001454	-	100	53.448	Haplochromis_burtoni
ENSGAFG00000006014	alyref	100	76.173	ENSHBUG00000020196	alyref	100	83.755	Haplochromis_burtoni
ENSGAFG00000006014	alyref	98	46.643	ENSHCOG00000012825	-	94	47.619	Hippocampus_comes
ENSGAFG00000006014	alyref	100	74.275	ENSIPUG00000009469	alyref	100	75.000	Ictalurus_punctatus
ENSGAFG00000006014	alyref	72	66.837	ENSSTOG00000016570	-	92	66.667	Ictidomys_tridecemlineatus
ENSGAFG00000006014	alyref	100	52.747	ENSKMAG00000006462	-	100	51.648	Kryptolebias_marmoratus
ENSGAFG00000006014	alyref	100	78.261	ENSKMAG00000008912	alyref	100	80.072	Kryptolebias_marmoratus
ENSGAFG00000006014	alyref	99	46.739	ENSLBEG00000012930	-	99	48.746	Labrus_bergylta
ENSGAFG00000006014	alyref	100	81.818	ENSLBEG00000023118	alyref	90	84.727	Labrus_bergylta
ENSGAFG00000006014	alyref	100	47.603	ENSLBEG00000005387	-	100	48.299	Labrus_bergylta
ENSGAFG00000006014	alyref	76	70.370	ENSLOCG00000013879	alyref	89	67.907	Lepisosteus_oculatus
ENSGAFG00000006014	alyref	100	79.422	ENSMAMG00000003034	alyref	100	80.866	Mastacembelus_armatus
ENSGAFG00000006014	alyref	100	50.174	ENSMAMG00000005464	-	100	50.903	Mastacembelus_armatus
ENSGAFG00000006014	alyref	100	52.817	ENSMZEG00005012096	-	100	52.962	Maylandia_zebra
ENSGAFG00000006014	alyref	100	76.173	ENSMZEG00005008639	alyref	100	83.755	Maylandia_zebra
ENSGAFG00000006014	alyref	99	45.683	ENSMMOG00000007032	-	98	45.390	Mola_mola
ENSGAFG00000006014	alyref	99	85.185	ENSMMOG00000012458	alyref	97	83.150	Mola_mola
ENSGAFG00000006014	alyref	100	51.020	ENSMALG00000006054	-	100	48.980	Monopterus_albus
ENSGAFG00000006014	alyref	98	54.874	ENSMLUG00000028605	-	98	52.650	Myotis_lucifugus
ENSGAFG00000006014	alyref	98	55.000	ENSMLUG00000022467	-	98	51.613	Myotis_lucifugus
ENSGAFG00000006014	alyref	98	53.047	ENSMLUG00000009247	-	98	50.182	Myotis_lucifugus
ENSGAFG00000006014	alyref	100	56.631	ENSMLUG00000004098	-	100	54.839	Myotis_lucifugus
ENSGAFG00000006014	alyref	98	56.777	ENSMLUG00000022178	-	98	54.275	Myotis_lucifugus
ENSGAFG00000006014	alyref	98	56.727	ENSMLUG00000030671	-	99	52.465	Myotis_lucifugus
ENSGAFG00000006014	alyref	100	55.160	ENSMLUG00000006521	-	100	55.197	Myotis_lucifugus
ENSGAFG00000006014	alyref	100	54.861	ENSMLUG00000014372	-	100	55.556	Myotis_lucifugus
ENSGAFG00000006014	alyref	100	65.683	ENSNGAG00000022014	-	100	63.469	Nannospalax_galili
ENSGAFG00000006014	alyref	100	76.534	ENSNBRG00000001747	alyref	100	83.394	Neolamprologus_brichardi
ENSGAFG00000006014	alyref	100	53.901	ENSNBRG00000017460	-	100	54.035	Neolamprologus_brichardi
ENSGAFG00000006014	alyref	100	56.115	ENSONIG00000003296	-	100	56.184	Oreochromis_niloticus
ENSGAFG00000006014	alyref	100	78.571	ENSONIG00000019434	alyref	100	82.500	Oreochromis_niloticus
ENSGAFG00000006014	alyref	99	39.557	ENSORLG00000001620	-	60	46.460	Oryzias_latipes
ENSGAFG00000006014	alyref	100	82.721	ENSORLG00020011942	alyref	100	85.662	Oryzias_latipes_hni
ENSGAFG00000006014	alyref	100	49.638	ENSORLG00020015673	-	99	47.518	Oryzias_latipes_hni
ENSGAFG00000006014	alyref	100	85.294	ENSORLG00015022664	alyref	100	85.294	Oryzias_latipes_hsok
ENSGAFG00000006014	alyref	100	48.214	ENSORLG00015015143	-	99	48.582	Oryzias_latipes_hsok
ENSGAFG00000006014	alyref	100	83.026	ENSOMEG00000019176	alyref	100	87.823	Oryzias_melastigma
ENSGAFG00000006014	alyref	99	51.311	ENSOMEG00000007158	-	97	47.584	Oryzias_melastigma
ENSGAFG00000006014	alyref	68	75.676	ENSPPAG00000036403	-	68	73.514	Pan_paniscus
ENSGAFG00000006014	alyref	100	75.092	ENSPKIG00000007070	alyref	100	69.424	Paramormyrops_kingsleyae
ENSGAFG00000006014	alyref	99	73.260	ENSPKIG00000006233	-	81	67.153	Paramormyrops_kingsleyae
ENSGAFG00000006014	alyref	99	73.432	ENSPMGG00000016600	alyref	91	75.547	Periophthalmus_magnuspinnatus
ENSGAFG00000006014	alyref	74	47.739	ENSPMGG00000012994	-	70	57.258	Periophthalmus_magnuspinnatus
ENSGAFG00000006014	alyref	100	62.082	ENSPEMG00000016628	-	100	61.029	Peromyscus_maniculatus_bairdii
ENSGAFG00000006014	alyref	100	98.155	ENSPFOG00000022825	alyref	99	98.155	Poecilia_formosa
ENSGAFG00000006014	alyref	100	48.551	ENSPFOG00000017094	-	100	47.253	Poecilia_formosa
ENSGAFG00000006014	alyref	100	48.551	ENSPLAG00000014380	-	100	47.253	Poecilia_latipinna
ENSGAFG00000006014	alyref	100	98.519	ENSPLAG00000006948	alyref	100	98.519	Poecilia_latipinna
ENSGAFG00000006014	alyref	100	48.551	ENSPMEG00000023039	-	100	47.253	Poecilia_mexicana
ENSGAFG00000006014	alyref	100	98.155	ENSPMEG00000003547	alyref	100	98.155	Poecilia_mexicana
ENSGAFG00000006014	alyref	100	50.000	ENSPREG00000003649	-	100	48.339	Poecilia_reticulata
ENSGAFG00000006014	alyref	100	98.889	ENSPREG00000015795	alyref	100	98.889	Poecilia_reticulata
ENSGAFG00000006014	alyref	99	50.903	ENSPNYG00000002879	-	98	51.246	Pundamilia_nyererei
ENSGAFG00000006014	alyref	100	76.173	ENSPNYG00000017498	alyref	100	83.755	Pundamilia_nyererei
ENSGAFG00000006014	alyref	100	74.729	ENSPNAG00000002531	alyref	100	72.202	Pygocentrus_nattereri
ENSGAFG00000006014	alyref	71	73.846	ENSSBOG00000030924	-	87	72.165	Saimiri_boliviensis_boliviensis
ENSGAFG00000006014	alyref	99	54.745	ENSSHAG00000000609	-	99	51.264	Sarcophilus_harrisii
ENSGAFG00000006014	alyref	99	53.650	ENSSHAG00000012866	-	78	58.537	Sarcophilus_harrisii
ENSGAFG00000006014	alyref	68	76.630	ENSSFOG00015003678	alyref	83	73.913	Scleropages_formosus
ENSGAFG00000006014	alyref	76	79.227	ENSSFOG00015003923	alyref	73	78.365	Scleropages_formosus
ENSGAFG00000006014	alyref	100	50.877	ENSSMAG00000011169	-	100	54.187	Scophthalmus_maximus
ENSGAFG00000006014	alyref	100	76.364	ENSSMAG00000009283	alyref	100	80.364	Scophthalmus_maximus
ENSGAFG00000006014	alyref	100	79.348	ENSSDUG00000016158	alyref	100	83.696	Seriola_dumerili
ENSGAFG00000006014	alyref	100	79.061	ENSSLDG00000017803	alyref	100	83.394	Seriola_lalandi_dorsalis
ENSGAFG00000006014	alyref	99	53.285	ENSSPAG00000017028	-	96	52.920	Stegastes_partitus
ENSGAFG00000006014	alyref	100	49.477	ENSTRUG00000003051	-	100	47.552	Takifugu_rubripes
ENSGAFG00000006014	alyref	100	50.916	ENSTNIG00000014136	-	100	46.154	Tetraodon_nigroviridis
ENSGAFG00000006014	alyref	100	75.540	ENSTNIG00000011595	alyref	100	74.101	Tetraodon_nigroviridis
ENSGAFG00000006014	alyref	69	76.190	ENSVVUG00000000272	-	82	74.468	Vulpes_vulpes
ENSGAFG00000006014	alyref	100	97.770	ENSXCOG00000018047	alyref	99	97.770	Xiphophorus_couchianus
ENSGAFG00000006014	alyref	100	49.446	ENSXMAG00000018086	-	100	47.619	Xiphophorus_maculatus
ENSGAFG00000006014	alyref	100	98.141	ENSXMAG00000012218	alyref	99	98.141	Xiphophorus_maculatus