EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006034 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 9855 bases
Position: chrNHOQ01002850.1:3588970-3598824
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008916	PRP4	PF08799.11	2.6e-13	1	1
ENSGAFP00000008916	Prp18	PF02840.15	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009005	-	2856	-	ENSGAFP00000008916	341 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006034	prpf18	100	83.333	ENSG00000165630	PRPF18	100	83.333	Homo_sapiens
ENSGAFG00000006034	prpf18	100	92.962	ENSAPOG00000024177	prpf18	100	92.962	Acanthochromis_polyacanthus
ENSGAFG00000006034	prpf18	100	82.749	ENSAMEG00000013591	-	100	82.749	Ailuropoda_melanoleuca
ENSGAFG00000006034	prpf18	100	92.962	ENSACIG00000001186	prpf18	100	92.962	Amphilophus_citrinellus
ENSGAFG00000006034	prpf18	98	93.114	ENSAOCG00000006572	prpf18	94	90.643	Amphiprion_ocellaris
ENSGAFG00000006034	prpf18	100	93.255	ENSAPEG00000004564	prpf18	100	93.255	Amphiprion_percula
ENSGAFG00000006034	prpf18	100	92.962	ENSATEG00000000303	prpf18	100	92.962	Anabas_testudineus
ENSGAFG00000006034	prpf18	99	81.176	ENSAPLG00000003387	-	99	81.176	Anas_platyrhynchos
ENSGAFG00000006034	prpf18	100	83.430	ENSACAG00000000818	-	100	83.430	Anolis_carolinensis
ENSGAFG00000006034	prpf18	100	83.041	ENSANAG00000037445	-	100	83.041	Aotus_nancymaae
ENSGAFG00000006034	prpf18	100	92.082	ENSACLG00000026296	prpf18	100	92.082	Astatotilapia_calliptera
ENSGAFG00000006034	prpf18	100	87.429	ENSAMXG00000012848	prpf18	100	87.429	Astyanax_mexicanus
ENSGAFG00000006034	prpf18	100	82.456	ENSBTAG00000017244	PRPF18	100	82.456	Bos_taurus
ENSGAFG00000006034	prpf18	98	40.058	WBGene00009320	F32B6.3	97	40.058	Caenorhabditis_elegans
ENSGAFG00000006034	prpf18	100	83.041	ENSCJAG00000009432	-	100	83.041	Callithrix_jacchus
ENSGAFG00000006034	prpf18	100	82.749	ENSCAFG00000004735	-	100	82.749	Canis_familiaris
ENSGAFG00000006034	prpf18	100	82.749	ENSCAFG00020007712	-	100	82.749	Canis_lupus_dingo
ENSGAFG00000006034	prpf18	100	82.456	ENSCHIG00000000499	-	100	82.456	Capra_hircus
ENSGAFG00000006034	prpf18	100	83.041	ENSTSYG00000003517	-	100	83.041	Carlito_syrichta
ENSGAFG00000006034	prpf18	100	83.333	ENSCPOG00000021069	-	100	83.333	Cavia_porcellus
ENSGAFG00000006034	prpf18	100	83.041	ENSCCAG00000036822	-	100	83.041	Cebus_capucinus
ENSGAFG00000006034	prpf18	100	72.515	ENSCATG00000016633	-	100	72.515	Cercocebus_atys
ENSGAFG00000006034	prpf18	100	83.041	ENSCLAG00000011770	-	100	83.041	Chinchilla_lanigera
ENSGAFG00000006034	prpf18	100	81.197	ENSCSAG00000013109	-	100	81.197	Chlorocebus_sabaeus
ENSGAFG00000006034	prpf18	100	79.213	ENSCPBG00000003100	-	100	80.056	Chrysemys_picta_bellii
ENSGAFG00000006034	prpf18	99	56.851	ENSCING00000020481	-	97	56.851	Ciona_intestinalis
ENSGAFG00000006034	prpf18	99	55.718	ENSCSAVG00000010546	-	99	54.734	Ciona_savignyi
ENSGAFG00000006034	prpf18	100	83.333	ENSCANG00000034900	-	100	83.333	Colobus_angolensis_palliatus
ENSGAFG00000006034	prpf18	100	83.041	ENSCGRG00001023665	Prpf18	100	83.041	Cricetulus_griseus_chok1gshd
ENSGAFG00000006034	prpf18	100	83.041	ENSCGRG00000014690	Prpf18	100	83.041	Cricetulus_griseus_crigri
ENSGAFG00000006034	prpf18	100	89.150	ENSCSEG00000005536	prpf18	99	89.150	Cynoglossus_semilaevis
ENSGAFG00000006034	prpf18	100	95.308	ENSCVAG00000012401	prpf18	100	95.308	Cyprinodon_variegatus
ENSGAFG00000006034	prpf18	100	89.474	ENSDARG00000058306	prpf18	100	89.474	Danio_rerio
ENSGAFG00000006034	prpf18	100	82.749	ENSDNOG00000035607	-	100	82.749	Dasypus_novemcinctus
ENSGAFG00000006034	prpf18	100	82.456	ENSDORG00000000858	Prpf18	100	82.456	Dipodomys_ordii
ENSGAFG00000006034	prpf18	99	51.775	FBgn0027784	Prp18	98	51.775	Drosophila_melanogaster
ENSGAFG00000006034	prpf18	100	75.439	ENSETEG00000015060	-	100	75.439	Echinops_telfairi
ENSGAFG00000006034	prpf18	100	69.164	ENSEBUG00000016502	prpf18	99	68.208	Eptatretus_burgeri
ENSGAFG00000006034	prpf18	100	83.041	ENSEASG00005019373	-	100	83.041	Equus_asinus_asinus
ENSGAFG00000006034	prpf18	100	83.041	ENSECAG00000006997	PRPF18	100	83.041	Equus_caballus
ENSGAFG00000006034	prpf18	73	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSGAFG00000006034	prpf18	100	87.464	ENSELUG00000022190	prpf18	100	87.464	Esox_lucius
ENSGAFG00000006034	prpf18	100	82.749	ENSFCAG00000004436	-	100	82.749	Felis_catus
ENSGAFG00000006034	prpf18	92	78.769	ENSFALG00000001912	-	97	79.077	Ficedula_albicollis
ENSGAFG00000006034	prpf18	99	56.232	ENSFDAG00000010713	-	97	56.232	Fukomys_damarensis
ENSGAFG00000006034	prpf18	94	85.000	ENSFDAG00000014026	-	100	85.000	Fukomys_damarensis
ENSGAFG00000006034	prpf18	80	98.168	ENSFHEG00000020125	prpf18	100	98.168	Fundulus_heteroclitus
ENSGAFG00000006034	prpf18	99	86.471	ENSGMOG00000012210	prpf18	99	86.471	Gadus_morhua
ENSGAFG00000006034	prpf18	100	82.164	ENSGALG00000043593	-	100	82.164	Gallus_gallus
ENSGAFG00000006034	prpf18	100	89.443	ENSGACG00000012232	prpf18	100	89.443	Gasterosteus_aculeatus
ENSGAFG00000006034	prpf18	100	83.041	ENSGAGG00000016878	-	100	83.041	Gopherus_agassizii
ENSGAFG00000006034	prpf18	92	82.595	ENSGGOG00000025188	-	96	82.595	Gorilla_gorilla
ENSGAFG00000006034	prpf18	100	92.082	ENSHBUG00000010264	prpf18	100	92.082	Haplochromis_burtoni
ENSGAFG00000006034	prpf18	100	82.749	ENSHGLG00000018534	PRPF18	100	82.749	Heterocephalus_glaber_female
ENSGAFG00000006034	prpf18	94	84.688	ENSHGLG00100012161	-	98	84.688	Heterocephalus_glaber_male
ENSGAFG00000006034	prpf18	100	93.548	ENSHCOG00000015987	prpf18	100	93.548	Hippocampus_comes
ENSGAFG00000006034	prpf18	100	81.870	ENSIPUG00000007432	prpf18	100	82.436	Ictalurus_punctatus
ENSGAFG00000006034	prpf18	100	83.041	ENSSTOG00000008735	-	100	83.041	Ictidomys_tridecemlineatus
ENSGAFG00000006034	prpf18	100	60.933	ENSJJAG00000015191	-	100	60.933	Jaculus_jaculus
ENSGAFG00000006034	prpf18	100	83.333	ENSJJAG00000024041	-	100	83.333	Jaculus_jaculus
ENSGAFG00000006034	prpf18	100	94.135	ENSKMAG00000012124	prpf18	100	94.135	Kryptolebias_marmoratus
ENSGAFG00000006034	prpf18	98	88.690	ENSLBEG00000028466	prpf18	99	88.690	Labrus_bergylta
ENSGAFG00000006034	prpf18	100	82.749	ENSLACG00000009885	prpf18	100	83.333	Latimeria_chalumnae
ENSGAFG00000006034	prpf18	100	87.427	ENSLOCG00000016736	prpf18	100	87.427	Lepisosteus_oculatus
ENSGAFG00000006034	prpf18	100	83.333	ENSLAFG00000007753	-	100	83.333	Loxodonta_africana
ENSGAFG00000006034	prpf18	100	83.333	ENSMFAG00000000540	-	100	83.333	Macaca_fascicularis
ENSGAFG00000006034	prpf18	100	83.333	ENSMMUG00000015071	PRPF18	100	83.333	Macaca_mulatta
ENSGAFG00000006034	prpf18	100	83.333	ENSMNEG00000024679	-	100	83.333	Macaca_nemestrina
ENSGAFG00000006034	prpf18	100	68.129	ENSMLEG00000031715	-	100	68.129	Mandrillus_leucophaeus
ENSGAFG00000006034	prpf18	100	91.789	ENSMAMG00000006610	prpf18	100	91.789	Mastacembelus_armatus
ENSGAFG00000006034	prpf18	100	92.082	ENSMZEG00005019392	prpf18	100	92.082	Maylandia_zebra
ENSGAFG00000006034	prpf18	100	82.164	ENSMGAG00000005023	-	100	82.164	Meleagris_gallopavo
ENSGAFG00000006034	prpf18	100	83.626	ENSMICG00000006572	-	100	83.626	Microcebus_murinus
ENSGAFG00000006034	prpf18	100	83.333	ENSMOCG00000021468	Prpf18	100	83.333	Microtus_ochrogaster
ENSGAFG00000006034	prpf18	100	92.962	ENSMMOG00000013012	prpf18	100	92.962	Mola_mola
ENSGAFG00000006034	prpf18	100	75.731	ENSMODG00000024043	-	100	75.731	Monodelphis_domestica
ENSGAFG00000006034	prpf18	96	77.811	ENSMODG00000016902	-	92	77.811	Monodelphis_domestica
ENSGAFG00000006034	prpf18	100	84.241	ENSMALG00000005486	prpf18	100	84.726	Monopterus_albus
ENSGAFG00000006034	prpf18	100	82.749	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSGAFG00000006034	prpf18	100	83.041	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSGAFG00000006034	prpf18	100	83.041	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSGAFG00000006034	prpf18	100	83.041	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSGAFG00000006034	prpf18	100	82.456	ENSMPUG00000000938	-	100	82.456	Mustela_putorius_furo
ENSGAFG00000006034	prpf18	100	82.456	ENSMLUG00000009200	-	100	82.456	Myotis_lucifugus
ENSGAFG00000006034	prpf18	68	81.034	ENSNGAG00000023550	-	83	81.034	Nannospalax_galili
ENSGAFG00000006034	prpf18	100	83.333	ENSNGAG00000012500	-	100	83.333	Nannospalax_galili
ENSGAFG00000006034	prpf18	100	92.375	ENSNBRG00000001778	prpf18	100	92.375	Neolamprologus_brichardi
ENSGAFG00000006034	prpf18	100	83.333	ENSNLEG00000012186	-	100	83.333	Nomascus_leucogenys
ENSGAFG00000006034	prpf18	76	71.815	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSGAFG00000006034	prpf18	77	63.774	ENSOPRG00000002153	-	100	63.774	Ochotona_princeps
ENSGAFG00000006034	prpf18	100	82.456	ENSODEG00000003770	-	100	82.456	Octodon_degus
ENSGAFG00000006034	prpf18	98	92.216	ENSONIG00000014854	prpf18	96	92.216	Oreochromis_niloticus
ENSGAFG00000006034	prpf18	100	84.211	ENSOANG00000015404	-	100	84.211	Ornithorhynchus_anatinus
ENSGAFG00000006034	prpf18	100	83.041	ENSOCUG00000027756	-	96	83.792	Oryctolagus_cuniculus
ENSGAFG00000006034	prpf18	100	88.286	ENSORLG00000010293	prpf18	100	88.286	Oryzias_latipes
ENSGAFG00000006034	prpf18	100	90.616	ENSORLG00020001530	prpf18	100	90.616	Oryzias_latipes_hni
ENSGAFG00000006034	prpf18	100	90.323	ENSORLG00015013705	prpf18	100	90.323	Oryzias_latipes_hsok
ENSGAFG00000006034	prpf18	100	91.496	ENSOMEG00000009167	prpf18	100	91.496	Oryzias_melastigma
ENSGAFG00000006034	prpf18	100	82.456	ENSOGAG00000007294	-	100	82.456	Otolemur_garnettii
ENSGAFG00000006034	prpf18	100	80.342	ENSOARG00000006243	-	100	80.342	Ovis_aries
ENSGAFG00000006034	prpf18	100	83.333	ENSPPAG00000041959	-	100	83.333	Pan_paniscus
ENSGAFG00000006034	prpf18	100	82.749	ENSPPRG00000000107	-	100	82.749	Panthera_pardus
ENSGAFG00000006034	prpf18	100	82.749	ENSPTIG00000021094	-	100	82.749	Panthera_tigris_altaica
ENSGAFG00000006034	prpf18	100	83.333	ENSPTRG00000002306	PRPF18	100	83.333	Pan_troglodytes
ENSGAFG00000006034	prpf18	100	83.041	ENSPANG00000023346	-	100	83.041	Papio_anubis
ENSGAFG00000006034	prpf18	86	100.000	ENSPKIG00000014128	prpf18	96	85.755	Paramormyrops_kingsleyae
ENSGAFG00000006034	prpf18	100	82.749	ENSPSIG00000016064	-	100	82.749	Pelodiscus_sinensis
ENSGAFG00000006034	prpf18	100	83.918	ENSPMGG00000016486	prpf18	100	83.918	Periophthalmus_magnuspinnatus
ENSGAFG00000006034	prpf18	100	83.041	ENSPEMG00000013704	Prpf18	100	83.041	Peromyscus_maniculatus_bairdii
ENSGAFG00000006034	prpf18	100	73.199	ENSPMAG00000000204	prpf18	100	73.199	Petromyzon_marinus
ENSGAFG00000006034	prpf18	92	82.595	ENSPCIG00000012963	-	99	82.595	Phascolarctos_cinereus
ENSGAFG00000006034	prpf18	100	94.286	ENSPFOG00000017611	prpf18	100	94.286	Poecilia_formosa
ENSGAFG00000006034	prpf18	100	96.774	ENSPLAG00000000369	prpf18	100	96.774	Poecilia_latipinna
ENSGAFG00000006034	prpf18	100	97.067	ENSPMEG00000005183	prpf18	100	97.067	Poecilia_mexicana
ENSGAFG00000006034	prpf18	100	96.774	ENSPREG00000015232	prpf18	100	96.774	Poecilia_reticulata
ENSGAFG00000006034	prpf18	100	83.041	ENSPPYG00000002101	PRPF18	100	83.041	Pongo_abelii
ENSGAFG00000006034	prpf18	100	65.497	ENSPCAG00000010833	-	100	65.497	Procavia_capensis
ENSGAFG00000006034	prpf18	100	78.886	ENSPCOG00000013057	-	100	78.886	Propithecus_coquereli
ENSGAFG00000006034	prpf18	100	49.708	ENSPVAG00000002947	-	100	49.708	Pteropus_vampyrus
ENSGAFG00000006034	prpf18	100	91.789	ENSPNYG00000003554	prpf18	100	91.789	Pundamilia_nyererei
ENSGAFG00000006034	prpf18	100	85.755	ENSPNAG00000023151	prpf18	100	85.755	Pygocentrus_nattereri
ENSGAFG00000006034	prpf18	100	83.041	ENSRNOG00000018396	Prpf18	100	83.041	Rattus_norvegicus
ENSGAFG00000006034	prpf18	100	83.626	ENSRBIG00000028028	-	100	83.626	Rhinopithecus_bieti
ENSGAFG00000006034	prpf18	100	83.333	ENSRROG00000040695	-	100	83.333	Rhinopithecus_roxellana
ENSGAFG00000006034	prpf18	100	83.041	ENSSBOG00000034482	-	100	83.041	Saimiri_boliviensis_boliviensis
ENSGAFG00000006034	prpf18	100	83.626	ENSSHAG00000016463	-	100	83.626	Sarcophilus_harrisii
ENSGAFG00000006034	prpf18	100	69.883	ENSSHAG00000009669	-	100	69.883	Sarcophilus_harrisii
ENSGAFG00000006034	prpf18	98	84.348	ENSSFOG00015022118	prpf18	100	79.827	Scleropages_formosus
ENSGAFG00000006034	prpf18	77	44.318	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSGAFG00000006034	prpf18	100	90.616	ENSSMAG00000005308	prpf18	100	90.616	Scophthalmus_maximus
ENSGAFG00000006034	prpf18	100	93.255	ENSSDUG00000015428	prpf18	100	93.255	Seriola_dumerili
ENSGAFG00000006034	prpf18	100	92.962	ENSSLDG00000023989	prpf18	100	92.962	Seriola_lalandi_dorsalis
ENSGAFG00000006034	prpf18	100	54.678	ENSSARG00000005307	-	100	54.678	Sorex_araneus
ENSGAFG00000006034	prpf18	100	83.333	ENSSPUG00000002619	-	100	83.333	Sphenodon_punctatus
ENSGAFG00000006034	prpf18	100	93.255	ENSSPAG00000019502	prpf18	100	93.255	Stegastes_partitus
ENSGAFG00000006034	prpf18	100	82.749	ENSSSCG00000026354	-	100	82.749	Sus_scrofa
ENSGAFG00000006034	prpf18	100	82.164	ENSTGUG00000002286	-	100	82.164	Taeniopygia_guttata
ENSGAFG00000006034	prpf18	100	90.029	ENSTRUG00000011278	prpf18	100	90.029	Takifugu_rubripes
ENSGAFG00000006034	prpf18	100	90.029	ENSTNIG00000000911	prpf18	100	90.029	Tetraodon_nigroviridis
ENSGAFG00000006034	prpf18	79	97.436	ENSTBEG00000013011	-	79	97.436	Tupaia_belangeri
ENSGAFG00000006034	prpf18	100	83.333	ENSTTRG00000011117	PRPF18	100	83.333	Tursiops_truncatus
ENSGAFG00000006034	prpf18	91	85.531	ENSUAMG00000001815	-	93	85.531	Ursus_americanus
ENSGAFG00000006034	prpf18	100	78.070	ENSUMAG00000012329	-	100	78.070	Ursus_maritimus
ENSGAFG00000006034	prpf18	100	77.193	ENSVPAG00000011486	-	100	77.193	Vicugna_pacos
ENSGAFG00000006034	prpf18	100	82.749	ENSVVUG00000005453	-	100	82.749	Vulpes_vulpes
ENSGAFG00000006034	prpf18	100	75.652	ENSXETG00000024057	prpf18	100	75.362	Xenopus_tropicalis
ENSGAFG00000006034	prpf18	100	97.085	ENSXCOG00000020414	prpf18	100	97.085	Xiphophorus_couchianus
ENSGAFG00000006034	prpf18	100	97.947	ENSXMAG00000004713	prpf18	91	97.947	Xiphophorus_maculatus