EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006087 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8534 bases
Position: chrNHOQ01002060.1:63605-72138
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000008952	MMR_HSR1	PF01926.23	2.8e-09	1	1
ENSGAFP00000008965	MMR_HSR1	PF01926.23	2.8e-09	1	1
ENSGAFP00000008971	MMR_HSR1	PF01926.23	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009054	-	4251	-	ENSGAFP00000008965	799 (aa)	-	-
ENSGAFT00000009060	-	4319	-	ENSGAFP00000008971	799 (aa)	-	-
ENSGAFT00000009041	-	4262	-	ENSGAFP00000008952	799 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006087	-	68	56.410	ENSAPOG00000000444	-	91	56.593	Acanthochromis_polyacanthus
ENSGAFG00000006087	-	98	65.641	ENSATEG00000011040	-	79	54.211	Anabas_testudineus
ENSGAFG00000006087	-	57	56.140	ENSACLG00000001800	-	99	55.921	Astatotilapia_calliptera
ENSGAFG00000006087	-	98	56.329	ENSACLG00000001833	-	98	56.274	Astatotilapia_calliptera
ENSGAFG00000006087	-	67	54.104	ENSACLG00000001777	-	99	54.664	Astatotilapia_calliptera
ENSGAFG00000006087	-	99	68.696	ENSCVAG00000003284	-	80	68.944	Cyprinodon_variegatus
ENSGAFG00000006087	-	71	70.506	ENSFHEG00000010614	-	78	68.227	Fundulus_heteroclitus
ENSGAFG00000006087	-	73	66.498	ENSFHEG00000010603	-	77	66.667	Fundulus_heteroclitus
ENSGAFG00000006087	-	75	56.572	ENSHBUG00000015375	-	98	57.985	Haplochromis_burtoni
ENSGAFG00000006087	-	99	54.397	ENSHBUG00000018072	-	88	54.271	Haplochromis_burtoni
ENSGAFG00000006087	-	75	60.661	ENSKMAG00000011735	-	76	60.556	Kryptolebias_marmoratus
ENSGAFG00000006087	-	98	55.767	ENSLBEG00000015796	-	83	55.102	Labrus_bergylta
ENSGAFG00000006087	-	83	50.373	ENSMAMG00000013245	-	57	49.925	Mastacembelus_armatus
ENSGAFG00000006087	-	69	55.596	ENSMZEG00005020584	-	99	55.596	Maylandia_zebra
ENSGAFG00000006087	-	56	58.222	ENSNBRG00000005577	-	98	57.778	Neolamprologus_brichardi
ENSGAFG00000006087	-	54	55.227	ENSORLG00020017362	-	64	54.967	Oryzias_latipes_hni
ENSGAFG00000006087	-	56	50.749	ENSOMEG00000018412	-	67	51.178	Oryzias_melastigma
ENSGAFG00000006087	-	69	53.777	ENSOMEG00000018335	-	77	49.920	Oryzias_melastigma
ENSGAFG00000006087	-	50	71.562	ENSPLAG00000023243	-	96	71.562	Poecilia_latipinna
ENSGAFG00000006087	-	67	83.829	ENSPLAG00000023261	-	100	83.829	Poecilia_latipinna
ENSGAFG00000006087	-	100	84.913	ENSPMEG00000009099	-	100	84.913	Poecilia_mexicana
ENSGAFG00000006087	-	76	80.328	ENSPMEG00000009067	-	77	79.935	Poecilia_mexicana
ENSGAFG00000006087	-	76	78.956	ENSPREG00000006740	-	81	78.956	Poecilia_reticulata
ENSGAFG00000006087	-	97	50.515	ENSSMAG00000003569	-	60	50.515	Scophthalmus_maximus
ENSGAFG00000006087	-	97	55.939	ENSSDUG00000001451	-	64	55.256	Seriola_dumerili
ENSGAFG00000006087	-	100	88.110	ENSXMAG00000028779	-	81	88.110	Xiphophorus_maculatus