EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000006126 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4460 bases
Position: chrNHOQ01002060.1:79416-83875
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009016	MMR_HSR1	PF01926.23	5.7e-09	1	1
ENSGAFP00000009019	MMR_HSR1	PF01926.23	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009109	-	3548	-	ENSGAFP00000009019	556 (aa)	-	-
ENSGAFT00000009106	-	3532	-	ENSGAFP00000009016	556 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000006126	-	50	32.178	ENSGAFG00000015917	-	61	32.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006126	-	63	39.726	ENSATEG00000010935	-	59	38.551	Anabas_testudineus
ENSGAFG00000006126	-	64	49.735	ENSKMAG00000014074	-	69	49.096	Kryptolebias_marmoratus
ENSGAFG00000006126	-	57	52.648	ENSKMAG00000014089	-	69	56.475	Kryptolebias_marmoratus
ENSGAFG00000006126	-	66	39.691	ENSMAMG00000013278	-	56	42.547	Mastacembelus_armatus
ENSGAFG00000006126	-	53	45.973	ENSMZEG00005020552	-	60	45.973	Maylandia_zebra
ENSGAFG00000006126	-	68	73.385	ENSPFOG00000003348	-	91	77.871	Poecilia_formosa
ENSGAFG00000006126	-	79	75.724	ENSPMEG00000008997	-	70	74.783	Poecilia_mexicana
ENSGAFG00000006126	-	85	72.597	ENSPREG00000008177	-	77	72.581	Poecilia_reticulata
ENSGAFG00000006126	-	81	38.008	ENSSDUG00000001398	-	73	38.877	Seriola_dumerili
ENSGAFG00000006126	-	52	35.370	ENSSLDG00000001762	-	73	35.922	Seriola_lalandi_dorsalis
ENSGAFG00000006126	-	50	43.571	ENSSPAG00000015913	-	92	43.571	Stegastes_partitus
ENSGAFG00000006126	-	53	39.919	ENSSPAG00000015878	-	85	39.919	Stegastes_partitus
ENSGAFG00000006126	-	86	78.675	ENSXMAG00000024901	-	79	78.675	Xiphophorus_maculatus