EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006272 (Gene tree)
Gene ID: -
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 52663 bases
Position: chrNHOQ01001156.1:4451203-4503865
Accession: ZDB-GENE-040426-931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009223	DRY_EERY	PF09750.9	4.1e-32	1	1
ENSGAFP00000009212	DRY_EERY	PF09750.9	4.3e-32	1	1
ENSGAFP00000009223	Surp	PF01805.20	8.4e-29	1	2
ENSGAFP00000009223	Surp	PF01805.20	8.4e-29	2	2
ENSGAFP00000009212	Surp	PF01805.20	8.8e-29	1	2
ENSGAFP00000009212	Surp	PF01805.20	8.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009306	-	3660	-	ENSGAFP00000009212	928 (aa)	-	-
ENSGAFT00000009318	-	3849	-	ENSGAFP00000009223	908 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006272	sfswap	89	67.751	ENSG00000061936	SFSWAP	67	79.012	Homo_sapiens
ENSGAFG00000006272	sfswap	94	95.652	ENSAPOG00000005784	sfswap	93	95.652	Acanthochromis_polyacanthus
ENSGAFG00000006272	sfswap	97	53.347	ENSAMEG00000013818	SFSWAP	82	59.358	Ailuropoda_melanoleuca
ENSGAFG00000006272	sfswap	79	81.466	ENSAOCG00000016469	sfswap	77	81.114	Amphiprion_ocellaris
ENSGAFG00000006272	sfswap	79	81.328	ENSAPEG00000004965	sfswap	77	80.978	Amphiprion_percula
ENSGAFG00000006272	sfswap	81	79.082	ENSATEG00000021053	sfswap	98	73.817	Anabas_testudineus
ENSGAFG00000006272	sfswap	94	50.313	ENSACAG00000007220	SFSWAP	72	58.735	Anolis_carolinensis
ENSGAFG00000006272	sfswap	97	53.990	ENSANAG00000001518	SFSWAP	84	58.333	Aotus_nancymaae
ENSGAFG00000006272	sfswap	81	78.919	ENSACLG00000020159	sfswap	81	79.296	Astatotilapia_calliptera
ENSGAFG00000006272	sfswap	74	65.881	ENSAMXG00000008657	sfswap	99	61.145	Astyanax_mexicanus
ENSGAFG00000006272	sfswap	97	53.830	ENSBTAG00000000439	SFSWAP	83	59.669	Bos_taurus
ENSGAFG00000006272	sfswap	97	53.320	ENSCJAG00000003613	SFSWAP	78	58.960	Callithrix_jacchus
ENSGAFG00000006272	sfswap	97	54.825	ENSCAFG00000006625	SFSWAP	83	59.720	Canis_familiaris
ENSGAFG00000006272	sfswap	87	50.059	ENSCAFG00020011254	SFSWAP	71	54.452	Canis_lupus_dingo
ENSGAFG00000006272	sfswap	97	53.990	ENSCHIG00000008838	SFSWAP	83	59.613	Capra_hircus
ENSGAFG00000006272	sfswap	89	67.655	ENSCCAG00000037255	SFSWAP	80	60.172	Cebus_capucinus
ENSGAFG00000006272	sfswap	89	67.568	ENSCATG00000031094	SFSWAP	99	50.508	Cercocebus_atys
ENSGAFG00000006272	sfswap	51	50.096	ENSCLAG00000008380	SFSWAP	74	57.799	Chinchilla_lanigera
ENSGAFG00000006272	sfswap	75	66.667	ENSCHOG00000003578	SFSWAP	82	60.317	Choloepus_hoffmanni
ENSGAFG00000006272	sfswap	97	54.555	ENSCPBG00000024757	SFSWAP	78	60.142	Chrysemys_picta_bellii
ENSGAFG00000006272	sfswap	89	67.480	ENSCANG00000036501	SFSWAP	99	50.711	Colobus_angolensis_palliatus
ENSGAFG00000006272	sfswap	92	63.342	ENSCGRG00001011284	Sfswap	99	50.859	Cricetulus_griseus_chok1gshd
ENSGAFG00000006272	sfswap	92	62.935	ENSCGRG00000017417	Sfswap	99	50.859	Cricetulus_griseus_crigri
ENSGAFG00000006272	sfswap	80	73.585	ENSCSEG00000003773	sfswap	77	73.720	Cynoglossus_semilaevis
ENSGAFG00000006272	sfswap	74	69.132	ENSDARG00000005980	sfswap	99	62.641	Danio_rerio
ENSGAFG00000006272	sfswap	51	47.170	ENSDNOG00000018742	SFSWAP	82	59.860	Dasypus_novemcinctus
ENSGAFG00000006272	sfswap	97	48.237	ENSDORG00000010352	Sfswap	76	51.573	Dipodomys_ordii
ENSGAFG00000006272	sfswap	50	48.276	FBgn0003638	su(w[a])	56	57.303	Drosophila_melanogaster
ENSGAFG00000006272	sfswap	62	100.000	ENSETEG00000016657	-	60	100.000	Echinops_telfairi
ENSGAFG00000006272	sfswap	73	36.421	ENSEBUG00000016748	SFSWAP	72	38.416	Eptatretus_burgeri
ENSGAFG00000006272	sfswap	97	53.099	ENSEASG00005016502	SFSWAP	83	59.889	Equus_asinus_asinus
ENSGAFG00000006272	sfswap	97	52.626	ENSECAG00000007657	SFSWAP	83	59.889	Equus_caballus
ENSGAFG00000006272	sfswap	82	49.596	ENSEEUG00000001713	SFSWAP	64	62.791	Erinaceus_europaeus
ENSGAFG00000006272	sfswap	100	58.491	ENSELUG00000010942	sfswap	94	62.407	Esox_lucius
ENSGAFG00000006272	sfswap	97	54.184	ENSFCAG00000010778	SFSWAP	70	62.319	Felis_catus
ENSGAFG00000006272	sfswap	70	59.397	ENSFALG00000009577	SFSWAP	75	58.543	Ficedula_albicollis
ENSGAFG00000006272	sfswap	52	82.877	ENSGMOG00000009205	sfswap	52	82.877	Gadus_morhua
ENSGAFG00000006272	sfswap	50	47.969	ENSGALG00000002487	SFSWAP	82	59.379	Gallus_gallus
ENSGAFG00000006272	sfswap	97	57.068	ENSGACG00000017647	sfswap	92	66.859	Gasterosteus_aculeatus
ENSGAFG00000006272	sfswap	97	54.676	ENSGAGG00000002611	SFSWAP	81	59.607	Gopherus_agassizii
ENSGAFG00000006272	sfswap	89	67.568	ENSGGOG00000014877	SFSWAP	99	50.810	Gorilla_gorilla
ENSGAFG00000006272	sfswap	89	68.194	ENSHGLG00000019216	SFSWAP	75	58.904	Heterocephalus_glaber_female
ENSGAFG00000006272	sfswap	92	64.109	ENSHGLG00100019350	SFSWAP	75	58.767	Heterocephalus_glaber_male
ENSGAFG00000006272	sfswap	78	74.791	ENSHCOG00000009475	sfswap	100	68.482	Hippocampus_comes
ENSGAFG00000006272	sfswap	73	68.110	ENSIPUG00000010598	sfswap	99	59.574	Ictalurus_punctatus
ENSGAFG00000006272	sfswap	90	68.338	ENSSTOG00000000773	SFSWAP	99	51.371	Ictidomys_tridecemlineatus
ENSGAFG00000006272	sfswap	97	54.124	ENSJJAG00000006609	Sfswap	97	51.194	Jaculus_jaculus
ENSGAFG00000006272	sfswap	79	81.843	ENSKMAG00000013168	sfswap	77	81.941	Kryptolebias_marmoratus
ENSGAFG00000006272	sfswap	77	78.805	ENSLBEG00000010239	sfswap	78	77.952	Labrus_bergylta
ENSGAFG00000006272	sfswap	72	58.865	ENSLACG00000018678	SFSWAP	71	56.960	Latimeria_chalumnae
ENSGAFG00000006272	sfswap	100	56.413	ENSLOCG00000006202	sfswap	72	64.557	Lepisosteus_oculatus
ENSGAFG00000006272	sfswap	51	51.111	ENSLAFG00000014462	SFSWAP	77	58.032	Loxodonta_africana
ENSGAFG00000006272	sfswap	100	52.911	ENSMFAG00000037352	SFSWAP	87	57.255	Macaca_fascicularis
ENSGAFG00000006272	sfswap	97	54.829	ENSMMUG00000020343	SFSWAP	99	50.761	Macaca_mulatta
ENSGAFG00000006272	sfswap	97	54.829	ENSMNEG00000041002	SFSWAP	99	50.761	Macaca_nemestrina
ENSGAFG00000006272	sfswap	90	64.850	ENSMLEG00000035728	SFSWAP	99	49.643	Mandrillus_leucophaeus
ENSGAFG00000006272	sfswap	100	76.533	ENSMAMG00000006631	sfswap	100	76.452	Mastacembelus_armatus
ENSGAFG00000006272	sfswap	81	78.919	ENSMZEG00005017834	SFSWAP	77	79.296	Maylandia_zebra
ENSGAFG00000006272	sfswap	89	67.480	ENSMICG00000004465	SFSWAP	99	51.527	Microcebus_murinus
ENSGAFG00000006272	sfswap	92	63.682	ENSMOCG00000014390	Sfswap	99	50.963	Microtus_ochrogaster
ENSGAFG00000006272	sfswap	85	62.385	ENSMODG00000015581	SFSWAP	67	53.546	Monodelphis_domestica
ENSGAFG00000006272	sfswap	79	76.860	ENSMALG00000012603	sfswap	96	72.390	Monopterus_albus
ENSGAFG00000006272	sfswap	89	67.480	MGP_CAROLIEiJ_G0027780	Sfswap	67	77.778	Mus_caroli
ENSGAFG00000006272	sfswap	89	68.022	ENSMUSG00000029439	Sfswap	67	77.778	Mus_musculus
ENSGAFG00000006272	sfswap	92	63.433	MGP_PahariEiJ_G0024360	Sfswap	94	60.526	Mus_pahari
ENSGAFG00000006272	sfswap	89	68.022	MGP_SPRETEiJ_G0028779	Sfswap	67	77.778	Mus_spretus
ENSGAFG00000006272	sfswap	97	54.789	ENSMPUG00000002218	SFSWAP	74	59.916	Mustela_putorius_furo
ENSGAFG00000006272	sfswap	73	57.851	ENSMLUG00000011296	SFSWAP	77	59.889	Myotis_lucifugus
ENSGAFG00000006272	sfswap	100	51.779	ENSNGAG00000018167	Sfswap	79	55.669	Nannospalax_galili
ENSGAFG00000006272	sfswap	73	78.111	ENSNBRG00000020857	sfswap	75	78.056	Neolamprologus_brichardi
ENSGAFG00000006272	sfswap	92	60.902	ENSNLEG00000008386	SFSWAP	76	58.470	Nomascus_leucogenys
ENSGAFG00000006272	sfswap	62	63.488	ENSOPRG00000006983	-	75	65.000	Ochotona_princeps
ENSGAFG00000006272	sfswap	85	73.813	ENSONIG00000003757	sfswap	89	70.972	Oreochromis_niloticus
ENSGAFG00000006272	sfswap	65	63.180	ENSOCUG00000002165	SFSWAP	74	58.750	Oryctolagus_cuniculus
ENSGAFG00000006272	sfswap	79	77.473	ENSORLG00000010983	sfswap	100	75.370	Oryzias_latipes
ENSGAFG00000006272	sfswap	79	77.473	ENSORLG00020010779	sfswap	100	75.105	Oryzias_latipes_hni
ENSGAFG00000006272	sfswap	79	77.915	ENSORLG00015023093	sfswap	100	75.767	Oryzias_latipes_hsok
ENSGAFG00000006272	sfswap	79	77.886	ENSOMEG00000022065	sfswap	100	75.239	Oryzias_melastigma
ENSGAFG00000006272	sfswap	84	58.402	ENSOARG00000014314	SFSWAP	96	52.201	Ovis_aries
ENSGAFG00000006272	sfswap	90	67.568	ENSPPAG00000036706	SFSWAP	96	51.623	Pan_paniscus
ENSGAFG00000006272	sfswap	97	51.619	ENSPPRG00000017318	SFSWAP	80	61.538	Panthera_pardus
ENSGAFG00000006272	sfswap	89	67.308	ENSPTIG00000004304	SFSWAP	68	68.044	Panthera_tigris_altaica
ENSGAFG00000006272	sfswap	90	67.568	ENSPTRG00000005640	SFSWAP	96	51.623	Pan_troglodytes
ENSGAFG00000006272	sfswap	89	67.568	ENSPANG00000019737	SFSWAP	99	50.508	Papio_anubis
ENSGAFG00000006272	sfswap	74	64.807	ENSPKIG00000008327	sfswap	74	64.648	Paramormyrops_kingsleyae
ENSGAFG00000006272	sfswap	92	63.433	ENSPEMG00000001237	Sfswap	99	49.698	Peromyscus_maniculatus_bairdii
ENSGAFG00000006272	sfswap	50	52.903	ENSPMAG00000008279	sfswap	99	53.219	Petromyzon_marinus
ENSGAFG00000006272	sfswap	85	69.486	ENSPCIG00000006062	SFSWAP	77	58.419	Phascolarctos_cinereus
ENSGAFG00000006272	sfswap	100	95.815	ENSPFOG00000019657	sfswap	100	95.815	Poecilia_formosa
ENSGAFG00000006272	sfswap	100	95.923	ENSPLAG00000008513	sfswap	100	95.923	Poecilia_latipinna
ENSGAFG00000006272	sfswap	100	95.699	ENSPMEG00000008716	sfswap	100	95.914	Poecilia_mexicana
ENSGAFG00000006272	sfswap	100	95.601	ENSPREG00000006692	sfswap	100	95.601	Poecilia_reticulata
ENSGAFG00000006272	sfswap	89	67.838	ENSPPYG00000005129	SFSWAP	80	56.863	Pongo_abelii
ENSGAFG00000006272	sfswap	53	62.097	ENSPCAG00000004977	-	57	61.771	Procavia_capensis
ENSGAFG00000006272	sfswap	89	67.480	ENSPCOG00000023786	SFSWAP	99	50.254	Propithecus_coquereli
ENSGAFG00000006272	sfswap	74	65.132	ENSPNAG00000007073	sfswap	99	61.735	Pygocentrus_nattereri
ENSGAFG00000006272	sfswap	89	67.480	ENSRNOG00000000931	Sfswap	98	52.787	Rattus_norvegicus
ENSGAFG00000006272	sfswap	89	67.751	ENSRBIG00000036330	SFSWAP	99	49.420	Rhinopithecus_bieti
ENSGAFG00000006272	sfswap	90	67.568	ENSRROG00000032001	SFSWAP	99	50.508	Rhinopithecus_roxellana
ENSGAFG00000006272	sfswap	89	67.655	ENSSBOG00000026217	SFSWAP	75	57.182	Saimiri_boliviensis_boliviensis
ENSGAFG00000006272	sfswap	93	51.441	ENSSHAG00000014232	SFSWAP	72	59.601	Sarcophilus_harrisii
ENSGAFG00000006272	sfswap	70	66.667	ENSSFOG00015000766	sfswap	71	65.588	Scleropages_formosus
ENSGAFG00000006272	sfswap	79	77.217	ENSSMAG00000018718	sfswap	77	76.423	Scophthalmus_maximus
ENSGAFG00000006272	sfswap	81	80.244	ENSSDUG00000021680	sfswap	75	80.244	Seriola_dumerili
ENSGAFG00000006272	sfswap	72	67.188	ENSSARG00000000424	SFSWAP	83	60.991	Sorex_araneus
ENSGAFG00000006272	sfswap	87	49.829	ENSSPUG00000010272	SFSWAP	75	54.294	Sphenodon_punctatus
ENSGAFG00000006272	sfswap	78	80.532	ENSSPAG00000014310	sfswap	79	79.352	Stegastes_partitus
ENSGAFG00000006272	sfswap	97	53.264	ENSSSCG00000009744	SFSWAP	96	53.271	Sus_scrofa
ENSGAFG00000006272	sfswap	97	54.180	ENSTGUG00000004623	SFSWAP	77	57.775	Taeniopygia_guttata
ENSGAFG00000006272	sfswap	66	75.556	ENSTTRG00000013478	SFSWAP	73	54.508	Tursiops_truncatus
ENSGAFG00000006272	sfswap	89	67.624	ENSUAMG00000016807	SFSWAP	79	60.469	Ursus_americanus
ENSGAFG00000006272	sfswap	76	68.555	ENSUMAG00000002957	SFSWAP	75	56.224	Ursus_maritimus
ENSGAFG00000006272	sfswap	97	54.825	ENSVVUG00000010753	SFSWAP	74	59.944	Vulpes_vulpes
ENSGAFG00000006272	sfswap	97	46.575	ENSXETG00000009350	sfswap	88	57.453	Xenopus_tropicalis
ENSGAFG00000006272	sfswap	100	96.663	ENSXMAG00000009020	sfswap	100	96.663	Xiphophorus_maculatus