EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000006280 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11783 bases
Position: chrNHOQ01001578.1:5156726-5168508
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009237	zf-RNPHF	PF08080.12	1.1e-08	1	1
ENSGAFP00000009237	RRM_1	PF00076.22	1.1e-31	1	3
ENSGAFP00000009237	RRM_1	PF00076.22	1.1e-31	2	3
ENSGAFP00000009237	RRM_1	PF00076.22	1.1e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009331	-	6004	-	ENSGAFP00000009237	406 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000006280	hnrnph1	96	58.378	ENSGAFG00000005286	HNRNPH3	95	56.818
ENSGAFG00000006280	hnrnph1	86	32.857	ENSGAFG00000009225	esrp2	53	32.857
ENSGAFG00000006280	hnrnph1	80	41.718	ENSGAFG00000004496	grsf1	76	41.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006280	hnrnph1	100	97.543	ENSAPOG00000016614	hnrnph1	100	97.543	Acanthochromis_polyacanthus
ENSGAFG00000006280	hnrnph1	99	97.074	ENSACIG00000008964	hnrnph1	98	97.074	Amphilophus_citrinellus
ENSGAFG00000006280	hnrnph1	100	98.034	ENSAOCG00000008372	hnrnph1	100	98.034	Amphiprion_ocellaris
ENSGAFG00000006280	hnrnph1	100	97.789	ENSAPEG00000012980	hnrnph1	100	97.789	Amphiprion_percula
ENSGAFG00000006280	hnrnph1	100	97.789	ENSATEG00000002792	hnrnph1	100	97.789	Anabas_testudineus
ENSGAFG00000006280	hnrnph1	99	71.586	ENSACAG00000016323	-	80	80.759	Anolis_carolinensis
ENSGAFG00000006280	hnrnph1	84	94.366	ENSACLG00000003313	hnrnph1	97	94.366	Astatotilapia_calliptera
ENSGAFG00000006280	hnrnph1	99	82.555	ENSAMXG00000030703	hnrnph1l	84	82.064	Astyanax_mexicanus
ENSGAFG00000006280	hnrnph1	100	83.252	ENSAMXG00000002483	hnrnph1	99	88.127	Astyanax_mexicanus
ENSGAFG00000006280	hnrnph1	100	95.599	ENSCSEG00000015891	hnrnph1	100	95.599	Cynoglossus_semilaevis
ENSGAFG00000006280	hnrnph1	100	97.291	ENSCVAG00000014097	hnrnph1	100	97.291	Cyprinodon_variegatus
ENSGAFG00000006280	hnrnph1	95	88.432	ENSDARG00000005551	hnrnph1l	99	85.995	Danio_rerio
ENSGAFG00000006280	hnrnph1	93	86.842	ENSDARG00000040881	hnrnph1	94	87.632	Danio_rerio
ENSGAFG00000006280	hnrnph1	96	84.474	ENSELUG00000021437	-	99	87.105	Esox_lucius
ENSGAFG00000006280	hnrnph1	100	86.493	ENSELUG00000006715	hnrnph1	100	83.886	Esox_lucius
ENSGAFG00000006280	hnrnph1	100	95.320	ENSFHEG00000008474	hnrnph1	100	94.089	Fundulus_heteroclitus
ENSGAFG00000006280	hnrnph1	94	88.804	ENSGMOG00000006782	hnrnph1	97	88.804	Gadus_morhua
ENSGAFG00000006280	hnrnph1	100	90.663	ENSGACG00000018352	hnrnph1	99	89.078	Gasterosteus_aculeatus
ENSGAFG00000006280	hnrnph1	84	94.366	ENSHBUG00000010547	hnrnph1	98	94.366	Haplochromis_burtoni
ENSGAFG00000006280	hnrnph1	100	84.086	ENSHCOG00000004513	hnrnph1	100	87.648	Hippocampus_comes
ENSGAFG00000006280	hnrnph1	95	83.033	ENSIPUG00000024047	hnrnph1l	96	81.081	Ictalurus_punctatus
ENSGAFG00000006280	hnrnph1	100	81.553	ENSIPUG00000018262	hnrnph1	100	84.223	Ictalurus_punctatus
ENSGAFG00000006280	hnrnph1	100	95.355	ENSKMAG00000018802	hnrnph1	100	95.110	Kryptolebias_marmoratus
ENSGAFG00000006280	hnrnph1	100	96.314	ENSLBEG00000027811	hnrnph1	100	96.314	Labrus_bergylta
ENSGAFG00000006280	hnrnph1	92	83.871	ENSLOCG00000012510	hnrnph1	91	83.127	Lepisosteus_oculatus
ENSGAFG00000006280	hnrnph1	99	54.147	ENSMMUG00000017392	-	83	57.221	Macaca_mulatta
ENSGAFG00000006280	hnrnph1	99	53.881	ENSMNEG00000030544	-	83	57.221	Macaca_nemestrina
ENSGAFG00000006280	hnrnph1	86	91.398	ENSMAMG00000011478	hnrnph1	99	91.398	Mastacembelus_armatus
ENSGAFG00000006280	hnrnph1	100	98.030	ENSMZEG00005009791	hnrnph1	100	98.030	Maylandia_zebra
ENSGAFG00000006280	hnrnph1	93	93.947	ENSMMOG00000009064	hnrnph1	98	93.684	Mola_mola
ENSGAFG00000006280	hnrnph1	74	51.642	ENSMODG00000002200	-	99	51.045	Monodelphis_domestica
ENSGAFG00000006280	hnrnph1	85	94.150	ENSMALG00000003999	hnrnph1	99	94.150	Monopterus_albus
ENSGAFG00000006280	hnrnph1	84	94.366	ENSNBRG00000015406	hnrnph1	98	94.366	Neolamprologus_brichardi
ENSGAFG00000006280	hnrnph1	100	98.030	ENSONIG00000017754	hnrnph1	100	98.030	Oreochromis_niloticus
ENSGAFG00000006280	hnrnph1	100	95.884	ENSORLG00000006932	hnrnph1	100	95.884	Oryzias_latipes
ENSGAFG00000006280	hnrnph1	100	95.884	ENSORLG00020007881	hnrnph1	100	95.884	Oryzias_latipes_hni
ENSGAFG00000006280	hnrnph1	100	95.884	ENSORLG00015005306	hnrnph1	100	95.884	Oryzias_latipes_hsok
ENSGAFG00000006280	hnrnph1	100	98.039	ENSOMEG00000009827	hnrnph1	100	98.039	Oryzias_melastigma
ENSGAFG00000006280	hnrnph1	93	82.090	ENSPKIG00000009532	-	93	81.095	Paramormyrops_kingsleyae
ENSGAFG00000006280	hnrnph1	100	88.264	ENSPKIG00000018203	hnrnph1l	100	86.553	Paramormyrops_kingsleyae
ENSGAFG00000006280	hnrnph1	100	92.629	ENSPMGG00000012151	hnrnph1	100	93.612	Periophthalmus_magnuspinnatus
ENSGAFG00000006280	hnrnph1	100	99.507	ENSPFOG00000004097	hnrnph1	100	99.507	Poecilia_formosa
ENSGAFG00000006280	hnrnph1	100	99.507	ENSPLAG00000011771	hnrnph1	100	99.507	Poecilia_latipinna
ENSGAFG00000006280	hnrnph1	100	99.754	ENSPMEG00000019446	hnrnph1	100	99.754	Poecilia_mexicana
ENSGAFG00000006280	hnrnph1	100	99.754	ENSPREG00000005780	hnrnph1	100	99.754	Poecilia_reticulata
ENSGAFG00000006280	hnrnph1	100	98.030	ENSPNYG00000000204	hnrnph1	100	98.030	Pundamilia_nyererei
ENSGAFG00000006280	hnrnph1	100	82.767	ENSPNAG00000000439	hnrnph1	100	84.951	Pygocentrus_nattereri
ENSGAFG00000006280	hnrnph1	99	83.619	ENSPNAG00000002784	hnrnph1l	99	82.555	Pygocentrus_nattereri
ENSGAFG00000006280	hnrnph1	98	90.250	ENSSFOG00015022796	hnrnph1l	100	88.078	Scleropages_formosus
ENSGAFG00000006280	hnrnph1	95	89.231	ENSSFOG00015016055	-	94	89.501	Scleropages_formosus
ENSGAFG00000006280	hnrnph1	96	90.932	ENSSMAG00000007820	hnrnph1	96	93.701	Scophthalmus_maximus
ENSGAFG00000006280	hnrnph1	100	98.034	ENSSDUG00000008785	hnrnph1	100	98.034	Seriola_dumerili
ENSGAFG00000006280	hnrnph1	100	98.034	ENSSLDG00000010685	hnrnph1	100	98.034	Seriola_lalandi_dorsalis
ENSGAFG00000006280	hnrnph1	100	97.297	ENSSPAG00000009921	hnrnph1	100	97.297	Stegastes_partitus
ENSGAFG00000006280	hnrnph1	100	95.813	ENSTRUG00000020069	hnrnph1	100	95.813	Takifugu_rubripes
ENSGAFG00000006280	hnrnph1	99	72.398	ENSXETG00000018321	hnrnph1	85	78.706	Xenopus_tropicalis
ENSGAFG00000006280	hnrnph1	93	95.908	ENSXCOG00000009133	hnrnph1	97	95.908	Xiphophorus_couchianus
ENSGAFG00000006280	hnrnph1	93	99.734	ENSXMAG00000021332	hnrnph1	99	99.734	Xiphophorus_maculatus