EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006358 (Gene tree)
Gene ID: -
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 39142 bases
Position: chrNHOQ01001000.1:2783911-2823052
Accession: ZDB-GENE-041014-72
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009418	ResIII	PF04851.15	1.6e-08	1	1
ENSGAFP00000009369	ResIII	PF04851.15	3.9e-08	1	1
ENSGAFP00000009341	ResIII	PF04851.15	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009518	-	4509	-	ENSGAFP00000009418	1502 (aa)	-	-
ENSGAFT00000009438	-	5422	-	ENSGAFP00000009341	1568 (aa)	-	-
ENSGAFT00000009466	-	6673	-	ENSGAFP00000009369	1530 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006358	ino80	98	74.884	ENSG00000128908	INO80	90	83.146	Homo_sapiens
ENSGAFG00000006358	ino80	75	84.501	ENSAPOG00000012586	ino80	99	84.777	Acanthochromis_polyacanthus
ENSGAFG00000006358	ino80	97	74.057	ENSAMEG00000016796	INO80	98	73.479	Ailuropoda_melanoleuca
ENSGAFG00000006358	ino80	93	86.859	ENSACIG00000001918	ino80	97	87.019	Amphilophus_citrinellus
ENSGAFG00000006358	ino80	99	89.615	ENSAOCG00000000490	ino80	99	89.295	Amphiprion_ocellaris
ENSGAFG00000006358	ino80	99	89.744	ENSAPEG00000022911	ino80	99	89.423	Amphiprion_percula
ENSGAFG00000006358	ino80	99	87.972	ENSATEG00000001271	ino80	99	87.972	Anabas_testudineus
ENSGAFG00000006358	ino80	98	75.776	ENSAPLG00000013656	INO80	98	74.550	Anas_platyrhynchos
ENSGAFG00000006358	ino80	93	73.688	ENSACAG00000003531	INO80	99	73.379	Anolis_carolinensis
ENSGAFG00000006358	ino80	98	74.653	ENSANAG00000032223	INO80	98	73.599	Aotus_nancymaae
ENSGAFG00000006358	ino80	94	84.349	ENSACLG00000006610	ino80	98	84.496	Astatotilapia_calliptera
ENSGAFG00000006358	ino80	98	74.215	ENSBTAG00000010380	INO80	98	73.627	Bos_taurus
ENSGAFG00000006358	ino80	98	74.769	ENSCJAG00000020770	-	98	73.647	Callithrix_jacchus
ENSGAFG00000006358	ino80	98	74.310	ENSCAFG00000009492	INO80	98	73.590	Canis_familiaris
ENSGAFG00000006358	ino80	72	70.525	ENSCAFG00020005524	-	98	70.793	Canis_lupus_dingo
ENSGAFG00000006358	ino80	98	74.458	ENSCHIG00000010246	INO80	98	73.627	Capra_hircus
ENSGAFG00000006358	ino80	98	74.753	ENSTSYG00000003252	INO80	98	73.701	Carlito_syrichta
ENSGAFG00000006358	ino80	98	74.967	ENSCPOG00000011386	INO80	98	73.905	Cavia_porcellus
ENSGAFG00000006358	ino80	98	74.769	ENSCCAG00000030680	INO80	98	73.582	Cebus_capucinus
ENSGAFG00000006358	ino80	98	74.950	ENSCATG00000040663	INO80	98	73.823	Cercocebus_atys
ENSGAFG00000006358	ino80	98	75.066	ENSCLAG00000008397	INO80	98	73.941	Chinchilla_lanigera
ENSGAFG00000006358	ino80	98	75.083	ENSCSAG00000007632	INO80	98	73.952	Chlorocebus_sabaeus
ENSGAFG00000006358	ino80	66	77.448	ENSCHOG00000011938	INO80	76	77.448	Choloepus_hoffmanni
ENSGAFG00000006358	ino80	98	75.594	ENSCPBG00000013491	INO80	98	74.374	Chrysemys_picta_bellii
ENSGAFG00000006358	ino80	98	70.106	ENSCANG00000036208	INO80	97	69.181	Colobus_angolensis_palliatus
ENSGAFG00000006358	ino80	98	75.182	ENSCGRG00001013566	Ino80	97	74.369	Cricetulus_griseus_chok1gshd
ENSGAFG00000006358	ino80	98	75.182	ENSCGRG00000001290	Ino80	97	74.369	Cricetulus_griseus_crigri
ENSGAFG00000006358	ino80	93	82.439	ENSCSEG00000019370	ino80	99	82.067	Cynoglossus_semilaevis
ENSGAFG00000006358	ino80	98	91.780	ENSCVAG00000021470	ino80	99	91.496	Cyprinodon_variegatus
ENSGAFG00000006358	ino80	100	79.177	ENSDARG00000070432	ino80	99	79.924	Danio_rerio
ENSGAFG00000006358	ino80	98	74.753	ENSDNOG00000010267	INO80	98	73.701	Dasypus_novemcinctus
ENSGAFG00000006358	ino80	61	64.505	ENSEBUG00000001921	ino80	94	63.754	Eptatretus_burgeri
ENSGAFG00000006358	ino80	98	74.393	ENSEASG00005016405	INO80	98	73.543	Equus_asinus_asinus
ENSGAFG00000006358	ino80	93	78.412	ENSELUG00000001071	ino80	99	78.770	Esox_lucius
ENSGAFG00000006358	ino80	98	74.393	ENSFCAG00000014722	INO80	98	73.543	Felis_catus
ENSGAFG00000006358	ino80	98	75.132	ENSFALG00000006125	INO80	98	73.991	Ficedula_albicollis
ENSGAFG00000006358	ino80	98	74.376	ENSFDAG00000005624	INO80	98	73.526	Fukomys_damarensis
ENSGAFG00000006358	ino80	62	92.442	ENSFHEG00000020436	ino80	88	92.442	Fundulus_heteroclitus
ENSGAFG00000006358	ino80	89	81.812	ENSGMOG00000006031	ino80	99	81.596	Gadus_morhua
ENSGAFG00000006358	ino80	98	75.627	ENSGALG00000008553	INO80	98	74.165	Gallus_gallus
ENSGAFG00000006358	ino80	99	84.997	ENSGACG00000012960	ino80	99	84.997	Gasterosteus_aculeatus
ENSGAFG00000006358	ino80	98	75.545	ENSGAGG00000019203	INO80	98	75.264	Gopherus_agassizii
ENSGAFG00000006358	ino80	95	87.937	ENSHBUG00000022614	ino80	97	87.937	Haplochromis_burtoni
ENSGAFG00000006358	ino80	98	74.688	ENSHGLG00000018136	INO80	98	73.573	Heterocephalus_glaber_female
ENSGAFG00000006358	ino80	97	73.828	ENSHGLG00100006571	INO80	98	72.675	Heterocephalus_glaber_male
ENSGAFG00000006358	ino80	99	82.537	ENSHCOG00000002445	ino80	99	82.595	Hippocampus_comes
ENSGAFG00000006358	ino80	96	79.257	ENSIPUG00000018905	ino80	99	79.894	Ictalurus_punctatus
ENSGAFG00000006358	ino80	98	74.573	ENSSTOG00000000427	INO80	98	73.526	Ictidomys_tridecemlineatus
ENSGAFG00000006358	ino80	98	69.934	ENSJJAG00000016166	Ino80	98	69.063	Jaculus_jaculus
ENSGAFG00000006358	ino80	94	86.123	ENSKMAG00000019273	ino80	99	86.494	Kryptolebias_marmoratus
ENSGAFG00000006358	ino80	94	84.615	ENSLBEG00000024288	ino80	100	84.228	Labrus_bergylta
ENSGAFG00000006358	ino80	98	69.402	ENSLACG00000008666	INO80	99	68.300	Latimeria_chalumnae
ENSGAFG00000006358	ino80	99	78.608	ENSLOCG00000012304	ino80	97	79.753	Lepisosteus_oculatus
ENSGAFG00000006358	ino80	98	74.688	ENSLAFG00000009951	INO80	98	73.637	Loxodonta_africana
ENSGAFG00000006358	ino80	98	75.083	ENSMFAG00000044488	INO80	98	73.952	Macaca_fascicularis
ENSGAFG00000006358	ino80	98	75.083	ENSMMUG00000001737	INO80	98	73.952	Macaca_mulatta
ENSGAFG00000006358	ino80	96	74.673	ENSMNEG00000034906	INO80	98	73.823	Macaca_nemestrina
ENSGAFG00000006358	ino80	98	75.083	ENSMLEG00000042117	INO80	98	73.952	Mandrillus_leucophaeus
ENSGAFG00000006358	ino80	72	76.799	ENSMAMG00000013786	ino80	99	76.529	Mastacembelus_armatus
ENSGAFG00000006358	ino80	94	87.535	ENSMZEG00005013146	ino80	98	87.542	Maylandia_zebra
ENSGAFG00000006358	ino80	86	75.358	ENSMGAG00000011164	INO80	99	75.188	Meleagris_gallopavo
ENSGAFG00000006358	ino80	98	73.729	ENSMAUG00000020670	Ino80	97	73.333	Mesocricetus_auratus
ENSGAFG00000006358	ino80	98	74.096	ENSMICG00000005801	INO80	98	73.060	Microcebus_murinus
ENSGAFG00000006358	ino80	98	75.248	ENSMOCG00000016879	Ino80	98	74.050	Microtus_ochrogaster
ENSGAFG00000006358	ino80	72	76.944	ENSMMOG00000015046	ino80	99	76.311	Mola_mola
ENSGAFG00000006358	ino80	100	73.711	ENSMODG00000000184	INO80	98	74.231	Monodelphis_domestica
ENSGAFG00000006358	ino80	94	84.546	ENSMALG00000016488	ino80	99	84.788	Monopterus_albus
ENSGAFG00000006358	ino80	98	72.798	MGP_CAROLIEiJ_G0024144	Ino80	97	72.363	Mus_caroli
ENSGAFG00000006358	ino80	98	74.851	ENSMUSG00000034154	Ino80	97	74.369	Mus_musculus
ENSGAFG00000006358	ino80	98	74.851	MGP_PahariEiJ_G0025587	Ino80	98	74.050	Mus_pahari
ENSGAFG00000006358	ino80	98	74.785	MGP_SPRETEiJ_G0025060	Ino80	97	74.304	Mus_spretus
ENSGAFG00000006358	ino80	98	74.524	ENSMPUG00000008786	INO80	98	73.671	Mustela_putorius_furo
ENSGAFG00000006358	ino80	98	74.379	ENSMLUG00000017764	INO80	98	73.278	Myotis_lucifugus
ENSGAFG00000006358	ino80	98	74.835	ENSNGAG00000019497	Ino80	98	73.779	Nannospalax_galili
ENSGAFG00000006358	ino80	93	81.933	ENSNBRG00000022086	ino80	98	81.756	Neolamprologus_brichardi
ENSGAFG00000006358	ino80	98	73.135	ENSNLEG00000003454	INO80	98	72.054	Nomascus_leucogenys
ENSGAFG00000006358	ino80	78	63.843	ENSOPRG00000000831	INO80	77	70.732	Ochotona_princeps
ENSGAFG00000006358	ino80	98	74.885	ENSODEG00000016734	INO80	98	73.765	Octodon_degus
ENSGAFG00000006358	ino80	99	88.115	ENSONIG00000000772	ino80	99	87.923	Oreochromis_niloticus
ENSGAFG00000006358	ino80	98	74.819	ENSOCUG00000010763	INO80	98	73.829	Oryctolagus_cuniculus
ENSGAFG00000006358	ino80	99	83.758	ENSORLG00000018028	ino80	99	84.000	Oryzias_latipes
ENSGAFG00000006358	ino80	99	83.885	ENSORLG00015012507	ino80	99	83.935	Oryzias_latipes_hsok
ENSGAFG00000006358	ino80	99	84.234	ENSOMEG00000003791	ino80	99	84.295	Oryzias_melastigma
ENSGAFG00000006358	ino80	98	74.803	ENSOGAG00000008998	INO80	98	73.684	Otolemur_garnettii
ENSGAFG00000006358	ino80	98	74.067	ENSOARG00000020323	INO80	98	73.482	Ovis_aries
ENSGAFG00000006358	ino80	98	74.950	ENSPPAG00000042104	INO80	98	73.823	Pan_paniscus
ENSGAFG00000006358	ino80	98	74.344	ENSPPRG00000011011	INO80	98	73.496	Panthera_pardus
ENSGAFG00000006358	ino80	98	74.081	ENSPTIG00000005911	INO80	98	73.239	Panthera_tigris_altaica
ENSGAFG00000006358	ino80	98	74.950	ENSPTRG00000006939	INO80	98	73.823	Pan_troglodytes
ENSGAFG00000006358	ino80	98	75.083	ENSPANG00000019131	INO80	98	73.952	Papio_anubis
ENSGAFG00000006358	ino80	93	78.516	ENSPKIG00000021450	ino80	99	77.865	Paramormyrops_kingsleyae
ENSGAFG00000006358	ino80	98	74.736	ENSPSIG00000014403	INO80	98	73.924	Pelodiscus_sinensis
ENSGAFG00000006358	ino80	74	71.540	ENSPEMG00000013114	-	99	71.713	Peromyscus_maniculatus_bairdii
ENSGAFG00000006358	ino80	100	73.711	ENSPCIG00000027848	INO80	98	74.231	Phascolarctos_cinereus
ENSGAFG00000006358	ino80	98	95.152	ENSPFOG00000013082	ino80	99	95.000	Poecilia_formosa
ENSGAFG00000006358	ino80	61	92.241	ENSPMEG00000021422	ino80	86	92.341	Poecilia_mexicana
ENSGAFG00000006358	ino80	99	93.894	ENSPREG00000013650	ino80	99	93.894	Poecilia_reticulata
ENSGAFG00000006358	ino80	98	72.902	ENSPPYG00000006368	INO80	98	71.825	Pongo_abelii
ENSGAFG00000006358	ino80	100	71.527	ENSPCOG00000022332	INO80	97	72.692	Propithecus_coquereli
ENSGAFG00000006358	ino80	98	72.661	ENSPVAG00000001852	INO80	98	71.787	Pteropus_vampyrus
ENSGAFG00000006358	ino80	92	84.469	ENSPNYG00000002995	ino80	97	84.557	Pundamilia_nyererei
ENSGAFG00000006358	ino80	100	79.747	ENSPNAG00000010386	ino80	99	79.924	Pygocentrus_nattereri
ENSGAFG00000006358	ino80	98	74.521	ENSRNOG00000014483	Ino80	97	74.045	Rattus_norvegicus
ENSGAFG00000006358	ino80	98	75.083	ENSRBIG00000031765	INO80	98	73.952	Rhinopithecus_bieti
ENSGAFG00000006358	ino80	98	75.083	ENSRROG00000033143	INO80	98	73.952	Rhinopithecus_roxellana
ENSGAFG00000006358	ino80	95	76.983	ENSSBOG00000023493	INO80	98	75.710	Saimiri_boliviensis_boliviensis
ENSGAFG00000006358	ino80	100	73.459	ENSSHAG00000016349	INO80	98	73.974	Sarcophilus_harrisii
ENSGAFG00000006358	ino80	97	78.576	ENSSFOG00015000183	ino80	99	78.968	Scleropages_formosus
ENSGAFG00000006358	ino80	99	87.452	ENSSMAG00000007221	ino80	100	88.418	Scophthalmus_maximus
ENSGAFG00000006358	ino80	99	89.010	ENSSDUG00000009957	ino80	99	88.690	Seriola_dumerili
ENSGAFG00000006358	ino80	99	86.347	ENSSLDG00000000389	ino80	99	84.726	Seriola_lalandi_dorsalis
ENSGAFG00000006358	ino80	98	71.766	ENSSARG00000007876	INO80	97	70.916	Sorex_araneus
ENSGAFG00000006358	ino80	94	84.941	ENSSPAG00000007779	ino80	98	85.411	Stegastes_partitus
ENSGAFG00000006358	ino80	98	73.970	ENSSSCG00000004753	INO80	98	73.804	Sus_scrofa
ENSGAFG00000006358	ino80	98	75.478	ENSTGUG00000010786	INO80	98	74.134	Taeniopygia_guttata
ENSGAFG00000006358	ino80	96	87.305	ENSTRUG00000013026	ino80	98	87.305	Takifugu_rubripes
ENSGAFG00000006358	ino80	98	73.140	ENSTTRG00000011479	INO80	98	72.190	Tursiops_truncatus
ENSGAFG00000006358	ino80	75	70.583	ENSUMAG00000012190	-	99	70.840	Ursus_maritimus
ENSGAFG00000006358	ino80	100	67.296	ENSVPAG00000002838	INO80	98	68.015	Vicugna_pacos
ENSGAFG00000006358	ino80	98	74.310	ENSVVUG00000026698	INO80	98	73.590	Vulpes_vulpes
ENSGAFG00000006358	ino80	97	66.910	ENSXETG00000034272	INO80	97	66.429	Xenopus_tropicalis
ENSGAFG00000006358	ino80	100	95.359	ENSXMAG00000006742	ino80	100	95.359	Xiphophorus_maculatus