EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000006508 (Gene tree)
Gene ID
-
Gene Symbol
patl1
Alias
fa11d04|wu:fa11d04|zgc:158239
Full Name
protein associated with topoisomerase II homolog 1 (yeast)
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
9226 bases
Position
chrNHOQ01000533.1:141101-150326
Accession
ZDB-GENE-070209-83
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000009561PAT1PF09770.91.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000009662-2957-ENSGAFP00000009561796 (aa)--
Gene Model
Click here to download ENSGAFG00000006508's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006508's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000006508patl15235.597ENSGAFG00000019344patl25636.591
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000006508patl18458.904ENSG00000166889PATL16458.904Homo_sapiens
ENSGAFG00000006508patl15435.541ENSAPOG00000022988patl25837.000Acanthochromis_polyacanthus
ENSGAFG00000006508patl19978.491ENSAPOG00000021290patl19978.994Acanthochromis_polyacanthus
ENSGAFG00000006508patl18458.904ENSAMEG00000014215PATL16458.904Ailuropoda_melanoleuca
ENSGAFG00000006508patl15037.931ENSAMEG00000014997PATL27538.250Ailuropoda_melanoleuca
ENSGAFG00000006508patl19978.250ENSACIG00000005182patl19978.875Amphilophus_citrinellus
ENSGAFG00000006508patl15135.363ENSAOCG00000023738patl25136.020Amphiprion_ocellaris
ENSGAFG00000006508patl19481.555ENSAOCG00000021993patl19581.722Amphiprion_ocellaris
ENSGAFG00000006508patl110081.851ENSAPEG00000021391patl110084.179Amphiprion_percula
ENSGAFG00000006508patl15135.225ENSAPEG00000011299patl26135.949Amphiprion_percula
ENSGAFG00000006508patl110079.731ENSATEG00000002230patl110081.685Anabas_testudineus
ENSGAFG00000006508patl15136.235ENSATEG00000019567patl26037.028Anabas_testudineus
ENSGAFG00000006508patl16136.328ENSAPLG00000003980PATL26439.950Anas_platyrhynchos
ENSGAFG00000006508patl15348.276ENSAPLG00000013394PATL16453.943Anas_platyrhynchos
ENSGAFG00000006508patl17151.037ENSACAG00000006607PATL18953.095Anolis_carolinensis
ENSGAFG00000006508patl18458.904ENSANAG00000023078PATL16458.904Aotus_nancymaae
ENSGAFG00000006508patl15136.691ENSACLG00000010326patl25337.374Astatotilapia_calliptera
ENSGAFG00000006508patl110082.971ENSACLG00000005144patl110083.937Astatotilapia_calliptera
ENSGAFG00000006508patl15338.322ENSAMXG00000020293patl25738.903Astyanax_mexicanus
ENSGAFG00000006508patl19583.920ENSAMXG00000010731patl19485.464Astyanax_mexicanus
ENSGAFG00000006508patl18458.904ENSBTAG00000005913PATL16458.904Bos_taurus
ENSGAFG00000006508patl15336.712ENSCJAG00000002379PATL27237.990Callithrix_jacchus
ENSGAFG00000006508patl18458.904ENSCJAG00000016192PATL16458.904Callithrix_jacchus
ENSGAFG00000006508patl15038.592ENSCAFG00000013629PATL27338.806Canis_familiaris
ENSGAFG00000006508patl18458.904ENSCAFG00000007581PATL16458.904Canis_familiaris
ENSGAFG00000006508patl18458.904ENSCAFG00020001648PATL16758.904Canis_lupus_dingo
ENSGAFG00000006508patl15038.592ENSCAFG00020022169PATL27238.806Canis_lupus_dingo
ENSGAFG00000006508patl15339.545ENSCHIG00000026665PATL27440.394Capra_hircus
ENSGAFG00000006508patl18458.904ENSCHIG00000025913PATL16558.904Capra_hircus
ENSGAFG00000006508patl18460.274ENSTSYG00000012748PATL16360.274Carlito_syrichta
ENSGAFG00000006508patl15337.923ENSTSYG00000032456PATL27238.710Carlito_syrichta
ENSGAFG00000006508patl18460.274ENSCAPG00000013668PATL16360.274Cavia_aperea
ENSGAFG00000006508patl18460.274ENSCPOG00000006827PATL16260.274Cavia_porcellus
ENSGAFG00000006508patl18458.904ENSCCAG00000023759PATL16458.904Cebus_capucinus
ENSGAFG00000006508patl18458.904ENSCATG00000009629PATL16458.904Cercocebus_atys
ENSGAFG00000006508patl18363.077ENSCLAG00000003427PATL16463.077Chinchilla_lanigera
ENSGAFG00000006508patl15036.603ENSCLAG00000014407PATL27338.442Chinchilla_lanigera
ENSGAFG00000006508patl17650.000ENSCSAG00000006095PATL16153.318Chlorocebus_sabaeus
ENSGAFG00000006508patl16358.000ENSCHOG00000001611PATL18358.000Choloepus_hoffmanni
ENSGAFG00000006508patl15338.565ENSCPBG00000006150PATL26039.552Chrysemys_picta_bellii
ENSGAFG00000006508patl15337.500ENSCANG00000013856PATL27238.958Colobus_angolensis_palliatus
ENSGAFG00000006508patl18458.333ENSCANG00000039197PATL16458.333Colobus_angolensis_palliatus
ENSGAFG00000006508patl18460.563ENSCGRG00001024927Patl16460.563Cricetulus_griseus_chok1gshd
ENSGAFG00000006508patl18360.317ENSCGRG00000000461Patl16360.317Cricetulus_griseus_crigri
ENSGAFG00000006508patl15234.491ENSCSEG00000009438patl25735.190Cynoglossus_semilaevis
ENSGAFG00000006508patl110077.551ENSCSEG00000008261patl110080.672Cynoglossus_semilaevis
ENSGAFG00000006508patl15133.971ENSCVAG00000016203patl26034.772Cyprinodon_variegatus
ENSGAFG00000006508patl19087.304ENSCVAG00000006664patl19987.304Cyprinodon_variegatus
ENSGAFG00000006508patl110072.727ENSDARG00000017423patl110072.201Danio_rerio
ENSGAFG00000006508patl18355.385ENSDNOG00000038865PATL17652.732Dasypus_novemcinctus
ENSGAFG00000006508patl18460.274ENSDORG00000000237Patl16460.274Dipodomys_ordii
ENSGAFG00000006508patl18458.904ENSEASG00005007963PATL19458.904Equus_asinus_asinus
ENSGAFG00000006508patl15436.054ENSEASG00005017984PATL27136.750Equus_asinus_asinus
ENSGAFG00000006508patl18458.904ENSECAG00000011411PATL16458.904Equus_caballus
ENSGAFG00000006508patl15336.986ENSECAG00000013462PATL27237.811Equus_caballus
ENSGAFG00000006508patl110072.195ENSELUG00000024249patl110072.249Esox_lucius
ENSGAFG00000006508patl16135.029ENSELUG00000023244patl25437.531Esox_lucius
ENSGAFG00000006508patl18458.904ENSFCAG00000015573PATL16458.904Felis_catus
ENSGAFG00000006508patl15338.128ENSFCAG00000027170PATL27339.055Felis_catus
ENSGAFG00000006508patl19946.198ENSFALG00000012150PATL19943.187Ficedula_albicollis
ENSGAFG00000006508patl16135.446ENSFALG00000009768PATL25538.131Ficedula_albicollis
ENSGAFG00000006508patl18358.462ENSFDAG00000016128PATL16458.462Fukomys_damarensis
ENSGAFG00000006508patl19987.250ENSFHEG00000017790patl110087.826Fundulus_heteroclitus
ENSGAFG00000006508patl15136.569ENSGMOG00000005666patl210037.621Gadus_morhua
ENSGAFG00000006508patl15636.481ENSGALG00000002167PATL25038.000Gallus_gallus
ENSGAFG00000006508patl19549.622ENSGALG00000042641PATL19463.235Gallus_gallus
ENSGAFG00000006508patl19971.152ENSGACG00000016448patl15387.755Gasterosteus_aculeatus
ENSGAFG00000006508patl110044.577ENSGAGG00000004461PATL19266.667Gopherus_agassizii
ENSGAFG00000006508patl18458.904ENSGGOG00000004335PATL16558.904Gorilla_gorilla
ENSGAFG00000006508patl15337.978ENSGGOG00000025923PATL27239.461Gorilla_gorilla
ENSGAFG00000006508patl110082.367ENSHBUG00000005365patl110083.696Haplochromis_burtoni
ENSGAFG00000006508patl15136.779ENSHBUG00000005929patl26037.121Haplochromis_burtoni
ENSGAFG00000006508patl18461.644ENSHGLG00000018173PATL16461.644Heterocephalus_glaber_female
ENSGAFG00000006508patl18256.452ENSHGLG00100003453PATL16456.452Heterocephalus_glaber_male
ENSGAFG00000006508patl15136.000ENSHCOG00000016754patl25436.524Hippocampus_comes
ENSGAFG00000006508patl110075.601ENSHCOG00000001898patl110076.840Hippocampus_comes
ENSGAFG00000006508patl15834.843ENSIPUG00000020692patl25638.155Ictalurus_punctatus
ENSGAFG00000006508patl18359.677ENSSTOG00000013764PATL16359.677Ictidomys_tridecemlineatus
ENSGAFG00000006508patl15537.199ENSSTOG00000033848PATL27239.409Ictidomys_tridecemlineatus
ENSGAFG00000006508patl18360.000ENSJJAG00000010135Patl16460.000Jaculus_jaculus
ENSGAFG00000006508patl110084.458ENSKMAG00000020848patl110084.970Kryptolebias_marmoratus
ENSGAFG00000006508patl110081.348ENSLBEG00000023617patl110082.671Labrus_bergylta
ENSGAFG00000006508patl15237.269ENSLBEG00000022344patl25338.131Labrus_bergylta
ENSGAFG00000006508patl17866.071ENSLACG00000004640PATL16466.071Latimeria_chalumnae
ENSGAFG00000006508patl110061.922ENSLOCG00000000717patl110061.882Lepisosteus_oculatus
ENSGAFG00000006508patl110045.665ENSLAFG00000015161PATL16458.904Loxodonta_africana
ENSGAFG00000006508patl15136.744ENSLAFG00000031124PATL27138.860Loxodonta_africana
ENSGAFG00000006508patl18458.904ENSMFAG00000040851PATL16458.904Macaca_fascicularis
ENSGAFG00000006508patl18458.904ENSMMUG00000017287PATL16458.904Macaca_mulatta
ENSGAFG00000006508patl18458.904ENSMNEG00000038692PATL16458.904Macaca_nemestrina
ENSGAFG00000006508patl18458.904ENSMLEG00000030044PATL16458.904Mandrillus_leucophaeus
ENSGAFG00000006508patl15135.800ENSMAMG00000013327patl26036.203Mastacembelus_armatus
ENSGAFG00000006508patl110079.493ENSMAMG00000003950patl110081.325Mastacembelus_armatus
ENSGAFG00000006508patl110083.092ENSMZEG00005013404patl110084.058Maylandia_zebra
ENSGAFG00000006508patl15136.691ENSMZEG00005014292patl25337.374Maylandia_zebra
ENSGAFG00000006508patl19244.262ENSMGAG00000003406PATL17053.425Meleagris_gallopavo
ENSGAFG00000006508patl15536.245ENSMGAG00000001309PATL26438.693Meleagris_gallopavo
ENSGAFG00000006508patl17544.240ENSMAUG00000012059Patl17256.494Mesocricetus_auratus
ENSGAFG00000006508patl15036.842ENSMAUG00000001008Patl27537.284Mesocricetus_auratus
ENSGAFG00000006508patl18457.534ENSMICG00000004172PATL16257.534Microcebus_murinus
ENSGAFG00000006508patl110046.012ENSMOCG00000010087Patl16460.563Microtus_ochrogaster
ENSGAFG00000006508patl17896.552ENSMMOG00000013711patl19489.706Mola_mola
ENSGAFG00000006508patl15338.731ENSMODG00000017690PATL27139.759Monodelphis_domestica
ENSGAFG00000006508patl18459.459ENSMODG00000020201PATL16461.111Monodelphis_domestica
ENSGAFG00000006508patl19573.062ENSMALG00000018706patl15589.488Monopterus_albus
ENSGAFG00000006508patl18460.274MGP_CAROLIEiJ_G0022739Patl16460.274Mus_caroli
ENSGAFG00000006508patl18460.274ENSMUSG00000046139Patl16460.274Mus_musculus
ENSGAFG00000006508patl18460.274MGP_PahariEiJ_G0014233Patl16460.274Mus_pahari
ENSGAFG00000006508patl18460.274MGP_SPRETEiJ_G0023652Patl16460.274Mus_spretus
ENSGAFG00000006508patl18458.904ENSMPUG00000014607PATL16458.904Mustela_putorius_furo
ENSGAFG00000006508patl18458.904ENSMLUG00000011169PATL16658.904Myotis_lucifugus
ENSGAFG00000006508patl18458.904ENSNGAG00000003682Patl16458.904Nannospalax_galili
ENSGAFG00000006508patl15137.081ENSNBRG00000011745patl25737.531Neolamprologus_brichardi
ENSGAFG00000006508patl16973.604ENSNBRG00000015372patl19356.438Neolamprologus_brichardi
ENSGAFG00000006508patl19944.340ENSNLEG00000013081PATL16558.904Nomascus_leucogenys
ENSGAFG00000006508patl15337.698ENSNLEG00000005673PATL27339.163Nomascus_leucogenys
ENSGAFG00000006508patl16057.051ENSMEUG00000009391PATL17457.051Notamacropus_eugenii
ENSGAFG00000006508patl16254.762ENSOPRG00000007963PATL17654.762Ochotona_princeps
ENSGAFG00000006508patl15347.418ENSODEG00000001792PATL17054.037Octodon_degus
ENSGAFG00000006508patl110082.467ENSONIG00000004170patl110084.160Oreochromis_niloticus
ENSGAFG00000006508patl15434.968ENSOCUG00000006339PATL27537.000Oryctolagus_cuniculus
ENSGAFG00000006508patl18458.904ENSOCUG00000002156PATL16458.904Oryctolagus_cuniculus
ENSGAFG00000006508patl15136.300ENSORLG00000005780patl25436.842Oryzias_latipes
ENSGAFG00000006508patl15136.300ENSORLG00020016506patl25236.842Oryzias_latipes_hni
ENSGAFG00000006508patl17584.488ENSORLG00015022240patl110074.442Oryzias_latipes_hsok
ENSGAFG00000006508patl15136.300ENSORLG00015014500patl25436.842Oryzias_latipes_hsok
ENSGAFG00000006508patl15036.520ENSOMEG00000021628patl25636.524Oryzias_melastigma
ENSGAFG00000006508patl15436.735ENSOGAG00000004709PATL27237.783Otolemur_garnettii
ENSGAFG00000006508patl18458.904ENSOGAG00000004351PATL16458.904Otolemur_garnettii
ENSGAFG00000006508patl18358.462ENSOARG00000012005PATL16158.462Ovis_aries
ENSGAFG00000006508patl15238.106ENSOARG00000003762PATL27239.348Ovis_aries
ENSGAFG00000006508patl15337.698ENSPPAG00000007221PATL27239.163Pan_paniscus
ENSGAFG00000006508patl18458.904ENSPPAG00000034275PATL16658.904Pan_paniscus
ENSGAFG00000006508patl18358.462ENSPPRG00000020639PATL16458.462Panthera_pardus
ENSGAFG00000006508patl15337.443ENSPPRG00000004279PATL27338.308Panthera_pardus
ENSGAFG00000006508patl15337.443ENSPTIG00000018964PATL27338.308Panthera_tigris_altaica
ENSGAFG00000006508patl18458.904ENSPTIG00000019298PATL16458.904Panthera_tigris_altaica
ENSGAFG00000006508patl18458.904ENSPTRG00000003697PATL19458.904Pan_troglodytes
ENSGAFG00000006508patl18458.904ENSPANG00000035620PATL16458.904Papio_anubis
ENSGAFG00000006508patl110072.761ENSPKIG00000016224patl110071.693Paramormyrops_kingsleyae
ENSGAFG00000006508patl18365.000ENSPSIG00000016206PATL16065.000Pelodiscus_sinensis
ENSGAFG00000006508patl110078.986ENSPMGG00000002644patl110078.863Periophthalmus_magnuspinnatus
ENSGAFG00000006508patl15134.198ENSPMGG00000014550patl26235.101Periophthalmus_magnuspinnatus
ENSGAFG00000006508patl110045.612ENSPEMG00000014215Patl16460.563Peromyscus_maniculatus_bairdii
ENSGAFG00000006508patl15236.569ENSPEMG00000016509Patl27138.701Peromyscus_maniculatus_bairdii
ENSGAFG00000006508patl15139.524ENSPCIG00000018256PATL27640.152Phascolarctos_cinereus
ENSGAFG00000006508patl19150.523ENSPCIG00000010852PATL16461.111Phascolarctos_cinereus
ENSGAFG00000006508patl110093.116ENSPFOG00000007768patl110095.225Poecilia_formosa
ENSGAFG00000006508patl110095.885ENSPLAG00000018465patl110095.885Poecilia_latipinna
ENSGAFG00000006508patl110095.636ENSPMEG00000006555patl110095.636Poecilia_mexicana
ENSGAFG00000006508patl18993.706ENSPREG00000003874patl19593.427Poecilia_reticulata
ENSGAFG00000006508patl18458.904ENSPPYG00000003230PATL16458.904Pongo_abelii
ENSGAFG00000006508patl18458.904ENSPCOG00000020770PATL19458.904Propithecus_coquereli
ENSGAFG00000006508patl15338.274ENSPCOG00000000295PATL29940.374Propithecus_coquereli
ENSGAFG00000006508patl17648.558ENSPVAG00000015239PATL16350.602Pteropus_vampyrus
ENSGAFG00000006508patl15136.538ENSPNYG00000017381patl26036.869Pundamilia_nyererei
ENSGAFG00000006508patl19089.752ENSPNYG00000018936patl19989.506Pundamilia_nyererei
ENSGAFG00000006508patl110074.844ENSPNAG00000017907patl110075.465Pygocentrus_nattereri
ENSGAFG00000006508patl15337.916ENSPNAG00000002315patl25739.500Pygocentrus_nattereri
ENSGAFG00000006508patl18460.274ENSRNOG00000021052Patl16460.274Rattus_norvegicus
ENSGAFG00000006508patl18458.904ENSRBIG00000032263PATL18458.904Rhinopithecus_bieti
ENSGAFG00000006508patl18458.904ENSRROG00000032861PATL16458.904Rhinopithecus_roxellana
ENSGAFG00000006508patl110044.028ENSSBOG00000025195PATL16658.904Saimiri_boliviensis_boliviensis
ENSGAFG00000006508patl110045.662ENSSHAG00000004309PATL16461.111Sarcophilus_harrisii
ENSGAFG00000006508patl110072.354ENSSFOG00015009614patl110073.259Scleropages_formosus
ENSGAFG00000006508patl15136.429ENSSMAG00000017262patl26336.962Scophthalmus_maximus
ENSGAFG00000006508patl110079.663ENSSMAG00000009482patl110081.731Scophthalmus_maximus
ENSGAFG00000006508patl110079.310ENSSDUG00000005362patl110081.451Seriola_dumerili
ENSGAFG00000006508patl15137.028ENSSDUG00000022927patl25437.215Seriola_dumerili
ENSGAFG00000006508patl15137.176ENSSLDG00000017922patl25937.374Seriola_lalandi_dorsalis
ENSGAFG00000006508patl110079.167ENSSLDG00000019146patl110081.310Seriola_lalandi_dorsalis
ENSGAFG00000006508patl15950.847ENSSARG00000009600PATL15554.739Sorex_araneus
ENSGAFG00000006508patl17551.840ENSSPUG00000009453PATL19363.889Sphenodon_punctatus
ENSGAFG00000006508patl19979.874ENSSPAG00000003187patl19980.377Stegastes_partitus
ENSGAFG00000006508patl15135.714ENSSPAG00000004784patl26136.272Stegastes_partitus
ENSGAFG00000006508patl18458.904ENSSSCG00000013124PATL16458.904Sus_scrofa
ENSGAFG00000006508patl19945.665ENSTGUG00000006222PATL16855.924Taeniopygia_guttata
ENSGAFG00000006508patl110069.157ENSTRUG00000000709patl110068.689Takifugu_rubripes
ENSGAFG00000006508patl17452.308ENSTBEG00000000796PATL16256.410Tupaia_belangeri
ENSGAFG00000006508patl16556.410ENSTTRG00000009389PATL18056.410Tursiops_truncatus
ENSGAFG00000006508patl15037.713ENSUAMG00000018533PATL27138.025Ursus_americanus
ENSGAFG00000006508patl18265.306ENSUMAG00000018634PATL16565.306Ursus_maritimus
ENSGAFG00000006508patl15037.713ENSUMAG00000007738PATL27138.025Ursus_maritimus
ENSGAFG00000006508patl15038.889ENSVVUG00000011576PATL27338.806Vulpes_vulpes
ENSGAFG00000006508patl18457.534ENSVVUG00000016668PATL16757.534Vulpes_vulpes
ENSGAFG00000006508patl17196.610ENSXCOG00000010808patl110096.610Xiphophorus_couchianus
ENSGAFG00000006508patl110097.747ENSXMAG00000013834patl110097.747Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us