EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006578 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrNHOQ01001156.1:5029973-5032708
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009662	PseudoU_synth_1	PF01416.20	2.6e-15	1	1
ENSGAFP00000009663	PseudoU_synth_1	PF01416.20	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009766	-	1567	-	ENSGAFP00000009663	397 (aa)	-	-
ENSGAFT00000009764	-	1627	-	ENSGAFP00000009662	417 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006578	pus1	89	67.473	ENSG00000177192	PUS1	91	70.085	Homo_sapiens
ENSGAFG00000006578	pus1	100	84.086	ENSAPOG00000007254	pus1	100	84.086	Acanthochromis_polyacanthus
ENSGAFG00000006578	pus1	90	66.133	ENSAMEG00000013715	PUS1	90	66.133	Ailuropoda_melanoleuca
ENSGAFG00000006578	pus1	100	80.191	ENSACIG00000009169	pus1	100	80.191	Amphilophus_citrinellus
ENSGAFG00000006578	pus1	100	85.511	ENSAOCG00000022207	pus1	100	85.511	Amphiprion_ocellaris
ENSGAFG00000006578	pus1	100	85.273	ENSAPEG00000006039	pus1	99	86.957	Amphiprion_percula
ENSGAFG00000006578	pus1	93	84.910	ENSATEG00000020688	pus1	100	84.910	Anabas_testudineus
ENSGAFG00000006578	pus1	82	71.930	ENSACAG00000007367	PUS1	91	71.930	Anolis_carolinensis
ENSGAFG00000006578	pus1	78	69.444	ENSANAG00000036192	PUS1	99	69.444	Aotus_nancymaae
ENSGAFG00000006578	pus1	100	84.561	ENSACLG00000020868	pus1	100	86.445	Astatotilapia_calliptera
ENSGAFG00000006578	pus1	96	72.569	ENSAMXG00000008710	pus1	92	72.569	Astyanax_mexicanus
ENSGAFG00000006578	pus1	96	62.035	ENSBTAG00000012990	PUS1	99	62.500	Bos_taurus
ENSGAFG00000006578	pus1	82	37.989	WBGene00004248	pus-1	85	37.989	Caenorhabditis_elegans
ENSGAFG00000006578	pus1	61	69.685	ENSCJAG00000003720	PUS1	70	69.380	Callithrix_jacchus
ENSGAFG00000006578	pus1	88	67.027	ENSCAFG00000006429	PUS1	87	70.201	Canis_familiaris
ENSGAFG00000006578	pus1	83	70.201	ENSCAFG00020010737	PUS1	81	70.201	Canis_lupus_dingo
ENSGAFG00000006578	pus1	95	63.000	ENSCHIG00000000487	PUS1	99	63.000	Capra_hircus
ENSGAFG00000006578	pus1	88	67.575	ENSTSYG00000032605	PUS1	99	68.120	Carlito_syrichta
ENSGAFG00000006578	pus1	72	72.241	ENSCAPG00000006421	PUS1	99	68.519	Cavia_aperea
ENSGAFG00000006578	pus1	82	69.298	ENSCPOG00000001027	PUS1	87	65.405	Cavia_porcellus
ENSGAFG00000006578	pus1	82	69.883	ENSCCAG00000015879	PUS1	90	68.712	Cebus_capucinus
ENSGAFG00000006578	pus1	93	64.433	ENSCATG00000032870	PUS1	83	72.697	Cercocebus_atys
ENSGAFG00000006578	pus1	82	69.006	ENSCLAG00000011689	PUS1	87	65.135	Chinchilla_lanigera
ENSGAFG00000006578	pus1	93	64.691	ENSCSAG00000001879	PUS1	90	64.691	Chlorocebus_sabaeus
ENSGAFG00000006578	pus1	75	72.293	ENSCPBG00000024715	PUS1	93	70.031	Chrysemys_picta_bellii
ENSGAFG00000006578	pus1	82	44.606	ENSCING00000009426	-	91	44.606	Ciona_intestinalis
ENSGAFG00000006578	pus1	76	44.514	ENSCSAVG00000003751	-	66	44.514	Ciona_savignyi
ENSGAFG00000006578	pus1	88	60.490	ENSCANG00000035561	PUS1	89	63.222	Colobus_angolensis_palliatus
ENSGAFG00000006578	pus1	86	68.056	ENSCGRG00001019592	Pus1	84	68.056	Cricetulus_griseus_chok1gshd
ENSGAFG00000006578	pus1	86	68.056	ENSCGRG00000004048	Pus1	91	68.056	Cricetulus_griseus_crigri
ENSGAFG00000006578	pus1	100	75.059	ENSCSEG00000003629	pus1	100	75.059	Cynoglossus_semilaevis
ENSGAFG00000006578	pus1	100	87.770	ENSCVAG00000001265	pus1	100	87.770	Cyprinodon_variegatus
ENSGAFG00000006578	pus1	92	68.146	ENSDARG00000045562	pus1	97	75.735	Danio_rerio
ENSGAFG00000006578	pus1	85	67.324	ENSDNOG00000045576	PUS1	99	68.098	Dasypus_novemcinctus
ENSGAFG00000006578	pus1	78	69.444	ENSDORG00000011455	Pus1	99	69.444	Dipodomys_ordii
ENSGAFG00000006578	pus1	82	46.154	FBgn0038811	PUS1	84	46.154	Drosophila_melanogaster
ENSGAFG00000006578	pus1	82	69.591	ENSETEG00000019160	PUS1	85	68.481	Echinops_telfairi
ENSGAFG00000006578	pus1	82	44.077	ENSEBUG00000000368	-	68	43.989	Eptatretus_burgeri
ENSGAFG00000006578	pus1	83	69.452	ENSEASG00005016535	PUS1	80	69.452	Equus_asinus_asinus
ENSGAFG00000006578	pus1	83	69.452	ENSECAG00000006965	PUS1	87	69.452	Equus_caballus
ENSGAFG00000006578	pus1	93	75.448	ENSELUG00000010424	pus1	99	75.448	Esox_lucius
ENSGAFG00000006578	pus1	83	69.075	ENSFCAG00000010780	PUS1	81	69.679	Felis_catus
ENSGAFG00000006578	pus1	94	64.373	ENSFALG00000008273	PUS1	95	64.373	Ficedula_albicollis
ENSGAFG00000006578	pus1	88	67.120	ENSFDAG00000012518	PUS1	91	66.223	Fukomys_damarensis
ENSGAFG00000006578	pus1	100	89.952	ENSFHEG00000010504	pus1	100	89.952	Fundulus_heteroclitus
ENSGAFG00000006578	pus1	94	74.680	ENSGMOG00000008143	pus1	99	74.680	Gadus_morhua
ENSGAFG00000006578	pus1	90	68.158	ENSGALG00000002354	PUS1	93	68.158	Gallus_gallus
ENSGAFG00000006578	pus1	100	81.948	ENSGACG00000017566	pus1	99	84.143	Gasterosteus_aculeatus
ENSGAFG00000006578	pus1	79	68.997	ENSGAGG00000016730	-	94	68.997	Gopherus_agassizii
ENSGAFG00000006578	pus1	61	30.314	ENSGAGG00000000160	PUS3	52	30.314	Gopherus_agassizii
ENSGAFG00000006578	pus1	92	66.146	ENSGGOG00000009178	PUS1	87	69.939	Gorilla_gorilla
ENSGAFG00000006578	pus1	100	85.036	ENSHBUG00000001316	pus1	100	86.957	Haplochromis_burtoni
ENSGAFG00000006578	pus1	68	30.284	ENSHGLG00000015753	-	80	30.284	Heterocephalus_glaber_female
ENSGAFG00000006578	pus1	88	64.850	ENSHGLG00000016086	PUS1	93	64.850	Heterocephalus_glaber_female
ENSGAFG00000006578	pus1	88	64.578	ENSHGLG00100019362	PUS1	93	64.578	Heterocephalus_glaber_male
ENSGAFG00000006578	pus1	100	75.895	ENSHCOG00000014288	pus1	96	75.895	Hippocampus_comes
ENSGAFG00000006578	pus1	93	75.711	ENSIPUG00000010387	pus1	91	78.630	Ictalurus_punctatus
ENSGAFG00000006578	pus1	83	69.075	ENSSTOG00000011245	PUS1	81	69.075	Ictidomys_tridecemlineatus
ENSGAFG00000006578	pus1	88	66.485	ENSJJAG00000000088	Pus1	86	66.485	Jaculus_jaculus
ENSGAFG00000006578	pus1	100	79.572	ENSKMAG00000012702	pus1	100	79.572	Kryptolebias_marmoratus
ENSGAFG00000006578	pus1	95	82.915	ENSLBEG00000002845	pus1	98	82.915	Labrus_bergylta
ENSGAFG00000006578	pus1	86	68.232	ENSLACG00000018598	PUS1	94	66.227	Latimeria_chalumnae
ENSGAFG00000006578	pus1	78	57.407	ENSLACG00000016044	-	98	57.407	Latimeria_chalumnae
ENSGAFG00000006578	pus1	91	68.312	ENSLOCG00000006127	pus1	97	68.312	Lepisosteus_oculatus
ENSGAFG00000006578	pus1	84	67.898	ENSLAFG00000028731	PUS1	94	67.898	Loxodonta_africana
ENSGAFG00000006578	pus1	93	64.691	ENSMFAG00000041194	PUS1	83	73.026	Macaca_fascicularis
ENSGAFG00000006578	pus1	88	67.302	ENSMMUG00000031463	PUS1	87	73.026	Macaca_mulatta
ENSGAFG00000006578	pus1	93	64.691	ENSMNEG00000002814	PUS1	83	73.026	Macaca_nemestrina
ENSGAFG00000006578	pus1	73	73.026	ENSMLEG00000043560	PUS1	92	73.179	Mandrillus_leucophaeus
ENSGAFG00000006578	pus1	100	83.848	ENSMAMG00000007371	pus1	100	83.848	Mastacembelus_armatus
ENSGAFG00000006578	pus1	100	84.561	ENSMZEG00005017746	pus1	100	84.561	Maylandia_zebra
ENSGAFG00000006578	pus1	77	72.755	ENSMGAG00000001958	PUS1	98	72.755	Meleagris_gallopavo
ENSGAFG00000006578	pus1	83	71.098	ENSMAUG00000001482	Pus1	81	71.098	Mesocricetus_auratus
ENSGAFG00000006578	pus1	88	67.391	ENSMICG00000030980	PUS1	90	67.391	Microcebus_murinus
ENSGAFG00000006578	pus1	90	66.845	ENSMOCG00000022311	Pus1	87	66.845	Microtus_ochrogaster
ENSGAFG00000006578	pus1	93	78.663	ENSMMOG00000021022	pus1	99	78.663	Mola_mola
ENSGAFG00000006578	pus1	82	69.388	ENSMODG00000015551	PUS1	82	67.213	Monodelphis_domestica
ENSGAFG00000006578	pus1	99	80.952	ENSMALG00000013202	pus1	99	80.952	Monopterus_albus
ENSGAFG00000006578	pus1	88	68.120	MGP_CAROLIEiJ_G0027551	Pus1	93	68.120	Mus_caroli
ENSGAFG00000006578	pus1	88	68.120	ENSMUSG00000029507	Pus1	93	68.120	Mus_musculus
ENSGAFG00000006578	pus1	87	68.681	MGP_PahariEiJ_G0024133	Pus1	92	68.681	Mus_pahari
ENSGAFG00000006578	pus1	88	68.120	MGP_SPRETEiJ_G0028549	Pus1	93	68.120	Mus_spretus
ENSGAFG00000006578	pus1	84	69.341	ENSMPUG00000002314	PUS1	88	69.341	Mustela_putorius_furo
ENSGAFG00000006578	pus1	87	66.298	ENSMLUG00000015790	PUS1	99	66.298	Myotis_lucifugus
ENSGAFG00000006578	pus1	86	68.889	ENSNGAG00000012976	Pus1	86	67.575	Nannospalax_galili
ENSGAFG00000006578	pus1	93	86.957	ENSNBRG00000020502	pus1	99	88.235	Neolamprologus_brichardi
ENSGAFG00000006578	pus1	88	65.668	ENSNLEG00000008505	PUS1	99	69.841	Nomascus_leucogenys
ENSGAFG00000006578	pus1	82	63.081	ENSMEUG00000002825	PUS1	92	63.081	Notamacropus_eugenii
ENSGAFG00000006578	pus1	83	60.519	ENSOPRG00000002701	-	91	60.519	Ochotona_princeps
ENSGAFG00000006578	pus1	83	69.653	ENSODEG00000008248	PUS1	91	69.653	Octodon_degus
ENSGAFG00000006578	pus1	94	85.390	ENSONIG00000003803	pus1	100	85.390	Oreochromis_niloticus
ENSGAFG00000006578	pus1	79	30.137	ENSOANG00000000406	PUS3	69	30.137	Ornithorhynchus_anatinus
ENSGAFG00000006578	pus1	87	67.209	ENSOANG00000010619	PUS1	86	66.313	Ornithorhynchus_anatinus
ENSGAFG00000006578	pus1	86	68.245	ENSOCUG00000007310	PUS1	78	67.769	Oryctolagus_cuniculus
ENSGAFG00000006578	pus1	100	80.714	ENSORLG00000010787	pus1	100	80.714	Oryzias_latipes
ENSGAFG00000006578	pus1	100	80.952	ENSORLG00020011483	pus1	100	80.952	Oryzias_latipes_hni
ENSGAFG00000006578	pus1	100	80.952	ENSORLG00015023012	pus1	99	83.505	Oryzias_latipes_hsok
ENSGAFG00000006578	pus1	98	80.685	ENSOMEG00000022655	pus1	96	80.685	Oryzias_melastigma
ENSGAFG00000006578	pus1	82	70.554	ENSOGAG00000008720	PUS1	96	67.385	Otolemur_garnettii
ENSGAFG00000006578	pus1	96	62.283	ENSOARG00000013316	PUS1	92	62.283	Ovis_aries
ENSGAFG00000006578	pus1	89	67.742	ENSPPAG00000040971	PUS1	87	70.245	Pan_paniscus
ENSGAFG00000006578	pus1	83	69.075	ENSPPRG00000015456	PUS1	87	69.075	Panthera_pardus
ENSGAFG00000006578	pus1	82	69.096	ENSPTIG00000004201	PUS1	90	69.075	Panthera_tigris_altaica
ENSGAFG00000006578	pus1	89	68.011	ENSPTRG00000005643	PUS1	87	70.552	Pan_troglodytes
ENSGAFG00000006578	pus1	93	64.948	ENSPANG00000000376	PUS1	89	69.632	Papio_anubis
ENSGAFG00000006578	pus1	91	67.539	ENSPKIG00000019369	pus1	88	66.838	Paramormyrops_kingsleyae
ENSGAFG00000006578	pus1	97	63.325	ENSPSIG00000016432	PUS1	96	63.350	Pelodiscus_sinensis
ENSGAFG00000006578	pus1	88	80.654	ENSPMGG00000004522	pus1	95	80.654	Periophthalmus_magnuspinnatus
ENSGAFG00000006578	pus1	88	67.847	ENSPEMG00000013448	Pus1	86	67.847	Peromyscus_maniculatus_bairdii
ENSGAFG00000006578	pus1	79	60.182	ENSPMAG00000004636	pus1	99	60.182	Petromyzon_marinus
ENSGAFG00000006578	pus1	70	63.014	ENSPCIG00000022609	-	75	59.365	Phascolarctos_cinereus
ENSGAFG00000006578	pus1	100	96.163	ENSPFOG00000019669	pus1	100	96.163	Poecilia_formosa
ENSGAFG00000006578	pus1	100	95.923	ENSPLAG00000007185	pus1	100	95.923	Poecilia_latipinna
ENSGAFG00000006578	pus1	100	95.923	ENSPLAG00000002692	-	100	95.923	Poecilia_latipinna
ENSGAFG00000006578	pus1	98	96.069	ENSPMEG00000006038	pus1	99	96.069	Poecilia_mexicana
ENSGAFG00000006578	pus1	100	95.923	ENSPMEG00000011115	PUS1	100	95.923	Poecilia_mexicana
ENSGAFG00000006578	pus1	95	95.960	ENSPREG00000007231	pus1	99	95.929	Poecilia_reticulata
ENSGAFG00000006578	pus1	89	67.473	ENSPPYG00000005132	PUS1	87	67.473	Pongo_abelii
ENSGAFG00000006578	pus1	64	66.917	ENSPCAG00000009110	-	65	66.917	Procavia_capensis
ENSGAFG00000006578	pus1	76	66.458	ENSPCOG00000015595	PUS1	91	60.541	Propithecus_coquereli
ENSGAFG00000006578	pus1	100	84.561	ENSPNYG00000013571	pus1	100	84.561	Pundamilia_nyererei
ENSGAFG00000006578	pus1	93	73.779	ENSPNAG00000003938	pus1	90	73.779	Pygocentrus_nattereri
ENSGAFG00000006578	pus1	88	67.575	ENSRNOG00000037500	Pus1	86	67.575	Rattus_norvegicus
ENSGAFG00000006578	pus1	88	67.575	ENSRBIG00000043177	PUS1	90	69.939	Rhinopithecus_bieti
ENSGAFG00000006578	pus1	89	67.838	ENSRROG00000039744	PUS1	88	69.536	Rhinopithecus_roxellana
ENSGAFG00000006578	pus1	77	42.667	YPL212C	-	65	39.459	Saccharomyces_cerevisiae
ENSGAFG00000006578	pus1	88	66.486	ENSSBOG00000023593	PUS1	93	68.405	Saimiri_boliviensis_boliviensis
ENSGAFG00000006578	pus1	87	67.033	ENSSHAG00000013193	PUS1	86	67.033	Sarcophilus_harrisii
ENSGAFG00000006578	pus1	93	68.766	ENSSFOG00015003463	pus1	93	67.482	Scleropages_formosus
ENSGAFG00000006578	pus1	100	80.760	ENSSMAG00000019075	pus1	100	80.760	Scophthalmus_maximus
ENSGAFG00000006578	pus1	100	83.373	ENSSDUG00000007102	pus1	100	83.373	Seriola_dumerili
ENSGAFG00000006578	pus1	100	82.898	ENSSLDG00000022850	pus1	100	82.898	Seriola_lalandi_dorsalis
ENSGAFG00000006578	pus1	72	63.576	ENSSARG00000008367	PUS1	98	63.366	Sorex_araneus
ENSGAFG00000006578	pus1	89	68.533	ENSSPUG00000010009	PUS1	93	68.533	Sphenodon_punctatus
ENSGAFG00000006578	pus1	93	83.887	ENSSPAG00000006272	pus1	99	83.887	Stegastes_partitus
ENSGAFG00000006578	pus1	88	67.027	ENSSSCG00000009741	PUS1	92	67.027	Sus_scrofa
ENSGAFG00000006578	pus1	79	73.333	ENSTGUG00000008068	PUS1	99	73.333	Taeniopygia_guttata
ENSGAFG00000006578	pus1	86	79.778	ENSTRUG00000002198	pus1	92	79.775	Takifugu_rubripes
ENSGAFG00000006578	pus1	93	73.146	ENSTNIG00000003942	pus1	98	73.657	Tetraodon_nigroviridis
ENSGAFG00000006578	pus1	89	65.591	ENSTTRG00000000632	PUS1	87	65.591	Tursiops_truncatus
ENSGAFG00000006578	pus1	83	69.653	ENSUAMG00000017197	PUS1	87	69.653	Ursus_americanus
ENSGAFG00000006578	pus1	83	69.855	ENSUMAG00000002831	PUS1	94	73.248	Ursus_maritimus
ENSGAFG00000006578	pus1	83	70.317	ENSVVUG00000004199	PUS1	79	70.317	Vulpes_vulpes
ENSGAFG00000006578	pus1	64	30.479	ENSXETG00000024532	pus3	50	31.136	Xenopus_tropicalis
ENSGAFG00000006578	pus1	91	65.435	ENSXETG00000002030	pus1	94	65.435	Xenopus_tropicalis
ENSGAFG00000006578	pus1	76	48.916	ENSXETG00000033640	-	99	48.916	Xenopus_tropicalis
ENSGAFG00000006578	pus1	95	98.485	ENSXCOG00000004722	pus1	98	98.485	Xiphophorus_couchianus
ENSGAFG00000006578	pus1	100	97.602	ENSXMAG00000000988	pus1	100	97.602	Xiphophorus_maculatus