EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000006600 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: KIAA0316|PDZD10|PDZK10
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 66447 bases
Position: chrNHOQ01000199.1:2574297-2640743
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009758	Tudor-knot	PF11717.8	1.9e-05	1	1
ENSGAFP00000009747	Tudor-knot	PF11717.8	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009852	-	8573	-	ENSGAFP00000009747	2471 (aa)	-	-
ENSGAFT00000009826	-	8501	-	ENSGAFP00000009721	2411 (aa)	-	-
ENSGAFT00000009863	-	1419	-	ENSGAFP00000009758	472 (aa)	-	-
ENSGAFT00000009804	-	9431	-	ENSGAFP00000009699	2439 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000006600	-	78	32.381	ENSGAFG00000004804	-	96	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006600	-	95	96.183	ENSCSEG00000011268	-	98	87.259	Cynoglossus_semilaevis
ENSGAFG00000006600	-	100	88.825	ENSKMAG00000018641	-	97	89.017	Kryptolebias_marmoratus
ENSGAFG00000006600	-	88	95.918	ENSSDUG00000011764	-	99	90.899	Seriola_dumerili