EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006706 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 56709 bases
Position: chrNHOQ01002408.1:2110902-2167610
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000009881	SRRM_C	PF15230.6	3.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000009986	-	1350	-	ENSGAFP00000009881	449 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006706	srrm4	99	57.609	ENSATEG00000005330	srrm4	99	55.292	Anabas_testudineus
ENSGAFG00000006706	srrm4	73	61.290	ENSACLG00000023532	srrm4	98	57.353	Astatotilapia_calliptera
ENSGAFG00000006706	srrm4	96	46.507	ENSCSEG00000007689	-	81	78.218	Cynoglossus_semilaevis
ENSGAFG00000006706	srrm4	73	71.687	ENSFHEG00000005091	srrm4	100	65.885	Fundulus_heteroclitus
ENSGAFG00000006706	srrm4	80	91.667	ENSHBUG00000010505	srrm4	62	91.667	Haplochromis_burtoni
ENSGAFG00000006706	srrm4	99	58.280	ENSMAMG00000004280	srrm4	80	90.000	Mastacembelus_armatus
ENSGAFG00000006706	srrm4	73	61.290	ENSMZEG00005021733	srrm4	98	57.353	Maylandia_zebra
ENSGAFG00000006706	srrm4	71	61.514	ENSMMOG00000000228	srrm4	99	57.837	Mola_mola
ENSGAFG00000006706	srrm4	80	93.939	ENSNBRG00000015313	srrm4	98	55.297	Neolamprologus_brichardi
ENSGAFG00000006706	srrm4	72	59.557	ENSONIG00000010552	srrm4	63	91.667	Oreochromis_niloticus
ENSGAFG00000006706	srrm4	99	45.595	ENSPMGG00000008387	srrm4	62	84.615	Periophthalmus_magnuspinnatus
ENSGAFG00000006706	srrm4	75	76.393	ENSPFOG00000014600	srrm4	100	74.177	Poecilia_formosa
ENSGAFG00000006706	srrm4	99	80.879	ENSPLAG00000002006	srrm4	99	80.837	Poecilia_latipinna
ENSGAFG00000006706	srrm4	99	84.009	ENSPMEG00000017802	srrm4	99	84.009	Poecilia_mexicana
ENSGAFG00000006706	srrm4	99	79.912	ENSPREG00000004567	srrm4	99	79.912	Poecilia_reticulata
ENSGAFG00000006706	srrm4	98	55.381	ENSPNYG00000007785	srrm4	98	58.057	Pundamilia_nyererei
ENSGAFG00000006706	srrm4	99	61.587	ENSSDUG00000017519	srrm4	99	61.310	Seriola_dumerili
ENSGAFG00000006706	srrm4	81	97.222	ENSSLDG00000015130	srrm4	97	60.085	Seriola_lalandi_dorsalis
ENSGAFG00000006706	srrm4	95	82.927	ENSSPAG00000016190	srrm4	84	94.444	Stegastes_partitus
ENSGAFG00000006706	srrm4	80	97.222	ENSXMAG00000002658	srrm4	61	97.222	Xiphophorus_maculatus