EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000006871 (Gene tree)
Gene ID: -
Gene Symbol: zc3h12b
Alias: si:dkey-286f3.6
Full Name: zinc finger CCCH-type containing 12B
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 18076 bases
Position: chrNHOQ01001678.1:4511369-4529444
Accession: ZDB-GENE-060526-290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010121	RNase_Zc3h12a	PF11977.8	5.1e-66	1	1
ENSGAFP00000010123	RNase_Zc3h12a	PF11977.8	5.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000010227	-	3232	-	ENSGAFP00000010121	857 (aa)	-	UPI000DD25EA5
ENSGAFT00000010229	-	3242	-	ENSGAFP00000010123	857 (aa)	-	UPI000DD25EA5

Gene Model

Click here to download ENSGAFG00000006871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000006871	zc3h12b	56	75.166	ENSGAFG00000004701	-	57	74.834

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006871	zc3h12b	99	66.166	ENSG00000102053	ZC3H12B	91	69.975	Homo_sapiens
ENSGAFG00000006871	zc3h12b	100	91.715	ENSAPOG00000001738	zc3h12b	100	91.715	Acanthochromis_polyacanthus
ENSGAFG00000006871	zc3h12b	74	71.698	ENSAMEG00000006955	ZC3H12B	99	71.698	Ailuropoda_melanoleuca
ENSGAFG00000006871	zc3h12b	100	90.909	ENSACIG00000009787	zc3h12b	100	91.794	Amphilophus_citrinellus
ENSGAFG00000006871	zc3h12b	100	91.949	ENSAOCG00000010094	zc3h12b	100	91.949	Amphiprion_ocellaris
ENSGAFG00000006871	zc3h12b	100	91.832	ENSAPEG00000007479	zc3h12b	100	91.832	Amphiprion_percula
ENSGAFG00000006871	zc3h12b	100	90.559	ENSATEG00000011175	zc3h12b	100	90.326	Anabas_testudineus
ENSGAFG00000006871	zc3h12b	99	69.884	ENSACAG00000013582	ZC3H12B	99	70.233	Anolis_carolinensis
ENSGAFG00000006871	zc3h12b	99	65.708	ENSANAG00000010296	ZC3H12B	91	69.975	Aotus_nancymaae
ENSGAFG00000006871	zc3h12b	100	91.259	ENSACLG00000007669	zc3h12b	100	91.259	Astatotilapia_calliptera
ENSGAFG00000006871	zc3h12b	89	50.694	ENSAMXG00000005320	-	87	46.879	Astyanax_mexicanus
ENSGAFG00000006871	zc3h12b	83	50.366	ENSAMXG00000038308	-	86	45.281	Astyanax_mexicanus
ENSGAFG00000006871	zc3h12b	92	75.904	ENSAMXG00000011328	zc3h12b	81	76.053	Astyanax_mexicanus
ENSGAFG00000006871	zc3h12b	100	66.049	ENSBTAG00000002206	ZC3H12B	93	69.039	Bos_taurus
ENSGAFG00000006871	zc3h12b	99	65.933	ENSCJAG00000001427	ZC3H12B	91	69.720	Callithrix_jacchus
ENSGAFG00000006871	zc3h12b	99	65.197	ENSCAFG00000031307	ZC3H12B	99	64.808	Canis_familiaris
ENSGAFG00000006871	zc3h12b	99	65.197	ENSCAFG00020017995	ZC3H12B	99	64.808	Canis_lupus_dingo
ENSGAFG00000006871	zc3h12b	69	71.066	ENSCHIG00000011723	ZC3H12B	98	71.066	Capra_hircus
ENSGAFG00000006871	zc3h12b	99	66.473	ENSTSYG00000011302	ZC3H12B	92	69.462	Carlito_syrichta
ENSGAFG00000006871	zc3h12b	71	66.504	ENSCAPG00000000650	ZC3H12B	100	66.504	Cavia_aperea
ENSGAFG00000006871	zc3h12b	99	65.593	ENSCCAG00000030171	ZC3H12B	91	69.847	Cebus_capucinus
ENSGAFG00000006871	zc3h12b	99	66.282	ENSCATG00000044845	ZC3H12B	91	70.102	Cercocebus_atys
ENSGAFG00000006871	zc3h12b	99	66.125	ENSCLAG00000003600	ZC3H12B	93	69.086	Chinchilla_lanigera
ENSGAFG00000006871	zc3h12b	99	71.545	ENSCPBG00000006983	ZC3H12B	99	71.744	Chrysemys_picta_bellii
ENSGAFG00000006871	zc3h12b	99	66.166	ENSCANG00000006746	ZC3H12B	91	69.975	Colobus_angolensis_palliatus
ENSGAFG00000006871	zc3h12b	99	65.899	ENSCGRG00001018643	Zc3h12b	91	69.289	Cricetulus_griseus_chok1gshd
ENSGAFG00000006871	zc3h12b	99	65.899	ENSCGRG00000015623	Zc3h12b	91	69.289	Cricetulus_griseus_crigri
ENSGAFG00000006871	zc3h12b	99	86.895	ENSCSEG00000013686	zc3h12b	100	86.659	Cynoglossus_semilaevis
ENSGAFG00000006871	zc3h12b	100	93.248	ENSCVAG00000010473	zc3h12b	100	93.349	Cyprinodon_variegatus
ENSGAFG00000006871	zc3h12b	92	75.244	ENSDARG00000062463	zc3h12b	98	74.879	Danio_rerio
ENSGAFG00000006871	zc3h12b	99	63.023	ENSDNOG00000038439	ZC3H12B	91	66.624	Dasypus_novemcinctus
ENSGAFG00000006871	zc3h12b	99	66.744	ENSDORG00000024832	Zc3h12b	99	66.434	Dipodomys_ordii
ENSGAFG00000006871	zc3h12b	77	64.608	ENSETEG00000012095	ZC3H12B	86	64.608	Echinops_telfairi
ENSGAFG00000006871	zc3h12b	99	62.602	ENSEASG00005006995	ZC3H12B	99	62.602	Equus_asinus_asinus
ENSGAFG00000006871	zc3h12b	99	66.473	ENSECAG00000020993	ZC3H12B	99	66.473	Equus_caballus
ENSGAFG00000006871	zc3h12b	100	83.025	ENSELUG00000010689	zc3h12b	88	81.871	Esox_lucius
ENSGAFG00000006871	zc3h12b	100	65.006	ENSFCAG00000032299	ZC3H12B	93	68.125	Felis_catus
ENSGAFG00000006871	zc3h12b	99	65.893	ENSFDAG00000014258	ZC3H12B	93	68.961	Fukomys_damarensis
ENSGAFG00000006871	zc3h12b	100	93.256	ENSFHEG00000002391	zc3h12b	100	93.256	Fundulus_heteroclitus
ENSGAFG00000006871	zc3h12b	54	76.289	ENSFHEG00000014717	-	76	72.152	Fundulus_heteroclitus
ENSGAFG00000006871	zc3h12b	99	70.650	ENSGALG00000039391	ZC3H12B	99	71.031	Gallus_gallus
ENSGAFG00000006871	zc3h12b	93	90.674	ENSGACG00000020334	zc3h12b	100	91.105	Gasterosteus_aculeatus
ENSGAFG00000006871	zc3h12b	99	71.080	ENSGAGG00000005569	ZC3H12B	99	71.628	Gopherus_agassizii
ENSGAFG00000006871	zc3h12b	99	66.166	ENSGGOG00000024638	ZC3H12B	91	69.975	Gorilla_gorilla
ENSGAFG00000006871	zc3h12b	100	91.026	ENSHBUG00000000645	zc3h12b	100	91.026	Haplochromis_burtoni
ENSGAFG00000006871	zc3h12b	99	65.738	ENSHGLG00000003107	ZC3H12B	93	68.672	Heterocephalus_glaber_female
ENSGAFG00000006871	zc3h12b	99	65.738	ENSHGLG00100010721	ZC3H12B	93	68.672	Heterocephalus_glaber_male
ENSGAFG00000006871	zc3h12b	99	87.603	ENSHCOG00000008487	zc3h12b	100	87.367	Hippocampus_comes
ENSGAFG00000006871	zc3h12b	92	75.151	ENSIPUG00000016745	zc3h12b	84	74.850	Ictalurus_punctatus
ENSGAFG00000006871	zc3h12b	89	47.754	ENSIPUG00000014830	-	87	48.050	Ictalurus_punctatus
ENSGAFG00000006871	zc3h12b	99	66.589	ENSSTOG00000020962	ZC3H12B	99	66.628	Ictidomys_tridecemlineatus
ENSGAFG00000006871	zc3h12b	99	64.468	ENSJJAG00000015755	Zc3h12b	93	67.584	Jaculus_jaculus
ENSGAFG00000006871	zc3h12b	100	90.898	ENSKMAG00000004921	zc3h12b	100	91.132	Kryptolebias_marmoratus
ENSGAFG00000006871	zc3h12b	100	91.036	ENSLBEG00000006448	zc3h12b	100	91.036	Labrus_bergylta
ENSGAFG00000006871	zc3h12b	99	71.545	ENSLACG00000014526	ZC3H12B	99	72.009	Latimeria_chalumnae
ENSGAFG00000006871	zc3h12b	94	52.019	ENSLOCG00000010717	-	86	52.970	Lepisosteus_oculatus
ENSGAFG00000006871	zc3h12b	99	77.480	ENSLOCG00000014631	zc3h12b	87	77.480	Lepisosteus_oculatus
ENSGAFG00000006871	zc3h12b	99	64.965	ENSLAFG00000014891	ZC3H12B	91	68.830	Loxodonta_africana
ENSGAFG00000006871	zc3h12b	99	65.596	ENSMFAG00000042237	ZC3H12B	91	69.318	Macaca_fascicularis
ENSGAFG00000006871	zc3h12b	99	66.166	ENSMMUG00000012261	ZC3H12B	91	69.975	Macaca_mulatta
ENSGAFG00000006871	zc3h12b	99	66.166	ENSMNEG00000043003	ZC3H12B	91	69.975	Macaca_nemestrina
ENSGAFG00000006871	zc3h12b	99	66.282	ENSMLEG00000042630	ZC3H12B	91	70.102	Mandrillus_leucophaeus
ENSGAFG00000006871	zc3h12b	100	90.443	ENSMAMG00000011770	zc3h12b	100	90.210	Mastacembelus_armatus
ENSGAFG00000006871	zc3h12b	100	91.259	ENSMZEG00005007548	zc3h12b	100	91.259	Maylandia_zebra
ENSGAFG00000006871	zc3h12b	99	71.246	ENSMGAG00000000759	ZC3H12B	99	71.562	Meleagris_gallopavo
ENSGAFG00000006871	zc3h12b	99	66.129	ENSMAUG00000017800	Zc3h12b	99	65.313	Mesocricetus_auratus
ENSGAFG00000006871	zc3h12b	99	66.821	ENSMICG00000010697	ZC3H12B	92	69.587	Microcebus_murinus
ENSGAFG00000006871	zc3h12b	99	65.442	ENSMOCG00000000094	Zc3h12b	93	68.525	Microtus_ochrogaster
ENSGAFG00000006871	zc3h12b	99	87.967	ENSMMOG00000008734	zc3h12b	99	87.967	Mola_mola
ENSGAFG00000006871	zc3h12b	99	67.093	ENSMODG00000005206	ZC3H12B	93	70.038	Monodelphis_domestica
ENSGAFG00000006871	zc3h12b	57	72.204	ENSMALG00000016807	-	85	57.143	Monopterus_albus
ENSGAFG00000006871	zc3h12b	100	84.527	ENSMALG00000021153	zc3h12b	100	83.949	Monopterus_albus
ENSGAFG00000006871	zc3h12b	99	65.278	ENSMUSG00000035045	Zc3h12b	99	64.884	Mus_musculus
ENSGAFG00000006871	zc3h12b	99	64.672	MGP_PahariEiJ_G0031787	Zc3h12b	91	69.338	Mus_pahari
ENSGAFG00000006871	zc3h12b	99	65.278	MGP_SPRETEiJ_G0034413	Zc3h12b	99	64.884	Mus_spretus
ENSGAFG00000006871	zc3h12b	99	64.925	ENSMPUG00000001162	ZC3H12B	99	64.576	Mustela_putorius_furo
ENSGAFG00000006871	zc3h12b	99	66.317	ENSMLUG00000013635	ZC3H12B	94	69.847	Myotis_lucifugus
ENSGAFG00000006871	zc3h12b	100	91.142	ENSNBRG00000014889	zc3h12b	100	91.142	Neolamprologus_brichardi
ENSGAFG00000006871	zc3h12b	99	66.397	ENSNLEG00000000383	ZC3H12B	91	70.102	Nomascus_leucogenys
ENSGAFG00000006871	zc3h12b	88	72.083	ENSMEUG00000014075	ZC3H12B	88	72.083	Notamacropus_eugenii
ENSGAFG00000006871	zc3h12b	99	90.187	ENSONIG00000012867	zc3h12b	100	90.070	Oreochromis_niloticus
ENSGAFG00000006871	zc3h12b	70	57.143	ENSOANG00000008267	-	100	56.979	Ornithorhynchus_anatinus
ENSGAFG00000006871	zc3h12b	99	66.357	ENSOCUG00000006130	ZC3H12B	93	68.905	Oryctolagus_cuniculus
ENSGAFG00000006871	zc3h12b	100	89.732	ENSORLG00000009556	zc3h12b	100	89.848	Oryzias_latipes
ENSGAFG00000006871	zc3h12b	53	72.930	ENSORLG00000009188	-	64	69.741	Oryzias_latipes
ENSGAFG00000006871	zc3h12b	100	89.615	ENSORLG00020021793	zc3h12b	100	89.732	Oryzias_latipes_hni
ENSGAFG00000006871	zc3h12b	59	71.340	ENSORLG00020019033	-	82	70.690	Oryzias_latipes_hni
ENSGAFG00000006871	zc3h12b	100	89.848	ENSORLG00015004818	zc3h12b	100	89.965	Oryzias_latipes_hsok
ENSGAFG00000006871	zc3h12b	60	70.393	ENSORLG00015020619	-	87	70.259	Oryzias_latipes_hsok
ENSGAFG00000006871	zc3h12b	100	89.615	ENSOMEG00000005768	zc3h12b	100	89.615	Oryzias_melastigma
ENSGAFG00000006871	zc3h12b	61	71.515	ENSOMEG00000018642	-	72	72.050	Oryzias_melastigma
ENSGAFG00000006871	zc3h12b	99	66.241	ENSOGAG00000029439	ZC3H12B	91	69.975	Otolemur_garnettii
ENSGAFG00000006871	zc3h12b	99	66.009	ENSOARG00000004959	ZC3H12B	93	69.125	Ovis_aries
ENSGAFG00000006871	zc3h12b	99	66.166	ENSPPAG00000039530	ZC3H12B	91	69.975	Pan_paniscus
ENSGAFG00000006871	zc3h12b	74	70.983	ENSPPRG00000004966	-	95	70.983	Panthera_pardus
ENSGAFG00000006871	zc3h12b	74	71.496	ENSPTIG00000005571	ZC3H12B	99	71.496	Panthera_tigris_altaica
ENSGAFG00000006871	zc3h12b	99	66.166	ENSPTRG00000021969	ZC3H12B	91	69.975	Pan_troglodytes
ENSGAFG00000006871	zc3h12b	99	66.282	ENSPANG00000007944	ZC3H12B	91	70.102	Papio_anubis
ENSGAFG00000006871	zc3h12b	99	76.212	ENSPKIG00000019893	ZC3H12B	99	76.212	Paramormyrops_kingsleyae
ENSGAFG00000006871	zc3h12b	85	46.214	ENSPKIG00000012595	-	80	47.167	Paramormyrops_kingsleyae
ENSGAFG00000006871	zc3h12b	92	75.597	ENSPKIG00000012946	zc3h12b	94	75.597	Paramormyrops_kingsleyae
ENSGAFG00000006871	zc3h12b	99	71.462	ENSPSIG00000016853	ZC3H12B	99	71.395	Pelodiscus_sinensis
ENSGAFG00000006871	zc3h12b	100	85.565	ENSPMGG00000006009	zc3h12b	100	85.565	Periophthalmus_magnuspinnatus
ENSGAFG00000006871	zc3h12b	99	65.358	ENSPCIG00000020264	ZC3H12B	92	68.734	Phascolarctos_cinereus
ENSGAFG00000006871	zc3h12b	100	98.133	ENSPFOG00000019365	zc3h12b	100	98.133	Poecilia_formosa
ENSGAFG00000006871	zc3h12b	99	97.079	ENSPLAG00000011981	zc3h12b	100	95.221	Poecilia_latipinna
ENSGAFG00000006871	zc3h12b	100	94.516	ENSPMEG00000002552	zc3h12b	100	94.516	Poecilia_mexicana
ENSGAFG00000006871	zc3h12b	100	97.783	ENSPREG00000020794	zc3h12b	100	97.783	Poecilia_reticulata
ENSGAFG00000006871	zc3h12b	89	72.239	ENSPPYG00000020416	ZC3H12B	86	72.239	Pongo_abelii
ENSGAFG00000006871	zc3h12b	89	68.806	ENSPCAG00000016422	ZC3H12B	86	68.806	Procavia_capensis
ENSGAFG00000006871	zc3h12b	99	67.053	ENSPCOG00000020467	ZC3H12B	92	69.962	Propithecus_coquereli
ENSGAFG00000006871	zc3h12b	89	65.723	ENSPVAG00000017352	ZC3H12B	86	65.723	Pteropus_vampyrus
ENSGAFG00000006871	zc3h12b	100	91.026	ENSPNYG00000018012	zc3h12b	100	91.026	Pundamilia_nyererei
ENSGAFG00000006871	zc3h12b	92	76.658	ENSPNAG00000002567	zc3h12b	92	76.810	Pygocentrus_nattereri
ENSGAFG00000006871	zc3h12b	63	56.752	ENSPNAG00000017483	-	87	49.059	Pygocentrus_nattereri
ENSGAFG00000006871	zc3h12b	99	64.672	ENSRNOG00000011508	Zc3h12b	91	69.338	Rattus_norvegicus
ENSGAFG00000006871	zc3h12b	99	66.282	ENSRBIG00000036402	ZC3H12B	91	70.102	Rhinopithecus_bieti
ENSGAFG00000006871	zc3h12b	99	66.166	ENSRROG00000036004	ZC3H12B	91	69.975	Rhinopithecus_roxellana
ENSGAFG00000006871	zc3h12b	99	65.708	ENSSBOG00000004095	ZC3H12B	91	69.975	Saimiri_boliviensis_boliviensis
ENSGAFG00000006871	zc3h12b	99	65.297	ENSSHAG00000006530	ZC3H12B	99	65.553	Sarcophilus_harrisii
ENSGAFG00000006871	zc3h12b	99	75.701	ENSSFOG00015008769	zc3h12b	99	77.130	Scleropages_formosus
ENSGAFG00000006871	zc3h12b	99	75.087	ENSSFOG00015012866	ZC3H12B	98	75.202	Scleropages_formosus
ENSGAFG00000006871	zc3h12b	100	90.803	ENSSMAG00000018309	zc3h12b	100	90.803	Scophthalmus_maximus
ENSGAFG00000006871	zc3h12b	99	92.380	ENSSDUG00000014078	zc3h12b	100	92.145	Seriola_dumerili
ENSGAFG00000006871	zc3h12b	100	92.308	ENSSLDG00000018895	zc3h12b	100	92.075	Seriola_lalandi_dorsalis
ENSGAFG00000006871	zc3h12b	77	58.045	ENSSARG00000002292	ZC3H12B	86	58.045	Sorex_araneus
ENSGAFG00000006871	zc3h12b	91	70.498	ENSSPUG00000014175	ZC3H12B	95	70.754	Sphenodon_punctatus
ENSGAFG00000006871	zc3h12b	100	91.949	ENSSPAG00000022460	zc3h12b	100	91.949	Stegastes_partitus
ENSGAFG00000006871	zc3h12b	99	66.357	ENSSSCG00000012367	ZC3H12B	93	69.750	Sus_scrofa
ENSGAFG00000006871	zc3h12b	99	70.698	ENSTGUG00000002846	ZC3H12B	99	70.383	Taeniopygia_guttata
ENSGAFG00000006871	zc3h12b	95	84.878	ENSTRUG00000012186	zc3h12b	98	86.558	Takifugu_rubripes
ENSGAFG00000006871	zc3h12b	91	90.247	ENSTNIG00000011828	zc3h12b	94	90.247	Tetraodon_nigroviridis
ENSGAFG00000006871	zc3h12b	73	70.080	ENSTBEG00000011540	ZC3H12B	86	70.080	Tupaia_belangeri
ENSGAFG00000006871	zc3h12b	79	81.250	ENSTTRG00000007468	ZC3H12B	76	81.250	Tursiops_truncatus
ENSGAFG00000006871	zc3h12b	99	65.006	ENSUAMG00000005098	ZC3H12B	99	64.849	Ursus_americanus
ENSGAFG00000006871	zc3h12b	99	65.006	ENSUMAG00000017054	ZC3H12B	99	64.849	Ursus_maritimus
ENSGAFG00000006871	zc3h12b	87	69.507	ENSVPAG00000009070	ZC3H12B	92	69.507	Vicugna_pacos
ENSGAFG00000006871	zc3h12b	99	65.313	ENSVVUG00000022686	ZC3H12B	99	64.925	Vulpes_vulpes
ENSGAFG00000006871	zc3h12b	100	65.323	ENSXETG00000017794	zc3h12b	99	64.965	Xenopus_tropicalis
ENSGAFG00000006871	zc3h12b	58	74.194	ENSXCOG00000007996	-	87	69.672	Xiphophorus_couchianus
ENSGAFG00000006871	zc3h12b	99	98.122	ENSXCOG00000006151	zc3h12b	100	98.122	Xiphophorus_couchianus
ENSGAFG00000006871	zc3h12b	100	98.250	ENSXMAG00000018548	zc3h12b	100	98.250	Xiphophorus_maculatus