EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000006974 (Gene tree)
Gene ID: -
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 277657 bases
Position: chrNHOQ01001678.1:4612357-4890013
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010287	RRM_1	PF00076.22	1.9e-26	1	2
ENSGAFP00000010287	RRM_1	PF00076.22	1.9e-26	2	2
ENSGAFP00000010283	RRM_1	PF00076.22	4.4e-26	1	2
ENSGAFP00000010283	RRM_1	PF00076.22	4.4e-26	2	2
ENSGAFP00000010277	RRM_1	PF00076.22	8e-22	1	2
ENSGAFP00000010277	RRM_1	PF00076.22	8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000010394	-	991	-	ENSGAFP00000010287	197 (aa)	-	-
ENSGAFT00000010384	-	921	-	ENSGAFP00000010277	306 (aa)	-	-
ENSGAFT00000010390	-	901	-	ENSGAFP00000010283	167 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000006974	msi2a	78	83.846	ENSGAFG00000021522	MSI1	89	61.661
ENSGAFG00000006974	msi2a	69	30.172	ENSGAFG00000019301	-	67	30.172
ENSGAFG00000006974	msi2a	90	48.077	ENSGAFG00000011265	-	64	48.077
ENSGAFG00000006974	msi2a	90	46.667	ENSGAFG00000003714	hnrnpd	68	46.667
ENSGAFG00000006974	msi2a	78	41.667	ENSGAFG00000004116	HNRNPA3	51	42.105
ENSGAFG00000006974	msi2a	99	54.799	ENSGAFG00000005860	-	96	54.799
ENSGAFG00000006974	msi2a	89	47.333	ENSGAFG00000008331	hnrnpaba	57	47.333
ENSGAFG00000006974	msi2a	78	36.709	ENSGAFG00000016679	-	56	36.709
ENSGAFG00000006974	msi2a	71	46.575	ENSGAFG00000019917	rbmx	61	53.704
ENSGAFG00000006974	msi2a	78	43.182	ENSGAFG00000007751	-	50	43.609
ENSGAFG00000006974	msi2a	82	34.177	ENSGAFG00000016803	-	64	32.883

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006974	msi2a	90	94.040	ENSG00000153944	MSI2	86	96.522	Homo_sapiens
ENSGAFG00000006974	msi2a	95	96.154	ENSAPOG00000001658	msi2a	96	90.164	Acanthochromis_polyacanthus
ENSGAFG00000006974	msi2a	78	96.154	ENSAMEG00000002697	MSI2	96	76.997	Ailuropoda_melanoleuca
ENSGAFG00000006974	msi2a	90	90.066	ENSACIG00000009475	msi2a	79	98.000	Amphilophus_citrinellus
ENSGAFG00000006974	msi2a	93	80.000	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSGAFG00000006974	msi2a	90	100.000	ENSAPEG00000007706	msi2a	96	90.164	Amphiprion_percula
ENSGAFG00000006974	msi2a	96	94.545	ENSATEG00000010498	msi2a	96	90.164	Anabas_testudineus
ENSGAFG00000006974	msi2a	95	83.643	ENSATEG00000003301	-	95	83.643	Anabas_testudineus
ENSGAFG00000006974	msi2a	78	95.604	ENSACAG00000005452	MSI2	66	79.724	Anolis_carolinensis
ENSGAFG00000006974	msi2a	90	94.040	ENSANAG00000037827	MSI2	96	80.251	Aotus_nancymaae
ENSGAFG00000006974	msi2a	90	100.000	ENSACLG00000007752	msi2a	96	90.492	Astatotilapia_calliptera
ENSGAFG00000006974	msi2a	90	96.026	ENSAMXG00000010474	msi2b	96	86.184	Astyanax_mexicanus
ENSGAFG00000006974	msi2a	90	96.026	ENSAMXG00000032796	msi2a	96	81.875	Astyanax_mexicanus
ENSGAFG00000006974	msi2a	90	91.391	ENSBTAG00000004406	MSI2	89	81.633	Bos_taurus
ENSGAFG00000006974	msi2a	80	71.642	WBGene00003423	msi-1	68	71.852	Caenorhabditis_elegans
ENSGAFG00000006974	msi2a	90	94.040	ENSCJAG00000013998	MSI2	96	80.251	Callithrix_jacchus
ENSGAFG00000006974	msi2a	78	95.614	ENSCAFG00020025620	MSI2	78	77.742	Canis_lupus_dingo
ENSGAFG00000006974	msi2a	90	91.391	ENSCHIG00000016580	MSI2	96	79.062	Capra_hircus
ENSGAFG00000006974	msi2a	92	79.121	ENSCPOG00000034042	MSI2	95	78.832	Cavia_porcellus
ENSGAFG00000006974	msi2a	90	94.040	ENSCCAG00000033927	MSI2	96	80.251	Cebus_capucinus
ENSGAFG00000006974	msi2a	84	95.714	ENSCATG00000040879	MSI2	96	79.688	Cercocebus_atys
ENSGAFG00000006974	msi2a	90	94.040	ENSCLAG00000014325	MSI2	87	87.500	Chinchilla_lanigera
ENSGAFG00000006974	msi2a	90	94.040	ENSCSAG00000005633	MSI2	96	80.251	Chlorocebus_sabaeus
ENSGAFG00000006974	msi2a	92	57.597	ENSCHOG00000008660	MSI2	99	57.394	Choloepus_hoffmanni
ENSGAFG00000006974	msi2a	99	78.947	ENSCPBG00000009942	MSI2	90	76.357	Chrysemys_picta_bellii
ENSGAFG00000006974	msi2a	78	82.979	ENSCING00000018579	-	90	43.458	Ciona_intestinalis
ENSGAFG00000006974	msi2a	80	68.310	ENSCSAVG00000010397	-	58	68.531	Ciona_savignyi
ENSGAFG00000006974	msi2a	78	96.154	ENSCANG00000036414	MSI2	95	76.997	Colobus_angolensis_palliatus
ENSGAFG00000006974	msi2a	90	93.377	ENSCGRG00001013330	Msi2	96	79.439	Cricetulus_griseus_chok1gshd
ENSGAFG00000006974	msi2a	78	96.154	ENSCGRG00000003141	Msi2	93	76.752	Cricetulus_griseus_crigri
ENSGAFG00000006974	msi2a	81	97.059	ENSCSEG00000013549	msi2a	77	97.059	Cynoglossus_semilaevis
ENSGAFG00000006974	msi2a	80	64.516	ENSCSEG00000013557	msi2a	77	63.441	Cynoglossus_semilaevis
ENSGAFG00000006974	msi2a	90	90.441	ENSCSEG00000003266	-	96	72.785	Cynoglossus_semilaevis
ENSGAFG00000006974	msi2a	100	90.584	ENSCVAG00000017075	msi2a	100	90.584	Cyprinodon_variegatus
ENSGAFG00000006974	msi2a	99	88.889	ENSDARG00000033901	msi2a	82	88.889	Danio_rerio
ENSGAFG00000006974	msi2a	90	97.351	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSGAFG00000006974	msi2a	92	84.229	ENSDNOG00000014501	MSI2	95	83.929	Dasypus_novemcinctus
ENSGAFG00000006974	msi2a	68	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSGAFG00000006974	msi2a	80	68.085	ENSDORG00000005394	Msi2	79	67.725	Dipodomys_ordii
ENSGAFG00000006974	msi2a	78	82.979	FBgn0260943	Rbp6	88	51.007	Drosophila_melanogaster
ENSGAFG00000006974	msi2a	77	96.667	ENSETEG00000012450	-	64	57.962	Echinops_telfairi
ENSGAFG00000006974	msi2a	91	60.396	ENSEBUG00000006732	msi2a	84	60.396	Eptatretus_burgeri
ENSGAFG00000006974	msi2a	93	84.211	ENSEASG00005002965	MSI2	90	71.217	Equus_asinus_asinus
ENSGAFG00000006974	msi2a	90	94.040	ENSECAG00000011435	MSI2	96	73.699	Equus_caballus
ENSGAFG00000006974	msi2a	89	68.482	ENSEEUG00000007810	MSI2	100	68.217	Erinaceus_europaeus
ENSGAFG00000006974	msi2a	90	96.053	ENSELUG00000001361	msi2b	98	82.424	Esox_lucius
ENSGAFG00000006974	msi2a	90	97.351	ENSELUG00000011747	msi2a	96	87.171	Esox_lucius
ENSGAFG00000006974	msi2a	90	76.821	ENSFCAG00000033787	-	80	76.974	Felis_catus
ENSGAFG00000006974	msi2a	90	94.040	ENSFCAG00000041686	MSI2	92	90.110	Felis_catus
ENSGAFG00000006974	msi2a	78	96.154	ENSFDAG00000016118	MSI2	96	76.997	Fukomys_damarensis
ENSGAFG00000006974	msi2a	96	96.364	ENSFHEG00000000084	msi2a	100	96.835	Fundulus_heteroclitus
ENSGAFG00000006974	msi2a	87	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSGAFG00000006974	msi2a	90	92.715	ENSGALG00000005567	MSI2	96	75.074	Gallus_gallus
ENSGAFG00000006974	msi2a	99	78.947	ENSGAGG00000016542	MSI2	95	76.271	Gopherus_agassizii
ENSGAFG00000006974	msi2a	78	96.154	ENSGGOG00000013182	MSI2	95	76.997	Gorilla_gorilla
ENSGAFG00000006974	msi2a	95	98.077	ENSHBUG00000020800	msi2a	96	90.492	Haplochromis_burtoni
ENSGAFG00000006974	msi2a	87	92.308	ENSHGLG00000012444	MSI2	76	92.308	Heterocephalus_glaber_female
ENSGAFG00000006974	msi2a	76	71.212	ENSHGLG00100003744	MSI2	94	70.854	Heterocephalus_glaber_male
ENSGAFG00000006974	msi2a	68	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSGAFG00000006974	msi2a	98	74.330	ENSHCOG00000017241	-	75	73.946	Hippocampus_comes
ENSGAFG00000006974	msi2a	90	99.338	ENSHCOG00000000266	msi2a	82	94.231	Hippocampus_comes
ENSGAFG00000006974	msi2a	90	94.040	ENSIPUG00000021097	msi2a	96	84.539	Ictalurus_punctatus
ENSGAFG00000006974	msi2a	90	96.026	ENSIPUG00000003732	msi2b	95	81.908	Ictalurus_punctatus
ENSGAFG00000006974	msi2a	92	79.121	ENSSTOG00000007884	MSI2	95	78.832	Ictidomys_tridecemlineatus
ENSGAFG00000006974	msi2a	76	65.263	ENSJJAG00000006292	-	93	64.398	Jaculus_jaculus
ENSGAFG00000006974	msi2a	68	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSGAFG00000006974	msi2a	99	100.000	ENSKMAG00000009494	msi2a	96	85.938	Kryptolebias_marmoratus
ENSGAFG00000006974	msi2a	96	94.545	ENSLBEG00000007061	msi2a	88	100.000	Labrus_bergylta
ENSGAFG00000006974	msi2a	78	86.139	ENSLBEG00000026223	-	96	59.940	Labrus_bergylta
ENSGAFG00000006974	msi2a	78	94.048	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSGAFG00000006974	msi2a	90	97.351	ENSLOCG00000004675	msi2b	100	86.992	Lepisosteus_oculatus
ENSGAFG00000006974	msi2a	78	96.154	ENSMFAG00000003775	MSI2	95	76.997	Macaca_fascicularis
ENSGAFG00000006974	msi2a	78	96.154	ENSMMUG00000002069	MSI2	95	76.997	Macaca_mulatta
ENSGAFG00000006974	msi2a	90	94.040	ENSMNEG00000045275	MSI2	96	80.251	Macaca_nemestrina
ENSGAFG00000006974	msi2a	78	96.154	ENSMLEG00000033888	MSI2	95	76.997	Mandrillus_leucophaeus
ENSGAFG00000006974	msi2a	95	96.154	ENSMAMG00000010503	msi2a	96	89.542	Mastacembelus_armatus
ENSGAFG00000006974	msi2a	91	93.421	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSGAFG00000006974	msi2a	95	98.077	ENSMZEG00005007676	msi2a	96	90.492	Maylandia_zebra
ENSGAFG00000006974	msi2a	90	93.377	ENSMAUG00000003862	Msi2	96	75.221	Mesocricetus_auratus
ENSGAFG00000006974	msi2a	90	94.040	ENSMICG00000013598	-	96	80.251	Microcebus_murinus
ENSGAFG00000006974	msi2a	92	84.106	ENSMICG00000032913	-	95	63.272	Microcebus_murinus
ENSGAFG00000006974	msi2a	90	93.377	ENSMOCG00000005820	Msi2	96	75.444	Microtus_ochrogaster
ENSGAFG00000006974	msi2a	90	90.066	ENSMMOG00000008348	msi2a	95	95.205	Mola_mola
ENSGAFG00000006974	msi2a	76	70.707	ENSMODG00000014790	MSI2	94	70.352	Monodelphis_domestica
ENSGAFG00000006974	msi2a	90	100.000	ENSMALG00000000071	msi2a	90	98.077	Monopterus_albus
ENSGAFG00000006974	msi2a	90	93.377	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSGAFG00000006974	msi2a	90	93.377	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSGAFG00000006974	msi2a	90	93.377	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSGAFG00000006974	msi2a	90	93.377	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSGAFG00000006974	msi2a	97	80.936	ENSMPUG00000015377	MSI2	89	81.973	Mustela_putorius_furo
ENSGAFG00000006974	msi2a	97	80.936	ENSMLUG00000007865	MSI2	89	81.973	Myotis_lucifugus
ENSGAFG00000006974	msi2a	90	93.377	ENSNGAG00000017807	Msi2	96	75.444	Nannospalax_galili
ENSGAFG00000006974	msi2a	90	100.000	ENSNBRG00000014596	msi2a	92	100.000	Neolamprologus_brichardi
ENSGAFG00000006974	msi2a	78	95.833	ENSNLEG00000008059	MSI2	95	82.160	Nomascus_leucogenys
ENSGAFG00000006974	msi2a	77	98.361	ENSOPRG00000000872	-	64	69.872	Ochotona_princeps
ENSGAFG00000006974	msi2a	90	94.040	ENSODEG00000011974	MSI2	96	75.740	Octodon_degus
ENSGAFG00000006974	msi2a	92	99.346	ENSONIG00000001972	msi2a	85	99.346	Oreochromis_niloticus
ENSGAFG00000006974	msi2a	85	91.549	ENSOANG00000005667	MSI2	83	75.439	Ornithorhynchus_anatinus
ENSGAFG00000006974	msi2a	97	80.936	ENSOCUG00000010440	MSI2	89	81.973	Oryctolagus_cuniculus
ENSGAFG00000006974	msi2a	90	100.000	ENSORLG00000009671	msi2a	96	87.869	Oryzias_latipes
ENSGAFG00000006974	msi2a	96	96.364	ENSORLG00020021556	msi2a	96	87.869	Oryzias_latipes_hni
ENSGAFG00000006974	msi2a	90	100.000	ENSORLG00015004592	msi2a	96	87.869	Oryzias_latipes_hsok
ENSGAFG00000006974	msi2a	90	100.000	ENSOMEG00000000146	msi2a	91	89.789	Oryzias_melastigma
ENSGAFG00000006974	msi2a	97	76.254	ENSOGAG00000005621	MSI2	96	76.000	Otolemur_garnettii
ENSGAFG00000006974	msi2a	78	96.154	ENSPPAG00000037697	MSI2	95	76.997	Pan_paniscus
ENSGAFG00000006974	msi2a	95	81.973	ENSPPRG00000001848	MSI2	89	81.973	Panthera_pardus
ENSGAFG00000006974	msi2a	86	71.528	ENSPTIG00000021873	-	90	65.546	Panthera_tigris_altaica
ENSGAFG00000006974	msi2a	78	95.690	ENSPTIG00000021678	MSI2	92	79.139	Panthera_tigris_altaica
ENSGAFG00000006974	msi2a	78	96.154	ENSPTRG00000009437	MSI2	95	76.997	Pan_troglodytes
ENSGAFG00000006974	msi2a	90	94.040	ENSPANG00000022319	MSI2	96	80.251	Papio_anubis
ENSGAFG00000006974	msi2a	68	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSGAFG00000006974	msi2a	90	93.377	ENSPKIG00000007038	-	92	77.019	Paramormyrops_kingsleyae
ENSGAFG00000006974	msi2a	90	96.026	ENSPSIG00000008618	MSI2	78	81.132	Pelodiscus_sinensis
ENSGAFG00000006974	msi2a	99	89.508	ENSPMGG00000005888	msi2a	96	89.508	Periophthalmus_magnuspinnatus
ENSGAFG00000006974	msi2a	68	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSGAFG00000006974	msi2a	90	96.026	ENSPCIG00000006063	MSI2	96	74.277	Phascolarctos_cinereus
ENSGAFG00000006974	msi2a	87	99.048	ENSPFOG00000019337	MSI2	91	99.048	Poecilia_formosa
ENSGAFG00000006974	msi2a	81	100.000	ENSPLAG00000000436	msi2a	72	100.000	Poecilia_latipinna
ENSGAFG00000006974	msi2a	81	88.971	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSGAFG00000006974	msi2a	100	90.260	ENSPREG00000000881	msi2a	96	90.260	Poecilia_reticulata
ENSGAFG00000006974	msi2a	78	98.361	ENSPPYG00000008244	-	94	78.947	Pongo_abelii
ENSGAFG00000006974	msi2a	88	53.275	ENSPCAG00000010552	MSI2	95	53.043	Procavia_capensis
ENSGAFG00000006974	msi2a	78	96.154	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSGAFG00000006974	msi2a	78	95.690	ENSPVAG00000017053	MSI2	95	76.325	Pteropus_vampyrus
ENSGAFG00000006974	msi2a	90	100.000	ENSPNYG00000018393	msi2a	96	90.492	Pundamilia_nyererei
ENSGAFG00000006974	msi2a	90	96.026	ENSPNAG00000000844	msi2b	96	85.902	Pygocentrus_nattereri
ENSGAFG00000006974	msi2a	90	95.364	ENSPNAG00000014957	msi2a	96	86.230	Pygocentrus_nattereri
ENSGAFG00000006974	msi2a	92	83.643	ENSRNOG00000025338	Msi2	95	83.333	Rattus_norvegicus
ENSGAFG00000006974	msi2a	54	73.626	ENSRBIG00000032064	-	82	88.158	Rhinopithecus_bieti
ENSGAFG00000006974	msi2a	78	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSGAFG00000006974	msi2a	78	97.872	ENSSBOG00000026425	MSI2	95	76.997	Saimiri_boliviensis_boliviensis
ENSGAFG00000006974	msi2a	78	96.899	ENSSHAG00000008672	MSI2	95	76.997	Sarcophilus_harrisii
ENSGAFG00000006974	msi2a	95	78.231	ENSSFOG00015021687	-	93	77.891	Scleropages_formosus
ENSGAFG00000006974	msi2a	90	75.817	ENSSFOG00015012168	msi2b	60	74.089	Scleropages_formosus
ENSGAFG00000006974	msi2a	96	96.364	ENSSMAG00000018484	msi2a	96	90.492	Scophthalmus_maximus
ENSGAFG00000006974	msi2a	90	100.000	ENSSDUG00000014507	msi2a	96	90.164	Seriola_dumerili
ENSGAFG00000006974	msi2a	91	94.079	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSGAFG00000006974	msi2a	96	94.545	ENSSLDG00000017172	msi2a	96	90.164	Seriola_lalandi_dorsalis
ENSGAFG00000006974	msi2a	54	79.121	ENSSLDG00000021332	-	68	79.121	Seriola_lalandi_dorsalis
ENSGAFG00000006974	msi2a	90	95.364	ENSSPUG00000000913	-	94	95.364	Sphenodon_punctatus
ENSGAFG00000006974	msi2a	95	96.154	ENSSPAG00000017793	msi2a	82	96.154	Stegastes_partitus
ENSGAFG00000006974	msi2a	90	94.040	ENSSSCG00000038505	MSI2	96	80.251	Sus_scrofa
ENSGAFG00000006974	msi2a	76	71.212	ENSTGUG00000008452	MSI2	94	70.854	Taeniopygia_guttata
ENSGAFG00000006974	msi2a	90	100.000	ENSTRUG00000021248	msi2a	96	83.180	Takifugu_rubripes
ENSGAFG00000006974	msi2a	81	77.778	ENSTBEG00000001241	MSI2	73	64.609	Tupaia_belangeri
ENSGAFG00000006974	msi2a	78	98.361	ENSTTRG00000002189	MSI2	95	73.043	Tursiops_truncatus
ENSGAFG00000006974	msi2a	97	80.936	ENSUAMG00000000700	MSI2	89	81.973	Ursus_americanus
ENSGAFG00000006974	msi2a	78	95.050	ENSUMAG00000000505	MSI2	95	76.208	Ursus_maritimus
ENSGAFG00000006974	msi2a	69	95.690	ENSVPAG00000006837	-	62	79.348	Vicugna_pacos
ENSGAFG00000006974	msi2a	90	95.614	ENSVVUG00000011783	MSI2	82	92.800	Vulpes_vulpes
ENSGAFG00000006974	msi2a	95	100.000	ENSXCOG00000006113	msi2a	85	100.000	Xiphophorus_couchianus
ENSGAFG00000006974	msi2a	100	90.584	ENSXMAG00000000608	msi2a	100	90.584	Xiphophorus_maculatus