EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000006986 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 27676 bases
Position: chrNHOQ01002778.1:1509579-1537254
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010368	DRIM	PF07539.12	3.6e-152	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000010475	-	7773	-	ENSGAFP00000010368	2591 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000006986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000006986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000006986	utp20	99	53.824	ENSG00000120800	UTP20	97	53.945	Homo_sapiens
ENSGAFG00000006986	utp20	100	76.937	ENSAPOG00000002429	utp20	98	76.889	Acanthochromis_polyacanthus
ENSGAFG00000006986	utp20	99	53.891	ENSAMEG00000016416	UTP20	97	53.832	Ailuropoda_melanoleuca
ENSGAFG00000006986	utp20	100	75.974	ENSACIG00000007987	utp20	98	76.440	Amphilophus_citrinellus
ENSGAFG00000006986	utp20	60	78.242	ENSAOCG00000015055	utp20	95	78.144	Amphiprion_ocellaris
ENSGAFG00000006986	utp20	100	77.855	ENSAPEG00000011605	utp20	98	77.721	Amphiprion_percula
ENSGAFG00000006986	utp20	100	78.333	ENSATEG00000005601	utp20	99	78.824	Anabas_testudineus
ENSGAFG00000006986	utp20	99	54.987	ENSAPLG00000015651	UTP20	98	55.150	Anas_platyrhynchos
ENSGAFG00000006986	utp20	99	54.189	ENSACAG00000011671	UTP20	97	54.077	Anolis_carolinensis
ENSGAFG00000006986	utp20	99	53.014	ENSANAG00000027152	UTP20	97	53.097	Aotus_nancymaae
ENSGAFG00000006986	utp20	100	75.442	ENSACLG00000008064	utp20	98	76.198	Astatotilapia_calliptera
ENSGAFG00000006986	utp20	100	63.873	ENSAMXG00000021039	utp20	97	64.001	Astyanax_mexicanus
ENSGAFG00000006986	utp20	99	54.738	ENSBTAG00000003239	UTP20	97	54.619	Bos_taurus
ENSGAFG00000006986	utp20	99	53.994	ENSCJAG00000001913	UTP20	97	53.999	Callithrix_jacchus
ENSGAFG00000006986	utp20	99	54.205	ENSCAFG00000006964	UTP20	97	54.026	Canis_familiaris
ENSGAFG00000006986	utp20	99	54.168	ENSCAFG00020024305	UTP20	97	53.990	Canis_lupus_dingo
ENSGAFG00000006986	utp20	99	54.595	ENSCHIG00000009221	UTP20	97	54.288	Capra_hircus
ENSGAFG00000006986	utp20	99	53.217	ENSTSYG00000003040	UTP20	97	53.417	Carlito_syrichta
ENSGAFG00000006986	utp20	99	50.896	ENSCAPG00000014920	UTP20	98	50.880	Cavia_aperea
ENSGAFG00000006986	utp20	99	52.547	ENSCPOG00000003129	UTP20	97	52.606	Cavia_porcellus
ENSGAFG00000006986	utp20	99	53.818	ENSCCAG00000031422	UTP20	98	53.666	Cebus_capucinus
ENSGAFG00000006986	utp20	99	52.093	ENSCATG00000035636	UTP20	97	51.981	Cercocebus_atys
ENSGAFG00000006986	utp20	99	54.065	ENSCLAG00000011569	UTP20	97	54.115	Chinchilla_lanigera
ENSGAFG00000006986	utp20	99	53.935	ENSCSAG00000003388	UTP20	97	54.100	Chlorocebus_sabaeus
ENSGAFG00000006986	utp20	90	69.697	ENSCHOG00000003532	UTP20	90	69.697	Choloepus_hoffmanni
ENSGAFG00000006986	utp20	95	55.209	ENSCPBG00000004844	UTP20	98	55.267	Chrysemys_picta_bellii
ENSGAFG00000006986	utp20	94	55.218	ENSCANG00000034768	UTP20	95	55.405	Colobus_angolensis_palliatus
ENSGAFG00000006986	utp20	99	53.326	ENSCGRG00001017151	Utp20	97	52.993	Cricetulus_griseus_chok1gshd
ENSGAFG00000006986	utp20	99	53.236	ENSCGRG00000008595	Utp20	97	52.829	Cricetulus_griseus_crigri
ENSGAFG00000006986	utp20	99	76.280	ENSCSEG00000014760	utp20	99	75.955	Cynoglossus_semilaevis
ENSGAFG00000006986	utp20	100	84.300	ENSCVAG00000001727	utp20	98	84.228	Cyprinodon_variegatus
ENSGAFG00000006986	utp20	100	63.412	ENSDARG00000099280	utp20	97	63.616	Danio_rerio
ENSGAFG00000006986	utp20	99	53.631	ENSDNOG00000016845	UTP20	97	53.596	Dasypus_novemcinctus
ENSGAFG00000006986	utp20	100	52.081	ENSDORG00000014762	Utp20	95	57.235	Dipodomys_ordii
ENSGAFG00000006986	utp20	88	71.852	ENSETEG00000019983	UTP20	86	73.810	Echinops_telfairi
ENSGAFG00000006986	utp20	99	53.880	ENSEASG00005019981	UTP20	97	53.891	Equus_asinus_asinus
ENSGAFG00000006986	utp20	99	53.988	ENSECAG00000006876	UTP20	97	54.001	Equus_caballus
ENSGAFG00000006986	utp20	72	62.500	ENSEEUG00000003774	UTP20	75	60.294	Erinaceus_europaeus
ENSGAFG00000006986	utp20	100	67.288	ENSELUG00000000798	utp20	98	66.943	Esox_lucius
ENSGAFG00000006986	utp20	99	53.637	ENSFCAG00000006150	UTP20	97	53.666	Felis_catus
ENSGAFG00000006986	utp20	94	53.471	ENSFALG00000011135	UTP20	98	54.117	Ficedula_albicollis
ENSGAFG00000006986	utp20	99	46.762	ENSFDAG00000007567	UTP20	97	46.681	Fukomys_damarensis
ENSGAFG00000006986	utp20	100	82.504	ENSFHEG00000004142	utp20	99	82.734	Fundulus_heteroclitus
ENSGAFG00000006986	utp20	99	63.650	ENSGMOG00000006762	utp20	97	63.703	Gadus_morhua
ENSGAFG00000006986	utp20	99	54.825	ENSGALG00000011643	UTP20	97	54.907	Gallus_gallus
ENSGAFG00000006986	utp20	99	72.289	ENSGACG00000019092	utp20	97	71.704	Gasterosteus_aculeatus
ENSGAFG00000006986	utp20	69	57.701	ENSGAGG00000011169	UTP20	93	57.492	Gopherus_agassizii
ENSGAFG00000006986	utp20	99	53.297	ENSGGOG00000004904	UTP20	97	53.414	Gorilla_gorilla
ENSGAFG00000006986	utp20	100	75.645	ENSHBUG00000010613	utp20	98	75.852	Haplochromis_burtoni
ENSGAFG00000006986	utp20	99	52.973	ENSHGLG00000006422	UTP20	97	52.788	Heterocephalus_glaber_female
ENSGAFG00000006986	utp20	99	51.865	ENSHGLG00100001086	UTP20	97	51.673	Heterocephalus_glaber_male
ENSGAFG00000006986	utp20	96	74.097	ENSHCOG00000005421	utp20	96	73.813	Hippocampus_comes
ENSGAFG00000006986	utp20	100	63.765	ENSIPUG00000013717	utp20	97	63.373	Ictalurus_punctatus
ENSGAFG00000006986	utp20	99	54.262	ENSSTOG00000015995	UTP20	97	54.206	Ictidomys_tridecemlineatus
ENSGAFG00000006986	utp20	99	53.747	ENSJJAG00000019321	Utp20	97	53.852	Jaculus_jaculus
ENSGAFG00000006986	utp20	100	77.765	ENSKMAG00000005972	utp20	98	77.816	Kryptolebias_marmoratus
ENSGAFG00000006986	utp20	100	78.225	ENSLBEG00000000781	utp20	99	78.352	Labrus_bergylta
ENSGAFG00000006986	utp20	79	57.111	ENSLACG00000010098	UTP20	98	56.922	Latimeria_chalumnae
ENSGAFG00000006986	utp20	91	63.750	ENSLOCG00000015197	utp20	88	76.111	Lepisosteus_oculatus
ENSGAFG00000006986	utp20	99	52.843	ENSLAFG00000012983	UTP20	97	53.122	Loxodonta_africana
ENSGAFG00000006986	utp20	99	53.721	ENSMFAG00000037766	UTP20	97	53.798	Macaca_fascicularis
ENSGAFG00000006986	utp20	99	53.793	ENSMMUG00000012891	UTP20	97	53.872	Macaca_mulatta
ENSGAFG00000006986	utp20	99	52.215	ENSMNEG00000037418	UTP20	97	52.056	Macaca_nemestrina
ENSGAFG00000006986	utp20	99	52.383	ENSMLEG00000029148	UTP20	97	52.365	Mandrillus_leucophaeus
ENSGAFG00000006986	utp20	100	75.347	ENSMAMG00000002063	utp20	98	75.028	Mastacembelus_armatus
ENSGAFG00000006986	utp20	100	77.334	ENSMZEG00005018123	utp20	98	78.015	Maylandia_zebra
ENSGAFG00000006986	utp20	99	54.444	ENSMGAG00000011726	UTP20	97	54.672	Meleagris_gallopavo
ENSGAFG00000006986	utp20	64	52.608	ENSMAUG00000011898	Utp20	99	52.649	Mesocricetus_auratus
ENSGAFG00000006986	utp20	99	51.557	ENSMICG00000015736	UTP20	97	51.685	Microcebus_murinus
ENSGAFG00000006986	utp20	99	53.319	ENSMOCG00000015242	Utp20	97	52.919	Microtus_ochrogaster
ENSGAFG00000006986	utp20	99	71.152	ENSMMOG00000003360	utp20	97	70.665	Mola_mola
ENSGAFG00000006986	utp20	99	53.582	ENSMODG00000003141	UTP20	97	53.891	Monodelphis_domestica
ENSGAFG00000006986	utp20	100	75.896	ENSMALG00000002723	utp20	98	75.361	Monopterus_albus
ENSGAFG00000006986	utp20	99	53.726	MGP_CAROLIEiJ_G0015713	Utp20	97	53.407	Mus_caroli
ENSGAFG00000006986	utp20	99	53.975	ENSMUSG00000004356	Utp20	97	53.424	Mus_musculus
ENSGAFG00000006986	utp20	99	53.673	MGP_PahariEiJ_G0031372	Utp20	97	53.262	Mus_pahari
ENSGAFG00000006986	utp20	99	53.774	MGP_SPRETEiJ_G0016531	Utp20	89	81.250	Mus_spretus
ENSGAFG00000006986	utp20	99	53.910	ENSMPUG00000011641	UTP20	97	53.397	Mustela_putorius_furo
ENSGAFG00000006986	utp20	99	54.186	ENSMLUG00000002313	UTP20	97	54.243	Myotis_lucifugus
ENSGAFG00000006986	utp20	99	53.818	ENSNGAG00000013738	Utp20	97	53.464	Nannospalax_galili
ENSGAFG00000006986	utp20	79	95.455	ENSNBRG00000019464	utp20	95	96.296	Neolamprologus_brichardi
ENSGAFG00000006986	utp20	99	54.129	ENSNLEG00000006166	UTP20	97	54.165	Nomascus_leucogenys
ENSGAFG00000006986	utp20	87	58.537	ENSMEUG00000015457	UTP20	84	58.537	Notamacropus_eugenii
ENSGAFG00000006986	utp20	88	75.159	ENSOPRG00000010546	UTP20	84	75.159	Ochotona_princeps
ENSGAFG00000006986	utp20	99	53.776	ENSODEG00000013411	UTP20	97	53.826	Octodon_degus
ENSGAFG00000006986	utp20	100	76.710	ENSONIG00000009910	utp20	98	77.001	Oreochromis_niloticus
ENSGAFG00000006986	utp20	99	53.796	ENSOANG00000005578	UTP20	97	53.487	Ornithorhynchus_anatinus
ENSGAFG00000006986	utp20	99	53.894	ENSOCUG00000010475	UTP20	97	53.608	Oryctolagus_cuniculus
ENSGAFG00000006986	utp20	99	74.405	ENSORLG00000008900	utp20	99	74.278	Oryzias_latipes
ENSGAFG00000006986	utp20	99	73.774	ENSORLG00020005879	utp20	99	73.616	Oryzias_latipes_hni
ENSGAFG00000006986	utp20	99	74.499	ENSORLG00015002843	utp20	99	74.230	Oryzias_latipes_hsok
ENSGAFG00000006986	utp20	100	76.537	ENSOMEG00000023583	utp20	99	76.734	Oryzias_melastigma
ENSGAFG00000006986	utp20	99	53.590	ENSOGAG00000015130	UTP20	97	53.568	Otolemur_garnettii
ENSGAFG00000006986	utp20	99	54.632	ENSOARG00000014722	UTP20	97	54.596	Ovis_aries
ENSGAFG00000006986	utp20	99	53.824	ENSPPAG00000001381	UTP20	97	53.945	Pan_paniscus
ENSGAFG00000006986	utp20	99	53.788	ENSPPRG00000001026	UTP20	97	53.739	Panthera_pardus
ENSGAFG00000006986	utp20	99	53.751	ENSPTIG00000020972	UTP20	97	53.702	Panthera_tigris_altaica
ENSGAFG00000006986	utp20	99	53.860	ENSPTRG00000005349	UTP20	97	53.982	Pan_troglodytes
ENSGAFG00000006986	utp20	99	53.969	ENSPANG00000020388	UTP20	97	53.615	Papio_anubis
ENSGAFG00000006986	utp20	100	62.314	ENSPKIG00000007196	utp20	98	61.908	Paramormyrops_kingsleyae
ENSGAFG00000006986	utp20	94	54.783	ENSPSIG00000016689	UTP20	98	55.186	Pelodiscus_sinensis
ENSGAFG00000006986	utp20	99	71.785	ENSPMGG00000004066	utp20	97	71.661	Periophthalmus_magnuspinnatus
ENSGAFG00000006986	utp20	99	54.191	ENSPEMG00000024120	Utp20	97	53.778	Peromyscus_maniculatus_bairdii
ENSGAFG00000006986	utp20	99	53.249	ENSPCIG00000009298	UTP20	97	53.319	Phascolarctos_cinereus
ENSGAFG00000006986	utp20	92	88.474	ENSPFOG00000003312	utp20	98	88.972	Poecilia_formosa
ENSGAFG00000006986	utp20	100	90.689	ENSPLAG00000012874	utp20	99	90.913	Poecilia_latipinna
ENSGAFG00000006986	utp20	100	84.424	ENSPMEG00000005915	utp20	99	89.045	Poecilia_mexicana
ENSGAFG00000006986	utp20	100	92.059	ENSPREG00000013285	utp20	99	92.214	Poecilia_reticulata
ENSGAFG00000006986	utp20	89	53.996	ENSPPYG00000004871	UTP20	99	53.955	Pongo_abelii
ENSGAFG00000006986	utp20	80	60.417	ENSPCAG00000012791	UTP20	78	56.267	Procavia_capensis
ENSGAFG00000006986	utp20	98	53.092	ENSPCOG00000024948	UTP20	97	53.549	Propithecus_coquereli
ENSGAFG00000006986	utp20	99	52.973	ENSPVAG00000008113	UTP20	97	52.967	Pteropus_vampyrus
ENSGAFG00000006986	utp20	100	75.362	ENSPNYG00000011561	utp20	98	75.565	Pundamilia_nyererei
ENSGAFG00000006986	utp20	100	63.929	ENSPNAG00000006176	utp20	97	63.454	Pygocentrus_nattereri
ENSGAFG00000006986	utp20	99	53.411	ENSRNOG00000005823	Utp20	97	53.092	Rattus_norvegicus
ENSGAFG00000006986	utp20	99	52.672	ENSRBIG00000025384	UTP20	97	52.416	Rhinopithecus_bieti
ENSGAFG00000006986	utp20	99	54.042	ENSRROG00000041254	UTP20	97	54.128	Rhinopithecus_roxellana
ENSGAFG00000006986	utp20	99	53.897	ENSSBOG00000035762	UTP20	97	53.908	Saimiri_boliviensis_boliviensis
ENSGAFG00000006986	utp20	99	52.905	ENSSHAG00000002298	UTP20	96	56.126	Sarcophilus_harrisii
ENSGAFG00000006986	utp20	99	64.508	ENSSFOG00015001674	utp20	98	64.194	Scleropages_formosus
ENSGAFG00000006986	utp20	100	76.700	ENSSMAG00000016460	utp20	99	76.662	Scophthalmus_maximus
ENSGAFG00000006986	utp20	100	77.692	ENSSDUG00000013730	utp20	98	77.774	Seriola_dumerili
ENSGAFG00000006986	utp20	100	76.735	ENSSLDG00000012844	utp20	98	76.957	Seriola_lalandi_dorsalis
ENSGAFG00000006986	utp20	56	88.889	ENSSARG00000002796	-	53	88.889	Sorex_araneus
ENSGAFG00000006986	utp20	99	54.082	ENSSPUG00000004513	UTP20	97	54.160	Sphenodon_punctatus
ENSGAFG00000006986	utp20	100	77.308	ENSSPAG00000014674	utp20	98	77.061	Stegastes_partitus
ENSGAFG00000006986	utp20	99	54.039	ENSSSCG00000000869	UTP20	97	53.950	Sus_scrofa
ENSGAFG00000006986	utp20	77	54.306	ENSTGUG00000009053	-	99	54.410	Taeniopygia_guttata
ENSGAFG00000006986	utp20	99	74.479	ENSTRUG00000005849	utp20	95	76.540	Takifugu_rubripes
ENSGAFG00000006986	utp20	99	72.340	ENSTNIG00000006921	utp20	97	72.295	Tetraodon_nigroviridis
ENSGAFG00000006986	utp20	91	50.588	ENSTBEG00000011917	UTP20	88	50.588	Tupaia_belangeri
ENSGAFG00000006986	utp20	97	54.102	ENSTTRG00000017195	UTP20	95	54.102	Tursiops_truncatus
ENSGAFG00000006986	utp20	99	54.145	ENSUAMG00000016363	UTP20	97	53.984	Ursus_americanus
ENSGAFG00000006986	utp20	99	53.464	ENSUMAG00000000077	UTP20	97	53.436	Ursus_maritimus
ENSGAFG00000006986	utp20	87	54.701	ENSVPAG00000011620	UTP20	87	54.830	Vicugna_pacos
ENSGAFG00000006986	utp20	99	54.076	ENSVVUG00000018110	UTP20	97	53.953	Vulpes_vulpes
ENSGAFG00000006986	utp20	99	54.033	ENSXETG00000032346	UTP20	99	53.950	Xenopus_tropicalis
ENSGAFG00000006986	utp20	100	93.851	ENSXMAG00000006503	utp20	99	94.054	Xiphophorus_maculatus