EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000007224 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 1908 bases
Position: chrNHOQ01000034.1:6806530-6808437
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010669	RRM_1	PF00076.22	6.5e-36	1	3
ENSGAFP00000010669	RRM_1	PF00076.22	6.5e-36	2	3
ENSGAFP00000010669	RRM_1	PF00076.22	6.5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000010779	-	1908	-	ENSGAFP00000010669	635 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007224	rbm12b	86	48.052	ENSG00000183808	RBM12B	98	76.250	Homo_sapiens
ENSGAFG00000007224	rbm12b	100	63.893	ENSAPOG00000013963	rbm12b	100	63.893	Acanthochromis_polyacanthus
ENSGAFG00000007224	rbm12b	72	31.557	ENSAPOG00000008836	zgc:153215	95	30.704	Acanthochromis_polyacanthus
ENSGAFG00000007224	rbm12b	91	46.753	ENSAMEG00000007134	RBM12B	70	46.753	Ailuropoda_melanoleuca
ENSGAFG00000007224	rbm12b	98	61.006	ENSACIG00000014943	rbm12b	97	63.333	Amphilophus_citrinellus
ENSGAFG00000007224	rbm12b	74	30.906	ENSAOCG00000010819	zgc:153215	99	30.255	Amphiprion_ocellaris
ENSGAFG00000007224	rbm12b	100	65.149	ENSAOCG00000024270	rbm12b	100	65.149	Amphiprion_ocellaris
ENSGAFG00000007224	rbm12b	98	41.082	ENSAPEG00000022079	rbm12b	99	60.526	Amphiprion_percula
ENSGAFG00000007224	rbm12b	100	61.478	ENSATEG00000004578	rbm12b	97	61.164	Anabas_testudineus
ENSGAFG00000007224	rbm12b	74	51.852	ENSATEG00000001886	zgc:153215	78	49.438	Anabas_testudineus
ENSGAFG00000007224	rbm12b	100	37.749	ENSAPLG00000002020	RBM12B	100	37.696	Anas_platyrhynchos
ENSGAFG00000007224	rbm12b	90	42.424	ENSACAG00000003463	RBM12B	59	42.424	Anolis_carolinensis
ENSGAFG00000007224	rbm12b	86	48.052	ENSANAG00000034015	RBM12B	67	48.052	Aotus_nancymaae
ENSGAFG00000007224	rbm12b	100	59.599	ENSACLG00000005578	rbm12b	100	59.599	Astatotilapia_calliptera
ENSGAFG00000007224	rbm12b	100	65.149	ENSACLG00000005575	rbm12b	98	65.149	Astatotilapia_calliptera
ENSGAFG00000007224	rbm12b	74	53.933	ENSAMXG00000020853	zgc:153215	75	45.133	Astyanax_mexicanus
ENSGAFG00000007224	rbm12b	100	45.356	ENSAMXG00000041973	rbm12b	100	45.833	Astyanax_mexicanus
ENSGAFG00000007224	rbm12b	87	48.052	ENSBTAG00000013408	RBM12B	65	48.052	Bos_taurus
ENSGAFG00000007224	rbm12b	86	46.753	ENSCAFG00000009109	RBM12B	56	46.753	Canis_familiaris
ENSGAFG00000007224	rbm12b	86	46.753	ENSCAFG00020012203	RBM12B	77	40.816	Canis_lupus_dingo
ENSGAFG00000007224	rbm12b	75	41.046	ENSCHIG00000006790	RBM12B	68	40.162	Capra_hircus
ENSGAFG00000007224	rbm12b	86	46.753	ENSTSYG00000012515	RBM12B	57	46.753	Carlito_syrichta
ENSGAFG00000007224	rbm12b	87	49.351	ENSCAPG00000003543	RBM12B	60	49.351	Cavia_aperea
ENSGAFG00000007224	rbm12b	87	49.351	ENSCPOG00000007815	RBM12B	60	49.351	Cavia_porcellus
ENSGAFG00000007224	rbm12b	86	48.052	ENSCATG00000030769	RBM12B	65	48.052	Cercocebus_atys
ENSGAFG00000007224	rbm12b	87	49.351	ENSCLAG00000017617	RBM12B	60	49.351	Chinchilla_lanigera
ENSGAFG00000007224	rbm12b	86	48.052	ENSCSAG00000018559	RBM12B	56	48.052	Chlorocebus_sabaeus
ENSGAFG00000007224	rbm12b	84	44.444	ENSCHOG00000008934	RBM12B	58	44.444	Choloepus_hoffmanni
ENSGAFG00000007224	rbm12b	100	38.109	ENSCPBG00000003061	RBM12B	100	37.016	Chrysemys_picta_bellii
ENSGAFG00000007224	rbm12b	86	48.052	ENSCANG00000030379	RBM12B	65	48.052	Colobus_angolensis_palliatus
ENSGAFG00000007224	rbm12b	86	49.351	ENSCGRG00001008710	-	65	49.351	Cricetulus_griseus_chok1gshd
ENSGAFG00000007224	rbm12b	73	30.387	ENSCSEG00000001575	-	99	30.769	Cynoglossus_semilaevis
ENSGAFG00000007224	rbm12b	100	56.949	ENSCSEG00000004610	rbm12b	97	56.732	Cynoglossus_semilaevis
ENSGAFG00000007224	rbm12b	100	75.196	ENSCVAG00000011047	rbm12b	100	75.196	Cyprinodon_variegatus
ENSGAFG00000007224	rbm12b	100	42.373	ENSDARG00000079717	rbm12b	100	42.676	Danio_rerio
ENSGAFG00000007224	rbm12b	92	41.582	ENSDNOG00000041608	RBM12B	59	41.189	Dasypus_novemcinctus
ENSGAFG00000007224	rbm12b	86	49.351	ENSDORG00000024034	-	60	49.351	Dipodomys_ordii
ENSGAFG00000007224	rbm12b	75	40.365	ENSETEG00000013005	-	66	39.757	Echinops_telfairi
ENSGAFG00000007224	rbm12b	72	30.189	ENSEBUG00000010930	-	84	31.078	Eptatretus_burgeri
ENSGAFG00000007224	rbm12b	86	48.052	ENSEASG00005016297	RBM12B	64	48.052	Equus_asinus_asinus
ENSGAFG00000007224	rbm12b	86	48.052	ENSECAG00000017870	RBM12B	57	48.052	Equus_caballus
ENSGAFG00000007224	rbm12b	86	46.753	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSGAFG00000007224	rbm12b	100	36.479	ENSFALG00000014893	RBM12B	100	35.966	Ficedula_albicollis
ENSGAFG00000007224	rbm12b	87	49.351	ENSFDAG00000005576	RBM12B	58	49.351	Fukomys_damarensis
ENSGAFG00000007224	rbm12b	72	31.020	ENSFHEG00000014539	zgc:153215	94	30.586	Fundulus_heteroclitus
ENSGAFG00000007224	rbm12b	100	76.875	ENSFHEG00000016425	rbm12b	100	76.875	Fundulus_heteroclitus
ENSGAFG00000007224	rbm12b	99	52.188	ENSGMOG00000013467	rbm12b	100	52.188	Gadus_morhua
ENSGAFG00000007224	rbm12b	100	37.677	ENSGALG00000035129	RBM12B	100	37.163	Gallus_gallus
ENSGAFG00000007224	rbm12b	100	60.714	ENSGACG00000008682	rbm12b	99	59.627	Gasterosteus_aculeatus
ENSGAFG00000007224	rbm12b	100	37.980	ENSGAGG00000009774	RBM12B	100	36.895	Gopherus_agassizii
ENSGAFG00000007224	rbm12b	86	46.753	ENSGGOG00000011909	RBM12B	64	46.753	Gorilla_gorilla
ENSGAFG00000007224	rbm12b	100	63.359	ENSHBUG00000016227	rbm12b	100	63.359	Haplochromis_burtoni
ENSGAFG00000007224	rbm12b	87	49.351	ENSHGLG00000009063	RBM12B	59	49.351	Heterocephalus_glaber_female
ENSGAFG00000007224	rbm12b	87	49.351	ENSHGLG00100021324	RBM12B	59	49.351	Heterocephalus_glaber_male
ENSGAFG00000007224	rbm12b	100	52.508	ENSHCOG00000014952	rbm12b	100	52.508	Hippocampus_comes
ENSGAFG00000007224	rbm12b	100	45.921	ENSIPUG00000001167	RBM12B	97	45.770	Ictalurus_punctatus
ENSGAFG00000007224	rbm12b	73	30.132	ENSIPUG00000019731	zgc:153215	80	51.685	Ictalurus_punctatus
ENSGAFG00000007224	rbm12b	89	44.118	ENSSTOG00000027445	RBM12B	67	49.351	Ictidomys_tridecemlineatus
ENSGAFG00000007224	rbm12b	91	48.052	ENSJJAG00000004165	-	68	48.052	Jaculus_jaculus
ENSGAFG00000007224	rbm12b	100	63.108	ENSKMAG00000013715	rbm12b	100	63.108	Kryptolebias_marmoratus
ENSGAFG00000007224	rbm12b	100	62.794	ENSKMAG00000013704	rbm12b	97	62.794	Kryptolebias_marmoratus
ENSGAFG00000007224	rbm12b	74	31.463	ENSLBEG00000002597	zgc:153215	99	31.463	Labrus_bergylta
ENSGAFG00000007224	rbm12b	100	38.793	ENSLACG00000007177	RBM12B	100	39.511	Latimeria_chalumnae
ENSGAFG00000007224	rbm12b	100	46.501	ENSLOCG00000018344	rbm12b	100	46.199	Lepisosteus_oculatus
ENSGAFG00000007224	rbm12b	99	40.984	ENSLAFG00000029949	RBM12B	82	41.031	Loxodonta_africana
ENSGAFG00000007224	rbm12b	86	48.052	ENSMFAG00000045430	RBM12B	65	48.052	Macaca_fascicularis
ENSGAFG00000007224	rbm12b	86	48.052	ENSMMUG00000005558	RBM12B	64	48.052	Macaca_mulatta
ENSGAFG00000007224	rbm12b	86	48.052	ENSMNEG00000041292	RBM12B	65	48.052	Macaca_nemestrina
ENSGAFG00000007224	rbm12b	86	48.052	ENSMLEG00000037288	RBM12B	63	48.052	Mandrillus_leucophaeus
ENSGAFG00000007224	rbm12b	100	64.263	ENSMAMG00000011998	rbm12b	100	63.480	Mastacembelus_armatus
ENSGAFG00000007224	rbm12b	100	64.992	ENSMZEG00005015005	rbm12b	100	64.992	Maylandia_zebra
ENSGAFG00000007224	rbm12b	100	62.637	ENSMZEG00005014845	rbm12b	99	62.303	Maylandia_zebra
ENSGAFG00000007224	rbm12b	86	49.351	ENSMAUG00000021752	-	67	49.351	Mesocricetus_auratus
ENSGAFG00000007224	rbm12b	86	48.052	ENSMICG00000036969	RBM12B	66	48.052	Microcebus_murinus
ENSGAFG00000007224	rbm12b	86	48.052	ENSMOCG00000005603	-	67	48.052	Microtus_ochrogaster
ENSGAFG00000007224	rbm12b	99	59.055	ENSMMOG00000002404	rbm12b	94	59.055	Mola_mola
ENSGAFG00000007224	rbm12b	86	45.455	ENSMODG00000007436	RBM12B	75	45.455	Monodelphis_domestica
ENSGAFG00000007224	rbm12b	100	57.477	ENSMALG00000012059	rbm12b	100	57.632	Monopterus_albus
ENSGAFG00000007224	rbm12b	74	32.000	ENSMALG00000001222	zgc:153215	98	32.000	Monopterus_albus
ENSGAFG00000007224	rbm12b	86	46.667	ENSMUSG00000052137	Rbm12b2	67	46.667	Mus_musculus
ENSGAFG00000007224	rbm12b	86	48.000	ENSMUSG00000046667	Rbm12b1	68	48.000	Mus_musculus
ENSGAFG00000007224	rbm12b	86	46.667	MGP_SPRETEiJ_G0026765	-	61	46.667	Mus_spretus
ENSGAFG00000007224	rbm12b	86	46.667	MGP_SPRETEiJ_G0026766	-	67	46.667	Mus_spretus
ENSGAFG00000007224	rbm12b	86	48.052	ENSMPUG00000018637	RBM12B	56	48.052	Mustela_putorius_furo
ENSGAFG00000007224	rbm12b	92	41.046	ENSMLUG00000002359	RBM12B	63	40.496	Myotis_lucifugus
ENSGAFG00000007224	rbm12b	86	46.753	ENSNGAG00000002801	-	61	46.753	Nannospalax_galili
ENSGAFG00000007224	rbm12b	100	65.620	ENSNBRG00000015057	rbm12b	100	65.620	Neolamprologus_brichardi
ENSGAFG00000007224	rbm12b	86	48.052	ENSNLEG00000032050	RBM12B	63	48.052	Nomascus_leucogenys
ENSGAFG00000007224	rbm12b	87	49.351	ENSODEG00000019204	RBM12B	60	49.351	Octodon_degus
ENSGAFG00000007224	rbm12b	100	66.091	ENSONIG00000020612	rbm12b	100	66.091	Oreochromis_niloticus
ENSGAFG00000007224	rbm12b	100	37.787	ENSOANG00000015735	-	97	37.931	Ornithorhynchus_anatinus
ENSGAFG00000007224	rbm12b	86	48.052	ENSOCUG00000010353	RBM12B	64	48.052	Oryctolagus_cuniculus
ENSGAFG00000007224	rbm12b	100	64.163	ENSORLG00000008228	rbm12b	97	63.975	Oryzias_latipes
ENSGAFG00000007224	rbm12b	100	64.441	ENSORLG00020013619	rbm12b	97	64.441	Oryzias_latipes_hni
ENSGAFG00000007224	rbm12b	100	64.476	ENSORLG00015019999	rbm12b	97	64.286	Oryzias_latipes_hsok
ENSGAFG00000007224	rbm12b	100	65.156	ENSOMEG00000022523	rbm12b	97	65.156	Oryzias_melastigma
ENSGAFG00000007224	rbm12b	86	48.052	ENSOGAG00000002979	RBM12B	57	48.052	Otolemur_garnettii
ENSGAFG00000007224	rbm12b	86	46.753	ENSPTIG00000020071	RBM12B	65	46.753	Panthera_tigris_altaica
ENSGAFG00000007224	rbm12b	86	48.052	ENSPTRG00000020420	RBM12B	64	48.052	Pan_troglodytes
ENSGAFG00000007224	rbm12b	86	48.052	ENSPANG00000035535	RBM12B	63	48.052	Papio_anubis
ENSGAFG00000007224	rbm12b	77	32.879	ENSPKIG00000014851	zgc:153215	80	55.814	Paramormyrops_kingsleyae
ENSGAFG00000007224	rbm12b	100	48.726	ENSPKIG00000018719	rbm12b	99	48.126	Paramormyrops_kingsleyae
ENSGAFG00000007224	rbm12b	100	39.137	ENSPSIG00000001348	RBM12B	100	38.705	Pelodiscus_sinensis
ENSGAFG00000007224	rbm12b	86	49.351	ENSPEMG00000008279	-	67	49.351	Peromyscus_maniculatus_bairdii
ENSGAFG00000007224	rbm12b	86	45.455	ENSPCIG00000008556	RBM12B	77	45.455	Phascolarctos_cinereus
ENSGAFG00000007224	rbm12b	74	42.623	ENSPFOG00000017451	zgc:153215	69	44.954	Poecilia_formosa
ENSGAFG00000007224	rbm12b	100	93.386	ENSPFOG00000020937	rbm12b	97	93.386	Poecilia_formosa
ENSGAFG00000007224	rbm12b	100	95.276	ENSPLAG00000018782	rbm12b	100	95.276	Poecilia_latipinna
ENSGAFG00000007224	rbm12b	100	95.118	ENSPMEG00000011418	rbm12b	100	95.118	Poecilia_mexicana
ENSGAFG00000007224	rbm12b	100	95.118	ENSPREG00000020770	rbm12b	100	95.118	Poecilia_reticulata
ENSGAFG00000007224	rbm12b	86	48.052	ENSPPYG00000018745	RBM12B	56	48.052	Pongo_abelii
ENSGAFG00000007224	rbm12b	86	46.753	ENSPCOG00000023546	RBM12B	64	46.753	Propithecus_coquereli
ENSGAFG00000007224	rbm12b	86	48.052	ENSPVAG00000011803	RBM12B	60	48.052	Pteropus_vampyrus
ENSGAFG00000007224	rbm12b	100	65.149	ENSPNYG00000016696	rbm12b	100	65.149	Pundamilia_nyererei
ENSGAFG00000007224	rbm12b	70	47.170	ENSPNAG00000025628	zgc:153215	79	47.170	Pygocentrus_nattereri
ENSGAFG00000007224	rbm12b	100	45.373	ENSPNAG00000008126	rbm12b	97	46.498	Pygocentrus_nattereri
ENSGAFG00000007224	rbm12b	87	45.122	ENSRNOG00000016330	Rbm12b	67	45.122	Rattus_norvegicus
ENSGAFG00000007224	rbm12b	74	39.837	ENSRNOG00000055292	LOC679087	65	39.431	Rattus_norvegicus
ENSGAFG00000007224	rbm12b	86	48.052	ENSRBIG00000035046	RBM12B	64	48.052	Rhinopithecus_bieti
ENSGAFG00000007224	rbm12b	86	48.052	ENSRROG00000023660	RBM12B	67	48.052	Rhinopithecus_roxellana
ENSGAFG00000007224	rbm12b	86	48.052	ENSSBOG00000027592	RBM12B	63	48.052	Saimiri_boliviensis_boliviensis
ENSGAFG00000007224	rbm12b	86	45.455	ENSSHAG00000015335	RBM12B	77	45.455	Sarcophilus_harrisii
ENSGAFG00000007224	rbm12b	100	46.402	ENSSFOG00015001584	rbm12b	100	46.233	Scleropages_formosus
ENSGAFG00000007224	rbm12b	74	34.064	ENSSFOG00015009427	zgc:153215	99	32.806	Scleropages_formosus
ENSGAFG00000007224	rbm12b	100	62.009	ENSSMAG00000019708	rbm12b	100	62.009	Scophthalmus_maximus
ENSGAFG00000007224	rbm12b	100	63.206	ENSSDUG00000006856	rbm12b	100	63.206	Seriola_dumerili
ENSGAFG00000007224	rbm12b	74	30.661	ENSSDUG00000012545	zgc:153215	98	30.461	Seriola_dumerili
ENSGAFG00000007224	rbm12b	74	53.086	ENSSLDG00000013581	zgc:153215	79	47.917	Seriola_lalandi_dorsalis
ENSGAFG00000007224	rbm12b	100	63.511	ENSSLDG00000016156	rbm12b	100	63.511	Seriola_lalandi_dorsalis
ENSGAFG00000007224	rbm12b	75	41.800	ENSSARG00000011845	-	67	41.200	Sorex_araneus
ENSGAFG00000007224	rbm12b	76	39.619	ENSSPUG00000016954	RBM12B	92	39.048	Sphenodon_punctatus
ENSGAFG00000007224	rbm12b	100	65.463	ENSSPAG00000006774	rbm12b	100	65.463	Stegastes_partitus
ENSGAFG00000007224	rbm12b	74	31.590	ENSSPAG00000023584	zgc:153215	98	30.753	Stegastes_partitus
ENSGAFG00000007224	rbm12b	86	46.667	ENSSSCG00000006110	RBM12B	57	46.667	Sus_scrofa
ENSGAFG00000007224	rbm12b	74	39.157	ENSTGUG00000011860	RBM12B	95	39.315	Taeniopygia_guttata
ENSGAFG00000007224	rbm12b	100	56.672	ENSTRUG00000013738	rbm12b	100	56.672	Takifugu_rubripes
ENSGAFG00000007224	rbm12b	75	40.519	ENSTBEG00000000449	RBM12B	63	40.159	Tupaia_belangeri
ENSGAFG00000007224	rbm12b	86	48.052	ENSUAMG00000023639	RBM12B	63	48.052	Ursus_americanus
ENSGAFG00000007224	rbm12b	86	48.052	ENSUMAG00000016008	RBM12B	61	48.052	Ursus_maritimus
ENSGAFG00000007224	rbm12b	99	41.633	ENSVVUG00000002694	RBM12B	77	41.020	Vulpes_vulpes
ENSGAFG00000007224	rbm12b	100	36.652	ENSXETG00000014694	rbm12b	99	39.630	Xenopus_tropicalis
ENSGAFG00000007224	rbm12b	73	34.115	ENSXETG00000014696	rbm12b	67	33.049	Xenopus_tropicalis
ENSGAFG00000007224	rbm12b	100	97.008	ENSXMAG00000014213	rbm12b	100	97.008	Xiphophorus_maculatus