EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000007257 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12757 bases
Position: chrNHOQ01001156.1:5332316-5345072
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010723	RTC	PF01137.21	2e-58	1	1
ENSGAFP00000010736	RTC	PF01137.21	5e-50	1	1
ENSGAFP00000010723	RTC_insert	PF05189.13	9.8e-37	1	1
ENSGAFP00000010736	RTC_insert	PF05189.13	1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000010849	-	1134	-	ENSGAFP00000010736	377 (aa)	-	-
ENSGAFT00000010835	-	5817	-	ENSGAFP00000010723	372 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007257	rcl1	99	78.378	ENSG00000120158	RCL1	100	80.556	Homo_sapiens
ENSGAFG00000007257	rcl1	100	92.473	ENSAPOG00000015666	rcl1	100	92.473	Acanthochromis_polyacanthus
ENSGAFG00000007257	rcl1	99	79.459	ENSAMEG00000002631	RCL1	99	79.459	Ailuropoda_melanoleuca
ENSGAFG00000007257	rcl1	100	90.860	ENSACIG00000021195	rcl1	100	90.860	Amphilophus_citrinellus
ENSGAFG00000007257	rcl1	100	91.935	ENSAOCG00000002223	rcl1	100	91.935	Amphiprion_ocellaris
ENSGAFG00000007257	rcl1	100	92.473	ENSAPEG00000006905	rcl1	100	92.473	Amphiprion_percula
ENSGAFG00000007257	rcl1	100	89.247	ENSATEG00000020026	rcl1	100	89.247	Anabas_testudineus
ENSGAFG00000007257	rcl1	88	75.988	ENSAPLG00000006031	RCL1	100	75.988	Anas_platyrhynchos
ENSGAFG00000007257	rcl1	99	73.514	ENSACAG00000003640	RCL1	99	73.514	Anolis_carolinensis
ENSGAFG00000007257	rcl1	99	77.838	ENSANAG00000037372	RCL1	99	77.838	Aotus_nancymaae
ENSGAFG00000007257	rcl1	100	90.860	ENSACLG00000021724	rcl1	100	90.860	Astatotilapia_calliptera
ENSGAFG00000007257	rcl1	99	83.696	ENSAMXG00000033394	rcl1	99	83.696	Astyanax_mexicanus
ENSGAFG00000007257	rcl1	99	45.767	WBGene00022852	ZK1127.5	99	45.767	Caenorhabditis_elegans
ENSGAFG00000007257	rcl1	99	78.108	ENSCJAG00000011202	RCL1	99	78.108	Callithrix_jacchus
ENSGAFG00000007257	rcl1	99	79.459	ENSCAFG00000002091	RCL1	99	79.459	Canis_familiaris
ENSGAFG00000007257	rcl1	99	79.459	ENSCAFG00020000638	RCL1	77	79.459	Canis_lupus_dingo
ENSGAFG00000007257	rcl1	99	78.108	ENSCHIG00000012407	RCL1	99	78.108	Capra_hircus
ENSGAFG00000007257	rcl1	88	79.878	ENSTSYG00000009592	RCL1	97	80.769	Carlito_syrichta
ENSGAFG00000007257	rcl1	66	69.753	ENSCAPG00000013575	RCL1	100	69.753	Cavia_aperea
ENSGAFG00000007257	rcl1	99	78.378	ENSCPOG00000015354	RCL1	99	78.378	Cavia_porcellus
ENSGAFG00000007257	rcl1	99	78.108	ENSCCAG00000033505	RCL1	99	78.108	Cebus_capucinus
ENSGAFG00000007257	rcl1	99	78.108	ENSCATG00000034721	RCL1	99	78.108	Cercocebus_atys
ENSGAFG00000007257	rcl1	99	78.378	ENSCLAG00000007445	RCL1	99	78.378	Chinchilla_lanigera
ENSGAFG00000007257	rcl1	99	78.108	ENSCSAG00000008811	RCL1	99	78.108	Chlorocebus_sabaeus
ENSGAFG00000007257	rcl1	86	68.966	ENSCHOG00000007216	RCL1	99	68.966	Choloepus_hoffmanni
ENSGAFG00000007257	rcl1	100	75.401	ENSCPBG00000025481	RCL1	94	76.364	Chrysemys_picta_bellii
ENSGAFG00000007257	rcl1	99	58.919	ENSCING00000019565	-	98	58.919	Ciona_intestinalis
ENSGAFG00000007257	rcl1	99	78.108	ENSCANG00000027099	RCL1	99	78.108	Colobus_angolensis_palliatus
ENSGAFG00000007257	rcl1	99	78.649	ENSCGRG00001013748	Rcl1	99	78.649	Cricetulus_griseus_chok1gshd
ENSGAFG00000007257	rcl1	88	79.331	ENSCGRG00000005843	Rcl1	99	79.331	Cricetulus_griseus_crigri
ENSGAFG00000007257	rcl1	100	88.710	ENSCSEG00000000712	rcl1	98	88.710	Cynoglossus_semilaevis
ENSGAFG00000007257	rcl1	100	94.624	ENSCVAG00000011536	rcl1	100	94.624	Cyprinodon_variegatus
ENSGAFG00000007257	rcl1	99	81.471	ENSDARG00000038312	rcl1	100	81.471	Danio_rerio
ENSGAFG00000007257	rcl1	72	78.571	ENSDNOG00000019911	RCL1	100	80.556	Dasypus_novemcinctus
ENSGAFG00000007257	rcl1	99	79.189	ENSDORG00000015645	Rcl1	99	79.189	Dipodomys_ordii
ENSGAFG00000007257	rcl1	98	54.155	FBgn0020909	Rtc1	97	54.960	Drosophila_melanogaster
ENSGAFG00000007257	rcl1	62	95.652	ENSETEG00000014087	-	74	95.652	Echinops_telfairi
ENSGAFG00000007257	rcl1	100	55.496	ENSEBUG00000016621	-	99	55.496	Eptatretus_burgeri
ENSGAFG00000007257	rcl1	99	78.378	ENSEASG00005010653	RCL1	99	78.378	Equus_asinus_asinus
ENSGAFG00000007257	rcl1	99	78.378	ENSECAG00000015973	RCL1	99	78.378	Equus_caballus
ENSGAFG00000007257	rcl1	99	66.486	ENSEEUG00000009801	RCL1	99	66.486	Erinaceus_europaeus
ENSGAFG00000007257	rcl1	100	80.645	ENSELUG00000007353	rcl1	100	80.645	Esox_lucius
ENSGAFG00000007257	rcl1	99	78.649	ENSFCAG00000014557	RCL1	99	78.649	Felis_catus
ENSGAFG00000007257	rcl1	100	69.892	ENSFALG00000010553	RCL1	98	69.892	Ficedula_albicollis
ENSGAFG00000007257	rcl1	88	77.134	ENSFDAG00000004209	RCL1	100	77.134	Fukomys_damarensis
ENSGAFG00000007257	rcl1	100	95.430	ENSFHEG00000011228	rcl1	100	95.430	Fundulus_heteroclitus
ENSGAFG00000007257	rcl1	100	83.333	ENSGMOG00000004677	rcl1	100	83.333	Gadus_morhua
ENSGAFG00000007257	rcl1	99	74.663	ENSGALG00000015024	RCL1	99	74.663	Gallus_gallus
ENSGAFG00000007257	rcl1	100	88.441	ENSGACG00000017474	rcl1	100	88.441	Gasterosteus_aculeatus
ENSGAFG00000007257	rcl1	100	75.401	ENSGAGG00000003689	RCL1	100	75.401	Gopherus_agassizii
ENSGAFG00000007257	rcl1	99	77.838	ENSGGOG00000015041	RCL1	99	77.838	Gorilla_gorilla
ENSGAFG00000007257	rcl1	100	91.129	ENSHBUG00000001393	rcl1	100	91.129	Haplochromis_burtoni
ENSGAFG00000007257	rcl1	99	77.297	ENSHGLG00000016452	RCL1	99	77.297	Heterocephalus_glaber_female
ENSGAFG00000007257	rcl1	99	65.583	ENSHGLG00000005368	-	99	65.583	Heterocephalus_glaber_female
ENSGAFG00000007257	rcl1	99	71.892	ENSHGLG00100008718	-	99	71.892	Heterocephalus_glaber_male
ENSGAFG00000007257	rcl1	99	66.396	ENSHGLG00100018010	-	99	66.396	Heterocephalus_glaber_male
ENSGAFG00000007257	rcl1	100	90.591	ENSHCOG00000020170	rcl1	100	90.591	Hippocampus_comes
ENSGAFG00000007257	rcl1	100	83.602	ENSIPUG00000018054	RCL1	100	83.602	Ictalurus_punctatus
ENSGAFG00000007257	rcl1	99	77.838	ENSSTOG00000000023	RCL1	99	77.838	Ictidomys_tridecemlineatus
ENSGAFG00000007257	rcl1	99	68.649	ENSJJAG00000015632	-	99	68.649	Jaculus_jaculus
ENSGAFG00000007257	rcl1	54	62.376	ENSJJAG00000000764	-	98	62.376	Jaculus_jaculus
ENSGAFG00000007257	rcl1	99	78.919	ENSJJAG00000022803	-	99	78.919	Jaculus_jaculus
ENSGAFG00000007257	rcl1	100	93.011	ENSKMAG00000011946	rcl1	100	93.011	Kryptolebias_marmoratus
ENSGAFG00000007257	rcl1	100	86.022	ENSLBEG00000003957	rcl1	100	86.022	Labrus_bergylta
ENSGAFG00000007257	rcl1	93	75.145	ENSLACG00000004594	RCL1	100	79.503	Latimeria_chalumnae
ENSGAFG00000007257	rcl1	100	80.914	ENSLOCG00000010148	rcl1	98	80.914	Lepisosteus_oculatus
ENSGAFG00000007257	rcl1	99	77.027	ENSLAFG00000017495	RCL1	99	77.027	Loxodonta_africana
ENSGAFG00000007257	rcl1	99	78.108	ENSMFAG00000037906	RCL1	99	78.108	Macaca_fascicularis
ENSGAFG00000007257	rcl1	99	78.108	ENSMNEG00000012288	RCL1	99	78.108	Macaca_nemestrina
ENSGAFG00000007257	rcl1	99	78.108	ENSMLEG00000043088	RCL1	99	78.108	Mandrillus_leucophaeus
ENSGAFG00000007257	rcl1	100	91.667	ENSMAMG00000008311	rcl1	100	91.667	Mastacembelus_armatus
ENSGAFG00000007257	rcl1	100	90.860	ENSMZEG00005017292	rcl1	100	90.860	Maylandia_zebra
ENSGAFG00000007257	rcl1	58	74.545	ENSMGAG00000002245	RCL1	100	74.545	Meleagris_gallopavo
ENSGAFG00000007257	rcl1	58	80.556	ENSMAUG00000008922	Rcl1	100	80.556	Mesocricetus_auratus
ENSGAFG00000007257	rcl1	99	78.862	ENSMICG00000015562	RCL1	99	78.862	Microcebus_murinus
ENSGAFG00000007257	rcl1	99	78.378	ENSMOCG00000012145	Rcl1	99	78.378	Microtus_ochrogaster
ENSGAFG00000007257	rcl1	100	87.131	ENSMMOG00000021264	rcl1	100	87.131	Mola_mola
ENSGAFG00000007257	rcl1	95	77.273	ENSMODG00000015377	RCL1	93	77.273	Monodelphis_domestica
ENSGAFG00000007257	rcl1	100	90.591	ENSMALG00000018618	rcl1	100	90.591	Monopterus_albus
ENSGAFG00000007257	rcl1	99	78.378	MGP_CAROLIEiJ_G0022853	Rcl1	99	78.378	Mus_caroli
ENSGAFG00000007257	rcl1	99	77.838	ENSMUSG00000024785	Rcl1	99	77.838	Mus_musculus
ENSGAFG00000007257	rcl1	99	78.649	MGP_PahariEiJ_G0014346	Rcl1	100	78.947	Mus_pahari
ENSGAFG00000007257	rcl1	99	77.838	MGP_SPRETEiJ_G0023771	Rcl1	100	78.363	Mus_spretus
ENSGAFG00000007257	rcl1	99	78.649	ENSMPUG00000004998	RCL1	99	78.649	Mustela_putorius_furo
ENSGAFG00000007257	rcl1	99	77.027	ENSMLUG00000009654	RCL1	99	77.027	Myotis_lucifugus
ENSGAFG00000007257	rcl1	99	78.378	ENSNGAG00000015327	Rcl1	99	78.378	Nannospalax_galili
ENSGAFG00000007257	rcl1	91	89.021	ENSNBRG00000019854	rcl1	99	84.022	Neolamprologus_brichardi
ENSGAFG00000007257	rcl1	99	75.946	ENSNLEG00000008891	RCL1	99	75.946	Nomascus_leucogenys
ENSGAFG00000007257	rcl1	99	71.081	ENSMEUG00000007653	RCL1	99	71.081	Notamacropus_eugenii
ENSGAFG00000007257	rcl1	99	77.297	ENSOPRG00000010965	RCL1	99	77.297	Ochotona_princeps
ENSGAFG00000007257	rcl1	89	64.671	ENSODEG00000004151	RCL1	96	65.350	Octodon_degus
ENSGAFG00000007257	rcl1	100	92.204	ENSONIG00000003871	rcl1	100	92.204	Oreochromis_niloticus
ENSGAFG00000007257	rcl1	66	77.108	ENSOANG00000013193	-	98	77.108	Ornithorhynchus_anatinus
ENSGAFG00000007257	rcl1	99	77.838	ENSOCUG00000008161	RCL1	99	77.838	Oryctolagus_cuniculus
ENSGAFG00000007257	rcl1	100	86.828	ENSORLG00000010443	rcl1	100	86.828	Oryzias_latipes
ENSGAFG00000007257	rcl1	100	87.097	ENSORLG00020012211	rcl1	100	87.097	Oryzias_latipes_hni
ENSGAFG00000007257	rcl1	100	86.559	ENSORLG00015001122	rcl1	100	86.559	Oryzias_latipes_hsok
ENSGAFG00000007257	rcl1	100	89.516	ENSOMEG00000022976	rcl1	88	89.516	Oryzias_melastigma
ENSGAFG00000007257	rcl1	99	77.838	ENSOGAG00000007480	RCL1	99	77.838	Otolemur_garnettii
ENSGAFG00000007257	rcl1	99	78.108	ENSOARG00000013463	RCL1	99	78.108	Ovis_aries
ENSGAFG00000007257	rcl1	99	78.108	ENSPPAG00000037958	RCL1	99	78.108	Pan_paniscus
ENSGAFG00000007257	rcl1	99	77.838	ENSPPRG00000022645	RCL1	99	77.838	Panthera_pardus
ENSGAFG00000007257	rcl1	88	78.899	ENSPTIG00000019031	RCL1	100	80.093	Panthera_tigris_altaica
ENSGAFG00000007257	rcl1	99	77.838	ENSPTRG00000020743	RCL1	99	77.838	Pan_troglodytes
ENSGAFG00000007257	rcl1	99	78.108	ENSPANG00000025151	RCL1	99	78.108	Papio_anubis
ENSGAFG00000007257	rcl1	100	80.645	ENSPKIG00000021022	rcl1	100	80.645	Paramormyrops_kingsleyae
ENSGAFG00000007257	rcl1	88	77.204	ENSPSIG00000012302	RCL1	100	77.204	Pelodiscus_sinensis
ENSGAFG00000007257	rcl1	100	90.591	ENSPMGG00000024007	rcl1	100	90.591	Periophthalmus_magnuspinnatus
ENSGAFG00000007257	rcl1	99	78.649	ENSPEMG00000023275	Rcl1	99	78.649	Peromyscus_maniculatus_bairdii
ENSGAFG00000007257	rcl1	98	30.435	ENSPMAG00000009110	rtca	97	30.435	Petromyzon_marinus
ENSGAFG00000007257	rcl1	99	77.297	ENSPCIG00000000188	RCL1	99	77.297	Phascolarctos_cinereus
ENSGAFG00000007257	rcl1	100	98.118	ENSPFOG00000019682	rcl1	99	98.118	Poecilia_formosa
ENSGAFG00000007257	rcl1	100	98.387	ENSPLAG00000022354	rcl1	100	98.387	Poecilia_latipinna
ENSGAFG00000007257	rcl1	100	98.118	ENSPMEG00000008131	rcl1	100	98.118	Poecilia_mexicana
ENSGAFG00000007257	rcl1	100	98.118	ENSPREG00000008032	rcl1	100	98.118	Poecilia_reticulata
ENSGAFG00000007257	rcl1	99	78.649	ENSPPYG00000019244	RCL1	99	78.649	Pongo_abelii
ENSGAFG00000007257	rcl1	99	72.162	ENSPCAG00000001440	RCL1	99	72.162	Procavia_capensis
ENSGAFG00000007257	rcl1	99	78.919	ENSPCOG00000009611	RCL1	99	78.919	Propithecus_coquereli
ENSGAFG00000007257	rcl1	99	77.838	ENSPVAG00000015752	RCL1	99	77.838	Pteropus_vampyrus
ENSGAFG00000007257	rcl1	100	91.129	ENSPNYG00000012910	rcl1	100	91.129	Pundamilia_nyererei
ENSGAFG00000007257	rcl1	99	83.967	ENSPNAG00000028307	rcl1	91	83.967	Pygocentrus_nattereri
ENSGAFG00000007257	rcl1	99	77.568	ENSRNOG00000015491	Rcl1	99	77.568	Rattus_norvegicus
ENSGAFG00000007257	rcl1	99	77.838	ENSRBIG00000035818	RCL1	99	77.838	Rhinopithecus_bieti
ENSGAFG00000007257	rcl1	99	78.108	ENSRROG00000029781	RCL1	99	78.108	Rhinopithecus_roxellana
ENSGAFG00000007257	rcl1	98	38.587	YOL010W	-	97	38.587	Saccharomyces_cerevisiae
ENSGAFG00000007257	rcl1	99	78.378	ENSSBOG00000026369	RCL1	99	78.378	Saimiri_boliviensis_boliviensis
ENSGAFG00000007257	rcl1	89	77.946	ENSSHAG00000014086	RCL1	100	77.946	Sarcophilus_harrisii
ENSGAFG00000007257	rcl1	100	80.376	ENSSFOG00015023020	rcl1	100	80.376	Scleropages_formosus
ENSGAFG00000007257	rcl1	100	90.860	ENSSMAG00000019751	rcl1	86	90.860	Scophthalmus_maximus
ENSGAFG00000007257	rcl1	100	91.667	ENSSDUG00000006349	rcl1	100	91.667	Seriola_dumerili
ENSGAFG00000007257	rcl1	100	90.860	ENSSLDG00000022076	rcl1	100	90.860	Seriola_lalandi_dorsalis
ENSGAFG00000007257	rcl1	99	78.108	ENSSARG00000009260	RCL1	99	78.108	Sorex_araneus
ENSGAFG00000007257	rcl1	99	75.676	ENSSPUG00000016330	RCL1	99	75.676	Sphenodon_punctatus
ENSGAFG00000007257	rcl1	100	93.280	ENSSPAG00000018038	rcl1	100	93.280	Stegastes_partitus
ENSGAFG00000007257	rcl1	99	78.378	ENSSSCG00000005217	RCL1	82	78.378	Sus_scrofa
ENSGAFG00000007257	rcl1	99	74.194	ENSTGUG00000005138	RCL1	99	74.194	Taeniopygia_guttata
ENSGAFG00000007257	rcl1	100	88.441	ENSTRUG00000010493	rcl1	100	88.441	Takifugu_rubripes
ENSGAFG00000007257	rcl1	100	84.677	ENSTNIG00000013214	rcl1	99	84.677	Tetraodon_nigroviridis
ENSGAFG00000007257	rcl1	99	74.054	ENSTBEG00000016339	RCL1	99	74.054	Tupaia_belangeri
ENSGAFG00000007257	rcl1	99	77.838	ENSTTRG00000016525	RCL1	99	77.838	Tursiops_truncatus
ENSGAFG00000007257	rcl1	99	79.459	ENSUAMG00000005598	RCL1	99	81.250	Ursus_americanus
ENSGAFG00000007257	rcl1	88	79.573	ENSUMAG00000017890	RCL1	97	79.573	Ursus_maritimus
ENSGAFG00000007257	rcl1	88	78.963	ENSVPAG00000009188	RCL1	100	78.963	Vicugna_pacos
ENSGAFG00000007257	rcl1	88	80.547	ENSVVUG00000007304	RCL1	89	80.547	Vulpes_vulpes
ENSGAFG00000007257	rcl1	100	71.733	ENSXETG00000000592	rcl1	100	71.733	Xenopus_tropicalis
ENSGAFG00000007257	rcl1	100	98.925	ENSXCOG00000004922	rcl1	100	98.925	Xiphophorus_couchianus
ENSGAFG00000007257	rcl1	58	30.233	ENSXCOG00000008002	rtca	62	30.233	Xiphophorus_couchianus
ENSGAFG00000007257	rcl1	100	98.925	ENSXMAG00000022366	RCL1	100	98.925	Xiphophorus_maculatus