EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000007322 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5588 bases
Position: chrNHOQ01001678.1:17084434-17090021
Accession: ZDB-GENE-030131-5386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010827	La	PF05383.17	7.7e-21	1	1
ENSGAFP00000010822	La	PF05383.17	1.6e-20	1	1
ENSGAFP00000010818	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000010930	-	1233	-	ENSGAFP00000010818	410 (aa)	-	-
ENSGAFT00000010934	-	1215	-	ENSGAFP00000010822	404 (aa)	-	-
ENSGAFT00000010938	-	741	-	ENSGAFP00000010827	246 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007322	larp1	93	61.538	ENSG00000155506	LARP1	89	66.667	Homo_sapiens
ENSGAFG00000007322	larp1	86	84.507	ENSAOCG00000007792	larp1	50	74.580	Amphiprion_ocellaris
ENSGAFG00000007322	larp1	61	46.209	ENSCSAVG00000008913	-	99	46.209	Ciona_savignyi
ENSGAFG00000007322	larp1	90	83.914	ENSFHEG00000020307	larp1	92	81.046	Fundulus_heteroclitus
ENSGAFG00000007322	larp1	77	63.006	ENSMMUG00000009411	LARP1	76	62.326	Macaca_mulatta