EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000007387 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12970 bases
Position: chrNHOQ01001229.1:8896817-8909786
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000010912	SpoU_methylase	PF00588.19	4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011024	-	6111	-	ENSGAFP00000010912	1624 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007387	si:dkey-85a20.4	85	44.483	ENSG00000059588	TARBP1	99	41.551	Homo_sapiens
ENSGAFG00000007387	si:dkey-85a20.4	99	75.061	ENSAPOG00000016419	si:dkey-85a20.4	99	75.061	Acanthochromis_polyacanthus
ENSGAFG00000007387	si:dkey-85a20.4	83	44.139	ENSAMEG00000003359	TARBP1	99	44.324	Ailuropoda_melanoleuca
ENSGAFG00000007387	si:dkey-85a20.4	99	69.914	ENSATEG00000020266	si:dkey-85a20.4	99	69.975	Anabas_testudineus
ENSGAFG00000007387	si:dkey-85a20.4	83	46.126	ENSAPLG00000007666	TARBP1	99	46.927	Anas_platyrhynchos
ENSGAFG00000007387	si:dkey-85a20.4	83	44.380	ENSACAG00000001142	TARBP1	86	43.977	Anolis_carolinensis
ENSGAFG00000007387	si:dkey-85a20.4	86	43.671	ENSANAG00000022031	TARBP1	89	43.834	Aotus_nancymaae
ENSGAFG00000007387	si:dkey-85a20.4	78	54.883	ENSBTAG00000004517	TARBP1	99	54.883	Bos_taurus
ENSGAFG00000007387	si:dkey-85a20.4	99	41.176	ENSCJAG00000018155	TARBP1	99	41.297	Callithrix_jacchus
ENSGAFG00000007387	si:dkey-85a20.4	85	44.594	ENSCAFG00000011533	TARBP1	98	44.492	Canis_familiaris
ENSGAFG00000007387	si:dkey-85a20.4	85	44.688	ENSCAFG00020027141	TARBP1	85	44.688	Canis_lupus_dingo
ENSGAFG00000007387	si:dkey-85a20.4	85	44.539	ENSCHIG00000011437	TARBP1	99	41.325	Capra_hircus
ENSGAFG00000007387	si:dkey-85a20.4	82	44.208	ENSTSYG00000010382	TARBP1	99	44.355	Carlito_syrichta
ENSGAFG00000007387	si:dkey-85a20.4	78	41.860	ENSCAPG00000010831	TARBP1	99	41.777	Cavia_aperea
ENSGAFG00000007387	si:dkey-85a20.4	85	43.543	ENSCPOG00000013995	TARBP1	99	40.460	Cavia_porcellus
ENSGAFG00000007387	si:dkey-85a20.4	82	54.545	ENSCCAG00000037278	TARBP1	85	54.545	Cebus_capucinus
ENSGAFG00000007387	si:dkey-85a20.4	85	44.642	ENSCATG00000011754	TARBP1	99	41.279	Cercocebus_atys
ENSGAFG00000007387	si:dkey-85a20.4	80	44.078	ENSCLAG00000003655	TARBP1	96	44.237	Chinchilla_lanigera
ENSGAFG00000007387	si:dkey-85a20.4	79	45.343	ENSCSAG00000010100	TARBP1	99	45.420	Chlorocebus_sabaeus
ENSGAFG00000007387	si:dkey-85a20.4	78	44.557	ENSCPBG00000005587	TARBP1	96	43.109	Chrysemys_picta_bellii
ENSGAFG00000007387	si:dkey-85a20.4	83	44.960	ENSCANG00000034343	TARBP1	99	45.033	Colobus_angolensis_palliatus
ENSGAFG00000007387	si:dkey-85a20.4	90	43.088	ENSCGRG00001016690	Tarbp1	92	43.088	Cricetulus_griseus_chok1gshd
ENSGAFG00000007387	si:dkey-85a20.4	85	44.009	ENSCGRG00000016893	Tarbp1	94	44.063	Cricetulus_griseus_crigri
ENSGAFG00000007387	si:dkey-85a20.4	99	61.870	ENSCSEG00000005255	si:dkey-85a20.4	99	66.015	Cynoglossus_semilaevis
ENSGAFG00000007387	si:dkey-85a20.4	99	54.461	ENSDARG00000079055	si:dkey-85a20.4	99	69.257	Danio_rerio
ENSGAFG00000007387	si:dkey-85a20.4	91	42.848	ENSDNOG00000008637	TARBP1	99	41.152	Dasypus_novemcinctus
ENSGAFG00000007387	si:dkey-85a20.4	80	44.799	ENSDORG00000007984	Tarbp1	100	45.186	Dipodomys_ordii
ENSGAFG00000007387	si:dkey-85a20.4	85	45.184	ENSEASG00005000252	TARBP1	99	41.576	Equus_asinus_asinus
ENSGAFG00000007387	si:dkey-85a20.4	85	45.085	ENSECAG00000023673	TARBP1	99	46.389	Equus_caballus
ENSGAFG00000007387	si:dkey-85a20.4	99	57.440	ENSELUG00000012193	si:dkey-85a20.4	99	57.440	Esox_lucius
ENSGAFG00000007387	si:dkey-85a20.4	85	43.018	ENSFCAG00000014183	TARBP1	99	39.820	Felis_catus
ENSGAFG00000007387	si:dkey-85a20.4	80	46.515	ENSFALG00000013565	TARBP1	99	46.426	Ficedula_albicollis
ENSGAFG00000007387	si:dkey-85a20.4	79	43.341	ENSFDAG00000001308	TARBP1	99	43.567	Fukomys_damarensis
ENSGAFG00000007387	si:dkey-85a20.4	95	77.519	ENSFHEG00000007565	si:dkey-85a20.4	98	80.488	Fundulus_heteroclitus
ENSGAFG00000007387	si:dkey-85a20.4	85	61.111	ENSGMOG00000004549	si:dkey-85a20.4	99	61.325	Gadus_morhua
ENSGAFG00000007387	si:dkey-85a20.4	84	44.444	ENSGALG00000011000	TARBP1	99	40.973	Gallus_gallus
ENSGAFG00000007387	si:dkey-85a20.4	86	71.368	ENSGACG00000005865	si:dkey-85a20.4	99	71.298	Gasterosteus_aculeatus
ENSGAFG00000007387	si:dkey-85a20.4	84	46.585	ENSGAGG00000012102	TARBP1	89	46.338	Gopherus_agassizii
ENSGAFG00000007387	si:dkey-85a20.4	84	43.939	ENSGGOG00000022879	TARBP1	99	44.156	Gorilla_gorilla
ENSGAFG00000007387	si:dkey-85a20.4	99	73.616	ENSHBUG00000008877	si:dkey-85a20.4	99	73.616	Haplochromis_burtoni
ENSGAFG00000007387	si:dkey-85a20.4	85	43.128	ENSHGLG00000011592	TARBP1	85	43.669	Heterocephalus_glaber_female
ENSGAFG00000007387	si:dkey-85a20.4	83	43.696	ENSHGLG00100015169	TARBP1	94	43.625	Heterocephalus_glaber_male
ENSGAFG00000007387	si:dkey-85a20.4	97	55.766	ENSIPUG00000005249	si:dkey-85a20.4	98	51.391	Ictalurus_punctatus
ENSGAFG00000007387	si:dkey-85a20.4	82	44.371	ENSSTOG00000032291	TARBP1	96	44.787	Ictidomys_tridecemlineatus
ENSGAFG00000007387	si:dkey-85a20.4	85	42.094	ENSJJAG00000017840	Tarbp1	95	41.778	Jaculus_jaculus
ENSGAFG00000007387	si:dkey-85a20.4	89	70.524	ENSKMAG00000017546	si:dkey-85a20.4	98	70.767	Kryptolebias_marmoratus
ENSGAFG00000007387	si:dkey-85a20.4	82	76.543	ENSLBEG00000012132	si:dkey-85a20.4	94	76.543	Labrus_bergylta
ENSGAFG00000007387	si:dkey-85a20.4	99	43.243	ENSLACG00000004337	TARBP1	99	43.303	Latimeria_chalumnae
ENSGAFG00000007387	si:dkey-85a20.4	99	53.337	ENSLOCG00000016214	si:dkey-85a20.4	100	53.337	Lepisosteus_oculatus
ENSGAFG00000007387	si:dkey-85a20.4	85	44.986	ENSLAFG00000011394	TARBP1	95	43.421	Loxodonta_africana
ENSGAFG00000007387	si:dkey-85a20.4	85	43.352	ENSMFAG00000041068	TARBP1	92	42.088	Macaca_fascicularis
ENSGAFG00000007387	si:dkey-85a20.4	85	43.281	ENSMMUG00000021703	TARBP1	99	40.024	Macaca_mulatta
ENSGAFG00000007387	si:dkey-85a20.4	85	44.642	ENSMNEG00000045002	TARBP1	99	41.219	Macaca_nemestrina
ENSGAFG00000007387	si:dkey-85a20.4	83	44.982	ENSMLEG00000044182	TARBP1	99	45.055	Mandrillus_leucophaeus
ENSGAFG00000007387	si:dkey-85a20.4	99	68.470	ENSMAMG00000021760	si:dkey-85a20.4	99	68.593	Mastacembelus_armatus
ENSGAFG00000007387	si:dkey-85a20.4	99	73.432	ENSMZEG00005005751	si:dkey-85a20.4	99	73.432	Maylandia_zebra
ENSGAFG00000007387	si:dkey-85a20.4	90	43.221	ENSMAUG00000020968	Tarbp1	92	43.221	Mesocricetus_auratus
ENSGAFG00000007387	si:dkey-85a20.4	85	40.634	ENSMICG00000015280	TARBP1	99	37.740	Microcebus_murinus
ENSGAFG00000007387	si:dkey-85a20.4	85	43.559	ENSMOCG00000004128	Tarbp1	87	43.559	Microtus_ochrogaster
ENSGAFG00000007387	si:dkey-85a20.4	99	66.273	ENSMMOG00000007795	si:dkey-85a20.4	99	66.087	Mola_mola
ENSGAFG00000007387	si:dkey-85a20.4	85	44.011	ENSMODG00000008504	TARBP1	99	40.716	Monodelphis_domestica
ENSGAFG00000007387	si:dkey-85a20.4	99	67.724	ENSMALG00000002916	si:dkey-85a20.4	99	67.724	Monopterus_albus
ENSGAFG00000007387	si:dkey-85a20.4	91	42.430	MGP_CAROLIEiJ_G0031729	Tarbp1	99	40.575	Mus_caroli
ENSGAFG00000007387	si:dkey-85a20.4	90	42.867	ENSMUSG00000090290	Tarbp1	92	42.790	Mus_musculus
ENSGAFG00000007387	si:dkey-85a20.4	90	43.502	MGP_PahariEiJ_G0023326	Tarbp1	92	43.502	Mus_pahari
ENSGAFG00000007387	si:dkey-85a20.4	90	42.790	MGP_SPRETEiJ_G0032846	Tarbp1	92	42.790	Mus_spretus
ENSGAFG00000007387	si:dkey-85a20.4	76	45.267	ENSMPUG00000002802	TARBP1	99	45.267	Mustela_putorius_furo
ENSGAFG00000007387	si:dkey-85a20.4	83	43.519	ENSMLUG00000002414	TARBP1	99	43.664	Myotis_lucifugus
ENSGAFG00000007387	si:dkey-85a20.4	85	44.523	ENSNLEG00000002518	TARBP1	99	41.462	Nomascus_leucogenys
ENSGAFG00000007387	si:dkey-85a20.4	68	52.990	ENSOPRG00000013822	TARBP1	69	52.990	Ochotona_princeps
ENSGAFG00000007387	si:dkey-85a20.4	83	44.243	ENSODEG00000005238	TARBP1	88	44.316	Octodon_degus
ENSGAFG00000007387	si:dkey-85a20.4	85	75.285	ENSONIG00000009789	si:dkey-85a20.4	100	75.356	Oreochromis_niloticus
ENSGAFG00000007387	si:dkey-85a20.4	85	43.697	ENSOCUG00000017418	TARBP1	99	40.383	Oryctolagus_cuniculus
ENSGAFG00000007387	si:dkey-85a20.4	99	68.288	ENSORLG00000010529	si:dkey-85a20.4	99	68.350	Oryzias_latipes
ENSGAFG00000007387	si:dkey-85a20.4	99	67.980	ENSORLG00020019264	si:dkey-85a20.4	99	68.042	Oryzias_latipes_hni
ENSGAFG00000007387	si:dkey-85a20.4	99	67.919	ENSORLG00015003276	si:dkey-85a20.4	99	67.980	Oryzias_latipes_hsok
ENSGAFG00000007387	si:dkey-85a20.4	85	42.948	ENSOGAG00000002379	TARBP1	99	39.712	Otolemur_garnettii
ENSGAFG00000007387	si:dkey-85a20.4	85	44.547	ENSOARG00000003434	TARBP1	92	44.798	Ovis_aries
ENSGAFG00000007387	si:dkey-85a20.4	83	45.368	ENSPPAG00000028097	TARBP1	99	45.660	Pan_paniscus
ENSGAFG00000007387	si:dkey-85a20.4	80	45.267	ENSPPRG00000013561	TARBP1	87	45.375	Panthera_pardus
ENSGAFG00000007387	si:dkey-85a20.4	82	44.696	ENSPTIG00000009281	TARBP1	99	44.575	Panthera_tigris_altaica
ENSGAFG00000007387	si:dkey-85a20.4	85	44.947	ENSPTRG00000002124	TARBP1	99	41.742	Pan_troglodytes
ENSGAFG00000007387	si:dkey-85a20.4	85	44.642	ENSPANG00000021933	TARBP1	99	41.219	Papio_anubis
ENSGAFG00000007387	si:dkey-85a20.4	99	55.589	ENSPKIG00000016716	si:dkey-85a20.4	99	55.589	Paramormyrops_kingsleyae
ENSGAFG00000007387	si:dkey-85a20.4	79	46.201	ENSPSIG00000010699	TARBP1	99	46.278	Pelodiscus_sinensis
ENSGAFG00000007387	si:dkey-85a20.4	85	44.017	ENSPEMG00000006888	Tarbp1	92	44.071	Peromyscus_maniculatus_bairdii
ENSGAFG00000007387	si:dkey-85a20.4	76	69.849	ENSPCIG00000029710	TARBP1	98	69.849	Phascolarctos_cinereus
ENSGAFG00000007387	si:dkey-85a20.4	86	92.571	ENSPFOG00000013020	si:dkey-85a20.4	100	92.571	Poecilia_formosa
ENSGAFG00000007387	si:dkey-85a20.4	100	93.604	ENSPLAG00000006044	si:dkey-85a20.4	100	93.604	Poecilia_latipinna
ENSGAFG00000007387	si:dkey-85a20.4	100	93.665	ENSPMEG00000017857	si:dkey-85a20.4	100	93.665	Poecilia_mexicana
ENSGAFG00000007387	si:dkey-85a20.4	100	93.050	ENSPREG00000022753	si:dkey-85a20.4	100	93.050	Poecilia_reticulata
ENSGAFG00000007387	si:dkey-85a20.4	77	44.797	ENSPPYG00000000102	TARBP1	84	45.150	Pongo_abelii
ENSGAFG00000007387	si:dkey-85a20.4	67	76.316	ENSPCAG00000004808	TARBP1	72	76.316	Procavia_capensis
ENSGAFG00000007387	si:dkey-85a20.4	85	43.201	ENSPCOG00000005666	TARBP1	94	41.169	Propithecus_coquereli
ENSGAFG00000007387	si:dkey-85a20.4	85	39.118	ENSPVAG00000014798	TARBP1	86	39.118	Pteropus_vampyrus
ENSGAFG00000007387	si:dkey-85a20.4	99	70.297	ENSPNYG00000019135	si:dkey-85a20.4	99	70.297	Pundamilia_nyererei
ENSGAFG00000007387	si:dkey-85a20.4	93	40.853	ENSRNOG00000053574	Tarbp1	95	40.853	Rattus_norvegicus
ENSGAFG00000007387	si:dkey-85a20.4	85	42.289	ENSRBIG00000043362	TARBP1	94	42.191	Rhinopithecus_bieti
ENSGAFG00000007387	si:dkey-85a20.4	85	44.642	ENSRROG00000029527	TARBP1	90	44.713	Rhinopithecus_roxellana
ENSGAFG00000007387	si:dkey-85a20.4	83	44.982	ENSSBOG00000034503	TARBP1	96	45.268	Saimiri_boliviensis_boliviensis
ENSGAFG00000007387	si:dkey-85a20.4	83	44.873	ENSSHAG00000000013	TARBP1	99	44.873	Sarcophilus_harrisii
ENSGAFG00000007387	si:dkey-85a20.4	90	57.565	ENSSFOG00015002660	si:dkey-85a20.4	97	58.584	Scleropages_formosus
ENSGAFG00000007387	si:dkey-85a20.4	99	68.841	ENSSMAG00000007081	si:dkey-85a20.4	99	68.882	Scophthalmus_maximus
ENSGAFG00000007387	si:dkey-85a20.4	100	69.675	ENSSDUG00000023566	si:dkey-85a20.4	100	69.736	Seriola_dumerili
ENSGAFG00000007387	si:dkey-85a20.4	99	73.383	ENSSLDG00000020200	si:dkey-85a20.4	99	73.567	Seriola_lalandi_dorsalis
ENSGAFG00000007387	si:dkey-85a20.4	76	58.581	ENSSARG00000012207	TARBP1	76	58.581	Sorex_araneus
ENSGAFG00000007387	si:dkey-85a20.4	86	44.147	ENSSPUG00000015364	TARBP1	99	41.344	Sphenodon_punctatus
ENSGAFG00000007387	si:dkey-85a20.4	99	75.199	ENSSPAG00000007213	si:dkey-85a20.4	99	75.214	Stegastes_partitus
ENSGAFG00000007387	si:dkey-85a20.4	85	44.554	ENSSSCG00000010160	TARBP1	99	45.280	Sus_scrofa
ENSGAFG00000007387	si:dkey-85a20.4	80	46.009	ENSTGUG00000010214	TARBP1	100	46.009	Taeniopygia_guttata
ENSGAFG00000007387	si:dkey-85a20.4	94	62.647	ENSTNIG00000016586	si:dkey-85a20.4	99	68.787	Tetraodon_nigroviridis
ENSGAFG00000007387	si:dkey-85a20.4	79	40.520	ENSTTRG00000008707	TARBP1	85	40.926	Tursiops_truncatus
ENSGAFG00000007387	si:dkey-85a20.4	80	44.336	ENSUMAG00000006730	TARBP1	97	44.453	Ursus_maritimus
ENSGAFG00000007387	si:dkey-85a20.4	63	73.404	ENSVPAG00000007665	TARBP1	73	73.404	Vicugna_pacos
ENSGAFG00000007387	si:dkey-85a20.4	83	45.119	ENSVVUG00000007460	TARBP1	96	44.910	Vulpes_vulpes
ENSGAFG00000007387	si:dkey-85a20.4	83	43.001	ENSXETG00000016224	tarbp1	99	43.001	Xenopus_tropicalis
ENSGAFG00000007387	si:dkey-85a20.4	84	87.613	ENSXCOG00000011779	si:dkey-85a20.4	100	87.871	Xiphophorus_couchianus
ENSGAFG00000007387	si:dkey-85a20.4	64	96.374	ENSXMAG00000009600	si:dkey-85a20.4	100	96.374	Xiphophorus_maculatus