EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000007442 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4255 bases
Position: chrNHOQ01001578.1:7437877-7442131
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011002	Sua5_yciO_yrdC	PF01300.18	4.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011115	-	2499	-	ENSGAFP00000011002	832 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000007442	si:ch211-153b23.4	72	30.560	ENSGAFG00000007455	si:ch211-153b23.3	69	30.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007442	si:ch211-153b23.4	87	82.967	ENSAPOG00000006144	si:ch211-153b23.4	83	84.011	Acanthochromis_polyacanthus
ENSGAFG00000007442	si:ch211-153b23.4	93	79.974	ENSAPOG00000006178	si:ch211-153b23.4	83	84.129	Acanthochromis_polyacanthus
ENSGAFG00000007442	si:ch211-153b23.4	89	83.580	ENSACIG00000006997	si:ch211-153b23.4	87	83.580	Amphilophus_citrinellus
ENSGAFG00000007442	si:ch211-153b23.4	90	78.371	ENSAOCG00000010999	si:ch211-153b23.4	91	78.371	Amphiprion_ocellaris
ENSGAFG00000007442	si:ch211-153b23.4	57	31.211	ENSAOCG00000010974	si:ch211-153b23.3	53	31.185	Amphiprion_ocellaris
ENSGAFG00000007442	si:ch211-153b23.4	90	79.573	ENSAPEG00000014665	si:ch211-153b23.4	88	79.573	Amphiprion_percula
ENSGAFG00000007442	si:ch211-153b23.4	57	30.579	ENSAPEG00000014700	si:ch211-153b23.3	53	30.544	Amphiprion_percula
ENSGAFG00000007442	si:ch211-153b23.4	93	82.300	ENSATEG00000004948	si:ch211-153b23.4	88	82.300	Anabas_testudineus
ENSGAFG00000007442	si:ch211-153b23.4	93	58.568	ENSAPLG00000013596	-	94	58.312	Anas_platyrhynchos
ENSGAFG00000007442	si:ch211-153b23.4	93	80.051	ENSACLG00000005471	si:ch211-153b23.4	88	80.051	Astatotilapia_calliptera
ENSGAFG00000007442	si:ch211-153b23.4	90	71.921	ENSAMXG00000013879	si:ch211-153b23.4	88	71.733	Astyanax_mexicanus
ENSGAFG00000007442	si:ch211-153b23.4	93	77.778	ENSCSEG00000014838	si:ch211-153b23.4	92	77.778	Cynoglossus_semilaevis
ENSGAFG00000007442	si:ch211-153b23.4	90	90.969	ENSCVAG00000021145	si:ch211-153b23.4	93	90.909	Cyprinodon_variegatus
ENSGAFG00000007442	si:ch211-153b23.4	93	68.041	ENSDARG00000077169	si:ch211-153b23.4	88	67.139	Danio_rerio
ENSGAFG00000007442	si:ch211-153b23.4	93	69.526	ENSELUG00000004961	si:ch211-153b23.4	88	69.526	Esox_lucius
ENSGAFG00000007442	si:ch211-153b23.4	92	55.253	ENSFALG00000011343	-	86	55.792	Ficedula_albicollis
ENSGAFG00000007442	si:ch211-153b23.4	90	89.788	ENSFHEG00000010001	si:ch211-153b23.4	94	89.720	Fundulus_heteroclitus
ENSGAFG00000007442	si:ch211-153b23.4	78	95.833	ENSFHEG00000009888	si:ch211-153b23.4	73	95.833	Fundulus_heteroclitus
ENSGAFG00000007442	si:ch211-153b23.4	93	79.587	ENSGACG00000018253	si:ch211-153b23.4	88	79.867	Gasterosteus_aculeatus
ENSGAFG00000007442	si:ch211-153b23.4	77	63.369	ENSGAGG00000024601	-	87	63.369	Gopherus_agassizii
ENSGAFG00000007442	si:ch211-153b23.4	78	81.748	ENSHBUG00000000013	si:ch211-153b23.4	86	81.748	Haplochromis_burtoni
ENSGAFG00000007442	si:ch211-153b23.4	92	70.817	ENSIPUG00000015205	si:ch211-153b23.4	89	69.814	Ictalurus_punctatus
ENSGAFG00000007442	si:ch211-153b23.4	93	85.271	ENSKMAG00000006829	si:ch211-153b23.4	95	85.271	Kryptolebias_marmoratus
ENSGAFG00000007442	si:ch211-153b23.4	93	85.161	ENSKMAG00000006919	-	88	85.161	Kryptolebias_marmoratus
ENSGAFG00000007442	si:ch211-153b23.4	93	81.654	ENSLBEG00000026309	si:ch211-153b23.4	89	81.654	Labrus_bergylta
ENSGAFG00000007442	si:ch211-153b23.4	93	62.197	ENSLACG00000017592	si:ch211-153b23.4	94	62.197	Latimeria_chalumnae
ENSGAFG00000007442	si:ch211-153b23.4	89	83.802	ENSMAMG00000009277	si:ch211-153b23.4	90	83.802	Mastacembelus_armatus
ENSGAFG00000007442	si:ch211-153b23.4	90	83.554	ENSMAMG00000009358	si:ch211-153b23.4	92	83.445	Mastacembelus_armatus
ENSGAFG00000007442	si:ch211-153b23.4	90	80.239	ENSMZEG00005011433	si:ch211-153b23.4	91	80.107	Maylandia_zebra
ENSGAFG00000007442	si:ch211-153b23.4	93	58.696	ENSMGAG00000005478	-	94	58.312	Meleagris_gallopavo
ENSGAFG00000007442	si:ch211-153b23.4	90	81.034	ENSMMOG00000004425	si:ch211-153b23.4	93	80.908	Mola_mola
ENSGAFG00000007442	si:ch211-153b23.4	90	80.106	ENSNBRG00000013392	si:ch211-153b23.4	94	79.973	Neolamprologus_brichardi
ENSGAFG00000007442	si:ch211-153b23.4	93	80.233	ENSONIG00000017875	si:ch211-153b23.4	89	80.233	Oreochromis_niloticus
ENSGAFG00000007442	si:ch211-153b23.4	93	80.362	ENSORLG00000006169	si:ch211-153b23.4	88	80.362	Oryzias_latipes
ENSGAFG00000007442	si:ch211-153b23.4	93	80.879	ENSORLG00020009905	si:ch211-153b23.4	88	80.879	Oryzias_latipes_hni
ENSGAFG00000007442	si:ch211-153b23.4	93	80.491	ENSORLG00015003709	si:ch211-153b23.4	88	80.491	Oryzias_latipes_hsok
ENSGAFG00000007442	si:ch211-153b23.4	93	80.491	ENSOMEG00000007682	si:ch211-153b23.4	88	80.491	Oryzias_melastigma
ENSGAFG00000007442	si:ch211-153b23.4	93	69.320	ENSPKIG00000025681	si:ch211-153b23.4	90	69.320	Paramormyrops_kingsleyae
ENSGAFG00000007442	si:ch211-153b23.4	92	66.106	ENSPKIG00000014429	si:ch211-153b23.4	89	66.178	Paramormyrops_kingsleyae
ENSGAFG00000007442	si:ch211-153b23.4	88	63.144	ENSPMGG00000001313	si:ch211-153b23.4	80	62.845	Periophthalmus_magnuspinnatus
ENSGAFG00000007442	si:ch211-153b23.4	57	32.854	ENSPFOG00000012289	si:ch211-153b23.3	54	33.265	Poecilia_formosa
ENSGAFG00000007442	si:ch211-153b23.4	75	96.172	ENSPFOG00000012164	si:ch211-153b23.4	88	96.172	Poecilia_formosa
ENSGAFG00000007442	si:ch211-153b23.4	90	95.225	ENSPLAG00000016295	si:ch211-153b23.4	93	95.194	Poecilia_latipinna
ENSGAFG00000007442	si:ch211-153b23.4	57	32.854	ENSPMEG00000008884	si:ch211-153b23.3	54	33.265	Poecilia_mexicana
ENSGAFG00000007442	si:ch211-153b23.4	89	93.432	ENSPMEG00000007538	si:ch211-153b23.4	91	92.091	Poecilia_mexicana
ENSGAFG00000007442	si:ch211-153b23.4	90	80.106	ENSPNYG00000000250	si:ch211-153b23.4	91	79.973	Pundamilia_nyererei
ENSGAFG00000007442	si:ch211-153b23.4	93	71.538	ENSPNAG00000019554	si:ch211-153b23.4	88	71.538	Pygocentrus_nattereri
ENSGAFG00000007442	si:ch211-153b23.4	92	66.837	ENSSFOG00015003920	-	89	66.837	Scleropages_formosus
ENSGAFG00000007442	si:ch211-153b23.4	93	70.876	ENSSFOG00015010891	si:ch211-153b23.4	89	70.876	Scleropages_formosus
ENSGAFG00000007442	si:ch211-153b23.4	93	81.525	ENSSMAG00000010067	si:ch211-153b23.4	89	81.525	Scophthalmus_maximus
ENSGAFG00000007442	si:ch211-153b23.4	80	81.696	ENSSDUG00000006931	si:ch211-153b23.4	92	81.696	Seriola_dumerili
ENSGAFG00000007442	si:ch211-153b23.4	79	81.991	ENSSDUG00000006842	si:ch211-153b23.4	84	81.991	Seriola_dumerili
ENSGAFG00000007442	si:ch211-153b23.4	90	82.095	ENSSDUG00000006671	si:ch211-153b23.4	93	81.976	Seriola_dumerili
ENSGAFG00000007442	si:ch211-153b23.4	92	58.398	ENSTGUG00000005499	-	92	58.355	Taeniopygia_guttata
ENSGAFG00000007442	si:ch211-153b23.4	90	78.675	ENSTRUG00000003247	si:ch211-153b23.4	93	78.533	Takifugu_rubripes
ENSGAFG00000007442	si:ch211-153b23.4	93	76.864	ENSTNIG00000008958	si:ch211-153b23.4	94	76.864	Tetraodon_nigroviridis
ENSGAFG00000007442	si:ch211-153b23.4	92	54.010	ENSXETG00000004489	-	85	54.370	Xenopus_tropicalis
ENSGAFG00000007442	si:ch211-153b23.4	90	96.933	ENSXMAG00000009416	-	88	96.933	Xiphophorus_maculatus
ENSGAFG00000007442	si:ch211-153b23.4	93	96.770	ENSXMAG00000021388	si:ch211-153b23.4	93	96.770	Xiphophorus_maculatus