EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000007455 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3522 bases
Position: chrNHOQ01001578.1:7448134-7451655
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011019	Sua5_yciO_yrdC	PF01300.18	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011132	-	2646	-	ENSGAFP00000011019	881 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000007455	si:ch211-153b23.3	69	30.560	ENSGAFG00000007442	si:ch211-153b23.4	72	30.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007455	si:ch211-153b23.3	59	32.143	ENSAPOG00000006178	si:ch211-153b23.4	59	32.143	Acanthochromis_polyacanthus
ENSGAFG00000007455	si:ch211-153b23.3	59	32.143	ENSAPOG00000006144	si:ch211-153b23.4	60	32.143	Acanthochromis_polyacanthus
ENSGAFG00000007455	si:ch211-153b23.3	99	73.416	ENSACIG00000006968	si:ch211-153b23.3	100	73.416	Amphilophus_citrinellus
ENSGAFG00000007455	si:ch211-153b23.3	99	83.805	ENSAOCG00000010974	si:ch211-153b23.3	100	83.805	Amphiprion_ocellaris
ENSGAFG00000007455	si:ch211-153b23.3	99	83.465	ENSAPEG00000014700	si:ch211-153b23.3	100	83.465	Amphiprion_percula
ENSGAFG00000007455	si:ch211-153b23.3	59	31.870	ENSAPEG00000014665	si:ch211-153b23.4	60	31.870	Amphiprion_percula
ENSGAFG00000007455	si:ch211-153b23.3	99	79.615	ENSATEG00000004956	si:ch211-153b23.3	100	79.615	Anabas_testudineus
ENSGAFG00000007455	si:ch211-153b23.3	99	79.909	ENSACLG00000005894	si:ch211-153b23.3	100	79.909	Astatotilapia_calliptera
ENSGAFG00000007455	si:ch211-153b23.3	59	33.648	ENSACLG00000005471	si:ch211-153b23.4	58	33.648	Astatotilapia_calliptera
ENSGAFG00000007455	si:ch211-153b23.3	99	71.026	ENSAMXG00000038564	si:ch211-153b23.3	99	71.510	Astyanax_mexicanus
ENSGAFG00000007455	si:ch211-153b23.3	77	30.825	ENSAMXG00000013879	si:ch211-153b23.4	77	30.825	Astyanax_mexicanus
ENSGAFG00000007455	si:ch211-153b23.3	99	78.320	ENSCSEG00000014853	si:ch211-153b23.3	100	78.320	Cynoglossus_semilaevis
ENSGAFG00000007455	si:ch211-153b23.3	74	31.231	ENSCVAG00000021145	si:ch211-153b23.4	80	31.231	Cyprinodon_variegatus
ENSGAFG00000007455	si:ch211-153b23.3	99	91.002	ENSCVAG00000021124	si:ch211-153b23.3	100	91.002	Cyprinodon_variegatus
ENSGAFG00000007455	si:ch211-153b23.3	100	70.964	ENSDARG00000104919	si:ch211-153b23.3	100	70.964	Danio_rerio
ENSGAFG00000007455	si:ch211-153b23.3	81	83.036	ENSELUG00000004912	si:ch211-153b23.3	99	83.036	Esox_lucius
ENSGAFG00000007455	si:ch211-153b23.3	74	30.317	ENSFHEG00000010001	si:ch211-153b23.4	81	30.317	Fundulus_heteroclitus
ENSGAFG00000007455	si:ch211-153b23.3	100	91.487	ENSFHEG00000010030	si:ch211-153b23.3	100	91.487	Fundulus_heteroclitus
ENSGAFG00000007455	si:ch211-153b23.3	99	80.136	ENSHBUG00000001760	si:ch211-153b23.3	100	80.136	Haplochromis_burtoni
ENSGAFG00000007455	si:ch211-153b23.3	55	33.534	ENSHBUG00000000013	si:ch211-153b23.4	64	33.534	Haplochromis_burtoni
ENSGAFG00000007455	si:ch211-153b23.3	100	71.008	ENSIPUG00000015213	si:ch211-153b23.3	100	71.008	Ictalurus_punctatus
ENSGAFG00000007455	si:ch211-153b23.3	72	31.394	ENSIPUG00000015205	si:ch211-153b23.4	75	31.394	Ictalurus_punctatus
ENSGAFG00000007455	si:ch211-153b23.3	72	30.757	ENSKMAG00000006829	si:ch211-153b23.4	77	30.757	Kryptolebias_marmoratus
ENSGAFG00000007455	si:ch211-153b23.3	72	30.971	ENSKMAG00000006919	-	72	30.971	Kryptolebias_marmoratus
ENSGAFG00000007455	si:ch211-153b23.3	100	84.222	ENSKMAG00000006792	si:ch211-153b23.3	100	84.222	Kryptolebias_marmoratus
ENSGAFG00000007455	si:ch211-153b23.3	100	79.594	ENSLBEG00000026324	si:ch211-153b23.3	100	79.594	Labrus_bergylta
ENSGAFG00000007455	si:ch211-153b23.3	59	32.190	ENSLBEG00000026309	si:ch211-153b23.4	59	32.190	Labrus_bergylta
ENSGAFG00000007455	si:ch211-153b23.3	94	57.533	ENSLACG00000005800	-	99	58.026	Latimeria_chalumnae
ENSGAFG00000007455	si:ch211-153b23.3	84	53.061	ENSLOCG00000015063	si:ch211-153b23.3	98	53.061	Lepisosteus_oculatus
ENSGAFG00000007455	si:ch211-153b23.3	99	81.519	ENSMAMG00000009328	si:ch211-153b23.3	100	81.519	Mastacembelus_armatus
ENSGAFG00000007455	si:ch211-153b23.3	72	30.139	ENSMAMG00000009358	si:ch211-153b23.4	77	30.139	Mastacembelus_armatus
ENSGAFG00000007455	si:ch211-153b23.3	72	30.354	ENSMAMG00000009277	si:ch211-153b23.4	76	30.354	Mastacembelus_armatus
ENSGAFG00000007455	si:ch211-153b23.3	59	33.459	ENSMZEG00005011433	si:ch211-153b23.4	63	33.459	Maylandia_zebra
ENSGAFG00000007455	si:ch211-153b23.3	99	80.023	ENSMZEG00005011450	si:ch211-153b23.3	100	80.023	Maylandia_zebra
ENSGAFG00000007455	si:ch211-153b23.3	99	79.887	ENSMMOG00000004436	si:ch211-153b23.3	100	79.887	Mola_mola
ENSGAFG00000007455	si:ch211-153b23.3	59	33.712	ENSMMOG00000004425	si:ch211-153b23.4	64	33.712	Mola_mola
ENSGAFG00000007455	si:ch211-153b23.3	99	80.250	ENSNBRG00000013370	si:ch211-153b23.3	100	80.250	Neolamprologus_brichardi
ENSGAFG00000007455	si:ch211-153b23.3	58	33.333	ENSNBRG00000013392	si:ch211-153b23.4	65	33.333	Neolamprologus_brichardi
ENSGAFG00000007455	si:ch211-153b23.3	59	33.459	ENSONIG00000017875	si:ch211-153b23.4	59	33.459	Oreochromis_niloticus
ENSGAFG00000007455	si:ch211-153b23.3	99	79.775	ENSORLG00000006161	si:ch211-153b23.3	99	79.775	Oryzias_latipes
ENSGAFG00000007455	si:ch211-153b23.3	59	33.017	ENSORLG00000006169	si:ch211-153b23.4	59	33.017	Oryzias_latipes
ENSGAFG00000007455	si:ch211-153b23.3	97	80.913	ENSORLG00020000910	si:ch211-153b23.3	100	80.913	Oryzias_latipes_hni
ENSGAFG00000007455	si:ch211-153b23.3	59	33.586	ENSORLG00015003709	si:ch211-153b23.4	59	33.586	Oryzias_latipes_hsok
ENSGAFG00000007455	si:ch211-153b23.3	97	80.374	ENSORLG00015003698	si:ch211-153b23.3	100	80.374	Oryzias_latipes_hsok
ENSGAFG00000007455	si:ch211-153b23.3	99	80.540	ENSOMEG00000007661	si:ch211-153b23.3	99	80.540	Oryzias_melastigma
ENSGAFG00000007455	si:ch211-153b23.3	99	49.779	ENSPKIG00000021029	-	99	49.779	Paramormyrops_kingsleyae
ENSGAFG00000007455	si:ch211-153b23.3	97	72.145	ENSPKIG00000022450	si:ch211-153b23.3	100	72.145	Paramormyrops_kingsleyae
ENSGAFG00000007455	si:ch211-153b23.3	59	32.331	ENSPKIG00000025681	si:ch211-153b23.4	60	32.331	Paramormyrops_kingsleyae
ENSGAFG00000007455	si:ch211-153b23.3	82	79.592	ENSPMGG00000001311	si:ch211-153b23.3	99	82.979	Periophthalmus_magnuspinnatus
ENSGAFG00000007455	si:ch211-153b23.3	100	95.045	ENSPFOG00000012289	si:ch211-153b23.3	100	95.045	Poecilia_formosa
ENSGAFG00000007455	si:ch211-153b23.3	74	31.278	ENSPFOG00000012164	si:ch211-153b23.4	91	31.278	Poecilia_formosa
ENSGAFG00000007455	si:ch211-153b23.3	74	31.373	ENSPLAG00000016295	si:ch211-153b23.4	80	31.373	Poecilia_latipinna
ENSGAFG00000007455	si:ch211-153b23.3	99	96.123	ENSPLAG00000016320	si:ch211-153b23.3	100	96.123	Poecilia_latipinna
ENSGAFG00000007455	si:ch211-153b23.3	100	96.141	ENSPMEG00000008884	si:ch211-153b23.3	100	96.141	Poecilia_mexicana
ENSGAFG00000007455	si:ch211-153b23.3	58	34.100	ENSPMEG00000007538	si:ch211-153b23.4	63	34.100	Poecilia_mexicana
ENSGAFG00000007455	si:ch211-153b23.3	99	79.909	ENSPNYG00000000251	si:ch211-153b23.3	100	79.909	Pundamilia_nyererei
ENSGAFG00000007455	si:ch211-153b23.3	59	33.459	ENSPNYG00000000250	si:ch211-153b23.4	63	33.459	Pundamilia_nyererei
ENSGAFG00000007455	si:ch211-153b23.3	100	73.129	ENSPNAG00000019592	si:ch211-153b23.3	100	73.129	Pygocentrus_nattereri
ENSGAFG00000007455	si:ch211-153b23.3	59	33.459	ENSPNAG00000019554	si:ch211-153b23.4	58	33.459	Pygocentrus_nattereri
ENSGAFG00000007455	si:ch211-153b23.3	68	51.200	ENSSFOG00015009030	-	96	51.200	Scleropages_formosus
ENSGAFG00000007455	si:ch211-153b23.3	100	71.732	ENSSFOG00015010910	si:ch211-153b23.3	100	71.732	Scleropages_formosus
ENSGAFG00000007455	si:ch211-153b23.3	59	33.208	ENSSFOG00015010891	si:ch211-153b23.4	60	33.208	Scleropages_formosus
ENSGAFG00000007455	si:ch211-153b23.3	99	82.232	ENSSMAG00000005446	si:ch211-153b23.3	100	82.232	Scophthalmus_maximus
ENSGAFG00000007455	si:ch211-153b23.3	72	30.093	ENSSDUG00000006671	si:ch211-153b23.4	78	30.093	Seriola_dumerili
ENSGAFG00000007455	si:ch211-153b23.3	99	83.239	ENSSLDG00000008629	si:ch211-153b23.3	100	83.239	Seriola_lalandi_dorsalis
ENSGAFG00000007455	si:ch211-153b23.3	99	75.830	ENSTRUG00000020530	si:ch211-153b23.3	100	76.060	Takifugu_rubripes
ENSGAFG00000007455	si:ch211-153b23.3	93	80.669	ENSTNIG00000008962	si:ch211-153b23.3	99	80.669	Tetraodon_nigroviridis
ENSGAFG00000007455	si:ch211-153b23.3	59	34.026	ENSXMAG00000021388	si:ch211-153b23.4	62	34.026	Xiphophorus_maculatus
ENSGAFG00000007455	si:ch211-153b23.3	100	96.595	ENSXMAG00000029318	si:ch211-153b23.3	100	96.595	Xiphophorus_maculatus
ENSGAFG00000007455	si:ch211-153b23.3	59	34.405	ENSXMAG00000009416	-	61	34.405	Xiphophorus_maculatus