EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000007528 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5031 bases
Position: chrNHOQ01001934.1:151513-156543
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011107	zf-C2H2	PF00096.26	4.5e-13	1	3
ENSGAFP00000011107	zf-C2H2	PF00096.26	4.5e-13	2	3
ENSGAFP00000011107	zf-C2H2	PF00096.26	4.5e-13	3	3
ENSGAFP00000011107	zf-met	PF12874.7	1.5e-09	1	2
ENSGAFP00000011107	zf-met	PF12874.7	1.5e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011220	-	729	-	ENSGAFP00000011107	242 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000007528	-	61	41.935	ENSGAFG00000003108	-	75	34.815
ENSGAFG00000007528	-	68	42.202	ENSGAFG00000001402	-	69	42.202
ENSGAFG00000007528	-	58	42.202	ENSGAFG00000013457	-	57	42.202
ENSGAFG00000007528	-	58	44.118	ENSGAFG00000013452	-	67	44.118
ENSGAFG00000007528	-	58	48.000	ENSGAFG00000021131	-	80	48.000
ENSGAFG00000007528	-	78	53.488	ENSGAFG00000012035	-	85	47.200
ENSGAFG00000007528	-	63	50.769	ENSGAFG00000018302	-	70	50.769
ENSGAFG00000007528	-	68	43.478	ENSGAFG00000013624	-	65	43.478
ENSGAFG00000007528	-	68	48.387	ENSGAFG00000021140	-	99	48.387
ENSGAFG00000007528	-	75	43.200	ENSGAFG00000008226	-	75	43.200
ENSGAFG00000007528	-	59	46.491	ENSGAFG00000013048	-	66	46.491
ENSGAFG00000007528	-	55	45.161	ENSGAFG00000012987	-	66	45.161
ENSGAFG00000007528	-	62	44.860	ENSGAFG00000013616	-	72	44.860
ENSGAFG00000007528	-	61	43.011	ENSGAFG00000001156	-	60	43.011
ENSGAFG00000007528	-	70	43.077	ENSGAFG00000013408	-	90	42.029
ENSGAFG00000007528	-	52	48.148	ENSGAFG00000016587	-	85	48.148
ENSGAFG00000007528	-	62	46.465	ENSGAFG00000020499	-	64	46.465
ENSGAFG00000007528	-	67	40.659	ENSGAFG00000009650	-	69	40.659
ENSGAFG00000007528	-	55	48.113	ENSGAFG00000007104	-	58	48.113
ENSGAFG00000007528	-	59	48.837	ENSGAFG00000013006	-	67	48.837
ENSGAFG00000007528	-	52	48.958	ENSGAFG00000013053	-	50	48.958
ENSGAFG00000007528	-	60	42.202	ENSGAFG00000012977	-	87	42.202
ENSGAFG00000007528	-	53	45.545	ENSGAFG00000005337	-	71	45.545
ENSGAFG00000007528	-	62	43.243	ENSGAFG00000014369	-	96	43.243
ENSGAFG00000007528	-	51	40.367	ENSGAFG00000014362	-	54	40.367
ENSGAFG00000007528	-	54	41.284	ENSGAFG00000013430	-	84	41.284
ENSGAFG00000007528	-	64	36.774	ENSGAFG00000013438	-	91	38.571
ENSGAFG00000007528	-	60	47.619	ENSGAFG00000018820	-	72	47.619
ENSGAFG00000007528	-	68	42.991	ENSGAFG00000010637	-	76	42.991
ENSGAFG00000007528	-	70	39.640	ENSGAFG00000014097	-	77	39.640
ENSGAFG00000007528	-	50	40.541	ENSGAFG00000016981	-	74	40.541
ENSGAFG00000007528	-	50	44.037	ENSGAFG00000018422	-	51	44.037
ENSGAFG00000007528	-	62	44.565	ENSGAFG00000021427	snai2	51	44.565
ENSGAFG00000007528	-	61	46.018	ENSGAFG00000013055	-	69	46.018
ENSGAFG00000007528	-	66	40.541	ENSGAFG00000001481	-	79	40.541
ENSGAFG00000007528	-	56	41.176	ENSGAFG00000018508	-	52	41.176
ENSGAFG00000007528	-	55	34.091	ENSGAFG00000003119	-	69	34.091
ENSGAFG00000007528	-	80	44.444	ENSGAFG00000014413	-	84	44.444
ENSGAFG00000007528	-	62	40.845	ENSGAFG00000014410	-	84	40.845
ENSGAFG00000007528	-	55	43.750	ENSGAFG00000014419	-	60	43.750
ENSGAFG00000007528	-	56	43.750	ENSGAFG00000008231	-	68	43.750
ENSGAFG00000007528	-	64	50.000	ENSGAFG00000011326	-	98	44.860
ENSGAFG00000007528	-	52	41.441	ENSGAFG00000020501	-	51	41.441
ENSGAFG00000007528	-	62	44.860	ENSGAFG00000020509	-	94	44.860
ENSGAFG00000007528	-	53	43.750	ENSGAFG00000013396	-	75	43.750
ENSGAFG00000007528	-	62	44.860	ENSGAFG00000016595	-	85	47.706
ENSGAFG00000007528	-	60	45.794	ENSGAFG00000011906	-	59	45.794
ENSGAFG00000007528	-	61	40.625	ENSGAFG00000019233	prdm5	67	40.625
ENSGAFG00000007528	-	58	38.806	ENSGAFG00000016322	-	50	38.806
ENSGAFG00000007528	-	52	38.043	ENSGAFG00000007532	-	71	38.043
ENSGAFG00000007528	-	63	42.202	ENSGAFG00000013491	-	67	42.202
ENSGAFG00000007528	-	62	51.515	ENSGAFG00000007098	-	83	51.515
ENSGAFG00000007528	-	67	47.664	ENSGAFG00000011288	-	78	47.664
ENSGAFG00000007528	-	58	50.000	ENSGAFG00000011999	-	73	50.000
ENSGAFG00000007528	-	86	42.647	ENSGAFG00000007110	-	79	42.647
ENSGAFG00000007528	-	79	44.944	ENSGAFG00000014088	-	70	44.944
ENSGAFG00000007528	-	57	47.414	ENSGAFG00000013069	-	81	47.414
ENSGAFG00000007528	-	52	45.536	ENSGAFG00000013066	-	67	45.536
ENSGAFG00000007528	-	67	36.607	ENSGAFG00000008457	zbtb41	68	36.607
ENSGAFG00000007528	-	58	41.414	ENSGAFG00000012945	-	56	44.615
ENSGAFG00000007528	-	87	42.727	ENSGAFG00000016347	znf668	83	42.727
ENSGAFG00000007528	-	69	46.957	ENSGAFG00000013000	-	76	46.957
ENSGAFG00000007528	-	75	43.636	ENSGAFG00000002659	-	66	41.121
ENSGAFG00000007528	-	78	37.815	ENSGAFG00000021891	znf319b	76	43.750
ENSGAFG00000007528	-	64	55.319	ENSGAFG00000021132	-	65	55.319
ENSGAFG00000007528	-	65	47.222	ENSGAFG00000021139	-	89	47.222
ENSGAFG00000007528	-	66	47.727	ENSGAFG00000013116	-	61	47.727
ENSGAFG00000007528	-	86	43.617	ENSGAFG00000012934	-	75	43.617
ENSGAFG00000007528	-	53	45.370	ENSGAFG00000011174	-	61	45.370
ENSGAFG00000007528	-	52	52.830	ENSGAFG00000013019	-	77	43.636
ENSGAFG00000007528	-	82	50.926	ENSGAFG00000013934	-	99	50.926
ENSGAFG00000007528	-	83	46.789	ENSGAFG00000018659	-	99	46.789
ENSGAFG00000007528	-	52	41.284	ENSGAFG00000013605	-	94	41.284
ENSGAFG00000007528	-	50	41.441	ENSGAFG00000013471	-	69	41.441
ENSGAFG00000007528	-	77	56.098	ENSGAFG00000011965	-	84	56.098
ENSGAFG00000007528	-	63	48.598	ENSGAFG00000013363	-	77	48.598
ENSGAFG00000007528	-	52	40.196	ENSGAFG00000003059	gfi1b	72	40.196
ENSGAFG00000007528	-	73	54.762	ENSGAFG00000008204	-	66	54.762
ENSGAFG00000007528	-	57	44.860	ENSGAFG00000000037	-	64	44.860
ENSGAFG00000007528	-	55	44.037	ENSGAFG00000017761	-	82	44.037
ENSGAFG00000007528	-	79	46.729	ENSGAFG00000011884	-	99	46.729
ENSGAFG00000007528	-	77	51.613	ENSGAFG00000003150	-	82	44.737
ENSGAFG00000007528	-	53	42.268	ENSGAFG00000018663	-	53	42.268
ENSGAFG00000007528	-	60	39.773	ENSGAFG00000005321	zbtb47b	78	39.773
ENSGAFG00000007528	-	68	42.202	ENSGAFG00000013911	-	97	42.202
ENSGAFG00000007528	-	82	41.441	ENSGAFG00000014188	-	94	44.444
ENSGAFG00000007528	-	85	57.143	ENSGAFG00000013677	-	82	57.143
ENSGAFG00000007528	-	78	46.250	ENSGAFG00000008274	-	96	44.144
ENSGAFG00000007528	-	57	46.237	ENSGAFG00000011290	-	57	46.237
ENSGAFG00000007528	-	63	41.837	ENSGAFG00000012953	-	71	41.837
ENSGAFG00000007528	-	53	52.381	ENSGAFG00000013969	-	94	43.902
ENSGAFG00000007528	-	52	49.231	ENSGAFG00000019072	-	80	47.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007528	-	56	48.235	ENSACIG00000004641	-	55	48.235	Amphilophus_citrinellus
ENSGAFG00000007528	-	60	45.588	ENSACIG00000007464	-	54	45.588	Amphilophus_citrinellus
ENSGAFG00000007528	-	67	33.333	ENSACIG00000006826	-	72	33.333	Amphilophus_citrinellus
ENSGAFG00000007528	-	60	36.697	ENSACIG00000017892	-	82	36.697	Amphilophus_citrinellus
ENSGAFG00000007528	-	69	43.925	ENSAPEG00000010013	-	64	43.925	Amphiprion_percula
ENSGAFG00000007528	-	64	65.789	ENSATEG00000018931	-	81	65.789	Anabas_testudineus
ENSGAFG00000007528	-	62	45.349	ENSACLG00000011658	-	86	45.349	Astatotilapia_calliptera
ENSGAFG00000007528	-	73	39.252	ENSACLG00000005694	-	60	39.252	Astatotilapia_calliptera
ENSGAFG00000007528	-	63	52.941	ENSCSEG00000010453	-	63	52.941	Cynoglossus_semilaevis
ENSGAFG00000007528	-	62	74.000	ENSCVAG00000003250	-	64	74.000	Cyprinodon_variegatus
ENSGAFG00000007528	-	62	51.515	ENSEBUG00000007931	-	61	51.515	Eptatretus_burgeri
ENSGAFG00000007528	-	73	39.252	ENSHBUG00000006656	-	74	39.252	Haplochromis_burtoni
ENSGAFG00000007528	-	56	52.174	ENSHCOG00000015497	-	77	52.174	Hippocampus_comes
ENSGAFG00000007528	-	50	50.877	ENSHCOG00000020670	-	72	50.877	Hippocampus_comes
ENSGAFG00000007528	-	52	49.123	ENSHCOG00000013489	-	94	49.123	Hippocampus_comes
ENSGAFG00000007528	-	64	35.052	ENSKMAG00000014184	-	65	35.052	Kryptolebias_marmoratus
ENSGAFG00000007528	-	68	51.613	ENSLBEG00000006161	-	78	51.613	Labrus_bergylta
ENSGAFG00000007528	-	55	70.796	ENSLBEG00000001132	-	69	70.796	Labrus_bergylta
ENSGAFG00000007528	-	52	34.286	ENSLBEG00000017424	-	95	34.286	Labrus_bergylta
ENSGAFG00000007528	-	71	42.202	ENSLOCG00000004208	-	99	39.560	Lepisosteus_oculatus
ENSGAFG00000007528	-	54	70.175	ENSMAMG00000017939	-	78	70.175	Mastacembelus_armatus
ENSGAFG00000007528	-	72	48.000	ENSMZEG00005013907	-	84	48.000	Maylandia_zebra
ENSGAFG00000007528	-	55	65.455	ENSMALG00000004279	-	80	65.455	Monopterus_albus
ENSGAFG00000007528	-	58	41.111	ENSONIG00000007967	-	54	41.111	Oreochromis_niloticus
ENSGAFG00000007528	-	58	43.220	ENSORLG00000021885	-	68	46.154	Oryzias_latipes
ENSGAFG00000007528	-	83	42.520	ENSORLG00000002268	-	84	42.520	Oryzias_latipes
ENSGAFG00000007528	-	58	43.478	ENSORLG00015018099	-	62	43.478	Oryzias_latipes_hsok
ENSGAFG00000007528	-	66	40.187	ENSPKIG00000005164	-	56	40.187	Paramormyrops_kingsleyae
ENSGAFG00000007528	-	74	49.541	ENSPMGG00000009571	-	80	49.541	Periophthalmus_magnuspinnatus
ENSGAFG00000007528	-	60	49.206	ENSPMGG00000002661	-	58	49.206	Periophthalmus_magnuspinnatus
ENSGAFG00000007528	-	73	42.683	ENSPMGG00000002455	-	95	42.683	Periophthalmus_magnuspinnatus
ENSGAFG00000007528	-	50	36.275	ENSPMAG00000002022	-	69	36.275	Petromyzon_marinus
ENSGAFG00000007528	-	52	36.364	ENSPMAG00000000839	-	88	36.364	Petromyzon_marinus
ENSGAFG00000007528	-	67	84.672	ENSPFOG00000018860	-	99	84.672	Poecilia_formosa
ENSGAFG00000007528	-	53	35.577	ENSPNAG00000005946	-	86	35.577	Pygocentrus_nattereri
ENSGAFG00000007528	-	55	40.404	ENSSFOG00015011531	-	78	40.404	Scleropages_formosus
ENSGAFG00000007528	-	53	43.636	ENSSMAG00000013291	-	88	45.000	Scophthalmus_maximus
ENSGAFG00000007528	-	54	32.903	ENSSLDG00000014436	-	65	41.975	Seriola_lalandi_dorsalis
ENSGAFG00000007528	-	63	44.860	ENSSPAG00000011544	-	50	44.860	Stegastes_partitus
ENSGAFG00000007528	-	57	45.652	ENSXETG00000012506	znf91	99	45.652	Xenopus_tropicalis
ENSGAFG00000007528	-	68	36.364	ENSXCOG00000003441	-	54	42.268	Xiphophorus_couchianus
ENSGAFG00000007528	-	55	46.479	ENSXCOG00000000254	-	63	46.479	Xiphophorus_couchianus
ENSGAFG00000007528	-	81	61.194	ENSXCOG00000020768	-	85	61.194	Xiphophorus_couchianus