EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000007546 (Gene tree)
Gene ID: -
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12427 bases
Position: chrNHOQ01002390.1:12115260-12127686
Accession: ZDB-GENE-101110-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011142	PseudoU_synth_1	PF01416.20	1.2e-33	1	2
ENSGAFP00000011142	PseudoU_synth_1	PF01416.20	1.2e-33	2	2
ENSGAFP00000011137	PseudoU_synth_1	PF01416.20	6.6e-32	1	1
ENSGAFP00000011132	PseudoU_synth_1	PF01416.20	1.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011255	-	1560	-	ENSGAFP00000011142	294 (aa)	-	-
ENSGAFT00000011245	-	1731	-	ENSGAFP00000011132	370 (aa)	-	-
ENSGAFT00000011250	-	1365	-	ENSGAFP00000011137	295 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007546	pusl1	95	51.071	ENSG00000169972	PUSL1	96	52.459	Homo_sapiens
ENSGAFG00000007546	pusl1	96	73.498	ENSAPOG00000016290	pusl1	95	73.498	Acanthochromis_polyacanthus
ENSGAFG00000007546	pusl1	95	49.643	ENSAMEG00000013752	PUSL1	91	49.643	Ailuropoda_melanoleuca
ENSGAFG00000007546	pusl1	93	75.547	ENSACIG00000015240	pusl1	100	75.547	Amphilophus_citrinellus
ENSGAFG00000007546	pusl1	96	72.340	ENSAOCG00000019419	pusl1	85	72.340	Amphiprion_ocellaris
ENSGAFG00000007546	pusl1	97	71.479	ENSAPEG00000005452	pusl1	95	71.731	Amphiprion_percula
ENSGAFG00000007546	pusl1	98	74.216	ENSATEG00000024154	pusl1	96	74.216	Anabas_testudineus
ENSGAFG00000007546	pusl1	94	51.986	ENSAPLG00000004946	PUSL1	92	51.986	Anas_platyrhynchos
ENSGAFG00000007546	pusl1	88	55.985	ENSACAG00000014111	PUSL1	98	55.985	Anolis_carolinensis
ENSGAFG00000007546	pusl1	93	52.174	ENSANAG00000037456	PUSL1	90	52.174	Aotus_nancymaae
ENSGAFG00000007546	pusl1	96	78.445	ENSACLG00000008675	pusl1	94	78.445	Astatotilapia_calliptera
ENSGAFG00000007546	pusl1	97	60.351	ENSAMXG00000044007	pusl1	99	59.926	Astyanax_mexicanus
ENSGAFG00000007546	pusl1	95	51.786	ENSBTAG00000007619	PUSL1	95	51.786	Bos_taurus
ENSGAFG00000007546	pusl1	93	51.812	ENSCJAG00000010972	PUSL1	90	51.812	Callithrix_jacchus
ENSGAFG00000007546	pusl1	95	48.929	ENSCAFG00000019291	PUSL1	91	48.929	Canis_familiaris
ENSGAFG00000007546	pusl1	99	46.026	ENSCAFG00020011568	PUSL1	98	46.026	Canis_lupus_dingo
ENSGAFG00000007546	pusl1	95	51.071	ENSCHIG00000012615	PUSL1	97	51.071	Capra_hircus
ENSGAFG00000007546	pusl1	94	49.462	ENSCPOG00000005149	PUSL1	90	49.462	Cavia_porcellus
ENSGAFG00000007546	pusl1	93	51.812	ENSCCAG00000027475	PUSL1	90	51.812	Cebus_capucinus
ENSGAFG00000007546	pusl1	95	51.071	ENSCATG00000018260	PUSL1	91	51.071	Cercocebus_atys
ENSGAFG00000007546	pusl1	95	50.714	ENSCLAG00000005232	PUSL1	91	50.714	Chinchilla_lanigera
ENSGAFG00000007546	pusl1	95	50.714	ENSCSAG00000000680	PUSL1	91	50.714	Chlorocebus_sabaeus
ENSGAFG00000007546	pusl1	95	54.122	ENSCPBG00000022621	PUSL1	95	54.122	Chrysemys_picta_bellii
ENSGAFG00000007546	pusl1	95	50.714	ENSCANG00000034373	PUSL1	91	50.714	Colobus_angolensis_palliatus
ENSGAFG00000007546	pusl1	95	50.000	ENSCGRG00001012429	Pusl1	95	50.000	Cricetulus_griseus_chok1gshd
ENSGAFG00000007546	pusl1	95	50.000	ENSCGRG00000006466	Pusl1	95	50.000	Cricetulus_griseus_crigri
ENSGAFG00000007546	pusl1	96	70.671	ENSCSEG00000005159	pusl1	95	70.671	Cynoglossus_semilaevis
ENSGAFG00000007546	pusl1	81	69.038	ENSCVAG00000012923	pusl1	91	69.038	Cyprinodon_variegatus
ENSGAFG00000007546	pusl1	95	66.187	ENSDARG00000074565	pusl1	97	66.187	Danio_rerio
ENSGAFG00000007546	pusl1	95	33.115	FBgn0083976	CG34140	99	33.115	Drosophila_melanogaster
ENSGAFG00000007546	pusl1	94	51.254	ENSECAG00000006248	PUSL1	91	51.254	Equus_caballus
ENSGAFG00000007546	pusl1	95	49.645	ENSEEUG00000000837	PUSL1	94	49.645	Erinaceus_europaeus
ENSGAFG00000007546	pusl1	93	63.869	ENSELUG00000015945	pusl1	93	63.869	Esox_lucius
ENSGAFG00000007546	pusl1	93	51.449	ENSFCAG00000007617	PUSL1	91	51.449	Felis_catus
ENSGAFG00000007546	pusl1	98	84.775	ENSFHEG00000006370	pusl1	97	84.775	Fundulus_heteroclitus
ENSGAFG00000007546	pusl1	96	70.922	ENSGMOG00000019388	pusl1	100	70.922	Gadus_morhua
ENSGAFG00000007546	pusl1	95	53.047	ENSGALG00000001714	PUSL1	96	53.047	Gallus_gallus
ENSGAFG00000007546	pusl1	96	68.662	ENSGACG00000007848	pusl1	94	68.662	Gasterosteus_aculeatus
ENSGAFG00000007546	pusl1	95	53.405	ENSGAGG00000004730	PUSL1	95	53.405	Gopherus_agassizii
ENSGAFG00000007546	pusl1	83	51.020	ENSGGOG00000005364	PUSL1	94	51.020	Gorilla_gorilla
ENSGAFG00000007546	pusl1	96	79.152	ENSHBUG00000001264	pusl1	94	79.152	Haplochromis_burtoni
ENSGAFG00000007546	pusl1	95	49.110	ENSHGLG00000017570	PUSL1	91	49.110	Heterocephalus_glaber_female
ENSGAFG00000007546	pusl1	88	48.473	ENSHGLG00100007641	PUSL1	86	48.473	Heterocephalus_glaber_male
ENSGAFG00000007546	pusl1	96	67.376	ENSHCOG00000010077	pusl1	100	68.478	Hippocampus_comes
ENSGAFG00000007546	pusl1	96	65.248	ENSIPUG00000023921	pusl1	97	65.248	Ictalurus_punctatus
ENSGAFG00000007546	pusl1	93	50.725	ENSSTOG00000001783	PUSL1	85	50.725	Ictidomys_tridecemlineatus
ENSGAFG00000007546	pusl1	96	51.399	ENSJJAG00000020471	Pusl1	96	51.399	Jaculus_jaculus
ENSGAFG00000007546	pusl1	93	67.273	ENSKMAG00000005154	pusl1	94	67.273	Kryptolebias_marmoratus
ENSGAFG00000007546	pusl1	97	74.035	ENSLBEG00000013469	pusl1	98	74.035	Labrus_bergylta
ENSGAFG00000007546	pusl1	65	54.922	ENSLACG00000018795	PUSL1	95	54.922	Latimeria_chalumnae
ENSGAFG00000007546	pusl1	97	52.281	ENSLOCG00000002210	pusl1	96	52.281	Lepisosteus_oculatus
ENSGAFG00000007546	pusl1	85	51.587	ENSLAFG00000013685	PUSL1	94	51.587	Loxodonta_africana
ENSGAFG00000007546	pusl1	95	50.714	ENSMFAG00000046288	PUSL1	91	50.714	Macaca_fascicularis
ENSGAFG00000007546	pusl1	95	45.000	ENSMMUG00000016279	PUSL1	91	45.000	Macaca_mulatta
ENSGAFG00000007546	pusl1	95	50.714	ENSMNEG00000037989	PUSL1	92	50.714	Macaca_nemestrina
ENSGAFG00000007546	pusl1	96	72.085	ENSMAMG00000016538	pusl1	93	72.085	Mastacembelus_armatus
ENSGAFG00000007546	pusl1	96	78.445	ENSMZEG00005026990	pusl1	94	78.445	Maylandia_zebra
ENSGAFG00000007546	pusl1	95	53.047	ENSMGAG00000003037	PUSL1	95	53.047	Meleagris_gallopavo
ENSGAFG00000007546	pusl1	95	49.286	ENSMAUG00000019924	Pusl1	95	49.286	Mesocricetus_auratus
ENSGAFG00000007546	pusl1	95	52.837	ENSMICG00000014171	PUSL1	95	52.837	Microcebus_murinus
ENSGAFG00000007546	pusl1	95	51.071	ENSMOCG00000005602	Pusl1	95	51.071	Microtus_ochrogaster
ENSGAFG00000007546	pusl1	94	72.500	ENSMMOG00000003269	pusl1	100	72.500	Mola_mola
ENSGAFG00000007546	pusl1	96	72.183	ENSMALG00000021686	pusl1	94	72.183	Monopterus_albus
ENSGAFG00000007546	pusl1	95	50.714	MGP_CAROLIEiJ_G0026911	Pusl1	95	50.714	Mus_caroli
ENSGAFG00000007546	pusl1	95	50.714	ENSMUSG00000051557	Pusl1	95	50.714	Mus_musculus
ENSGAFG00000007546	pusl1	95	51.429	MGP_PahariEiJ_G0029260	Pusl1	95	51.429	Mus_pahari
ENSGAFG00000007546	pusl1	95	51.429	MGP_SPRETEiJ_G0027906	Pusl1	95	51.429	Mus_spretus
ENSGAFG00000007546	pusl1	95	51.071	ENSMPUG00000014313	PUSL1	91	51.071	Mustela_putorius_furo
ENSGAFG00000007546	pusl1	95	50.534	ENSNGAG00000004647	Pusl1	83	50.534	Nannospalax_galili
ENSGAFG00000007546	pusl1	96	67.606	ENSNBRG00000014762	pusl1	89	74.797	Neolamprologus_brichardi
ENSGAFG00000007546	pusl1	85	51.793	ENSNLEG00000000051	PUSL1	91	51.793	Nomascus_leucogenys
ENSGAFG00000007546	pusl1	93	52.347	ENSMEUG00000011649	-	96	52.347	Notamacropus_eugenii
ENSGAFG00000007546	pusl1	93	42.125	ENSMEUG00000005176	-	98	42.125	Notamacropus_eugenii
ENSGAFG00000007546	pusl1	97	50.347	ENSODEG00000008247	PUSL1	91	50.347	Octodon_degus
ENSGAFG00000007546	pusl1	96	78.799	ENSONIG00000019361	pusl1	94	78.799	Oreochromis_niloticus
ENSGAFG00000007546	pusl1	96	71.378	ENSORLG00000016228	pusl1	96	71.378	Oryzias_latipes
ENSGAFG00000007546	pusl1	96	71.378	ENSORLG00020013710	pusl1	96	71.378	Oryzias_latipes_hni
ENSGAFG00000007546	pusl1	96	71.631	ENSORLG00015008715	pusl1	99	71.631	Oryzias_latipes_hsok
ENSGAFG00000007546	pusl1	97	69.825	ENSOMEG00000018897	pusl1	98	69.825	Oryzias_melastigma
ENSGAFG00000007546	pusl1	93	51.449	ENSOGAG00000031692	PUSL1	95	51.449	Otolemur_garnettii
ENSGAFG00000007546	pusl1	85	51.984	ENSOARG00000004905	PUSL1	94	51.984	Ovis_aries
ENSGAFG00000007546	pusl1	95	51.429	ENSPPAG00000029283	PUSL1	91	51.429	Pan_paniscus
ENSGAFG00000007546	pusl1	93	51.812	ENSPPRG00000023329	PUSL1	91	51.812	Panthera_pardus
ENSGAFG00000007546	pusl1	85	52.381	ENSPTIG00000018532	PUSL1	93	52.381	Panthera_tigris_altaica
ENSGAFG00000007546	pusl1	95	51.071	ENSPTRG00000000021	PUSL1	91	51.071	Pan_troglodytes
ENSGAFG00000007546	pusl1	95	50.714	ENSPANG00000000591	PUSL1	91	50.714	Papio_anubis
ENSGAFG00000007546	pusl1	96	61.268	ENSPKIG00000002447	pusl1	97	61.702	Paramormyrops_kingsleyae
ENSGAFG00000007546	pusl1	85	55.952	ENSPSIG00000002781	PUSL1	93	55.952	Pelodiscus_sinensis
ENSGAFG00000007546	pusl1	94	69.928	ENSPMGG00000011051	pusl1	99	69.928	Periophthalmus_magnuspinnatus
ENSGAFG00000007546	pusl1	95	50.714	ENSPEMG00000013541	Pusl1	95	50.714	Peromyscus_maniculatus_bairdii
ENSGAFG00000007546	pusl1	99	48.986	ENSPCIG00000007816	-	67	48.986	Phascolarctos_cinereus
ENSGAFG00000007546	pusl1	96	90.459	ENSPFOG00000015448	pusl1	100	90.909	Poecilia_formosa
ENSGAFG00000007546	pusl1	98	89.273	ENSPLAG00000004348	pusl1	98	88.276	Poecilia_latipinna
ENSGAFG00000007546	pusl1	98	89.273	ENSPMEG00000000931	pusl1	98	88.276	Poecilia_mexicana
ENSGAFG00000007546	pusl1	98	87.197	ENSPREG00000002324	pusl1	98	86.207	Poecilia_reticulata
ENSGAFG00000007546	pusl1	83	50.202	ENSPPYG00000002014	PUSL1	88	50.202	Pongo_abelii
ENSGAFG00000007546	pusl1	83	43.265	ENSPCAG00000002272	PUSL1	99	43.265	Procavia_capensis
ENSGAFG00000007546	pusl1	68	55.556	ENSPVAG00000001016	PUSL1	65	55.556	Pteropus_vampyrus
ENSGAFG00000007546	pusl1	82	80.833	ENSPNYG00000006588	pusl1	100	80.833	Pundamilia_nyererei
ENSGAFG00000007546	pusl1	97	63.158	ENSPNAG00000024441	pusl1	98	63.158	Pygocentrus_nattereri
ENSGAFG00000007546	pusl1	95	52.143	ENSRNOG00000022354	Pusl1	98	52.381	Rattus_norvegicus
ENSGAFG00000007546	pusl1	95	50.357	ENSRBIG00000036842	PUSL1	91	50.357	Rhinopithecus_bieti
ENSGAFG00000007546	pusl1	95	50.357	ENSRROG00000030704	PUSL1	91	50.357	Rhinopithecus_roxellana
ENSGAFG00000007546	pusl1	85	51.587	ENSSBOG00000032249	PUSL1	90	51.587	Saimiri_boliviensis_boliviensis
ENSGAFG00000007546	pusl1	94	63.441	ENSSFOG00015008281	pusl1	92	63.441	Scleropages_formosus
ENSGAFG00000007546	pusl1	96	70.318	ENSSMAG00000007187	pusl1	94	70.318	Scophthalmus_maximus
ENSGAFG00000007546	pusl1	96	74.912	ENSSDUG00000000287	pusl1	95	70.213	Seriola_dumerili
ENSGAFG00000007546	pusl1	96	74.558	ENSSLDG00000009605	pusl1	90	74.558	Seriola_lalandi_dorsalis
ENSGAFG00000007546	pusl1	58	49.711	ENSSARG00000005323	-	91	49.711	Sorex_araneus
ENSGAFG00000007546	pusl1	93	68.613	ENSSPAG00000002528	pusl1	100	68.613	Stegastes_partitus
ENSGAFG00000007546	pusl1	98	49.147	ENSSSCG00000003338	PUSL1	94	49.147	Sus_scrofa
ENSGAFG00000007546	pusl1	93	48.905	ENSTGUG00000003214	PUSL1	96	49.091	Taeniopygia_guttata
ENSGAFG00000007546	pusl1	97	68.421	ENSTRUG00000010102	pusl1	96	68.421	Takifugu_rubripes
ENSGAFG00000007546	pusl1	62	67.403	ENSTNIG00000005789	pusl1	82	67.403	Tetraodon_nigroviridis
ENSGAFG00000007546	pusl1	61	46.995	ENSTBEG00000005001	PUSL1	75	46.995	Tupaia_belangeri
ENSGAFG00000007546	pusl1	95	43.463	ENSTTRG00000017030	PUSL1	92	43.463	Tursiops_truncatus
ENSGAFG00000007546	pusl1	90	47.388	ENSUAMG00000012801	PUSL1	86	47.388	Ursus_americanus
ENSGAFG00000007546	pusl1	90	47.388	ENSUMAG00000002084	PUSL1	86	47.388	Ursus_maritimus
ENSGAFG00000007546	pusl1	97	49.310	ENSVVUG00000004320	PUSL1	92	44.025	Vulpes_vulpes
ENSGAFG00000007546	pusl1	78	51.739	ENSXETG00000011145	pusl1	100	51.739	Xenopus_tropicalis
ENSGAFG00000007546	pusl1	96	87.719	ENSXCOG00000017748	pusl1	99	87.719	Xiphophorus_couchianus
ENSGAFG00000007546	pusl1	98	92.734	ENSXMAG00000018846	pusl1	98	92.069	Xiphophorus_maculatus