EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000007573 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3050 bases
Position: chrNHOQ01000621.1:2406498-2409547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011170	RRM_1	PF00076.22	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011283	-	1645	-	ENSGAFP00000011170	239 (aa)	-	UPI000DD243B0

Gene Model

Click here to download ENSGAFG00000007573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000007573	-	100	47.080	ENSGAFG00000006014	alyref	100	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007573	-	100	65.079	ENSAPOG00000000183	-	100	65.079	Acanthochromis_polyacanthus
ENSGAFG00000007573	-	100	53.480	ENSACIG00000020351	-	100	55.678	Amphilophus_citrinellus
ENSGAFG00000007573	-	97	43.866	ENSACIG00000006351	alyref	97	47.212	Amphilophus_citrinellus
ENSGAFG00000007573	-	100	46.014	ENSAOCG00000014012	alyref	100	48.540	Amphiprion_ocellaris
ENSGAFG00000007573	-	100	65.339	ENSAOCG00000019305	-	100	65.339	Amphiprion_ocellaris
ENSGAFG00000007573	-	100	46.014	ENSAPEG00000014603	alyref	100	48.540	Amphiprion_percula
ENSGAFG00000007573	-	100	64.940	ENSAPEG00000013527	-	100	66.932	Amphiprion_percula
ENSGAFG00000007573	-	76	49.505	ENSATEG00000004307	alyref	100	47.143	Anabas_testudineus
ENSGAFG00000007573	-	100	65.234	ENSATEG00000000382	-	100	64.032	Anabas_testudineus
ENSGAFG00000007573	-	100	58.333	ENSACLG00000010184	-	100	60.606	Astatotilapia_calliptera
ENSGAFG00000007573	-	76	48.485	ENSACLG00000008432	alyref	100	45.035	Astatotilapia_calliptera
ENSGAFG00000007573	-	100	46.643	ENSAMXG00000007359	alyref	100	47.350	Astyanax_mexicanus
ENSGAFG00000007573	-	98	38.433	ENSCING00000013568	-	99	42.412	Ciona_intestinalis
ENSGAFG00000007573	-	98	41.797	ENSCSAVG00000003324	-	99	41.200	Ciona_savignyi
ENSGAFG00000007573	-	76	50.769	ENSCSEG00000017800	alyref	100	48.175	Cynoglossus_semilaevis
ENSGAFG00000007573	-	100	46.691	ENSCVAG00000014869	alyref	100	49.084	Cyprinodon_variegatus
ENSGAFG00000007573	-	100	81.818	ENSCVAG00000007789	-	100	83.471	Cyprinodon_variegatus
ENSGAFG00000007573	-	100	45.455	ENSDARG00000077732	alyref	100	47.163	Danio_rerio
ENSGAFG00000007573	-	99	40.569	FBgn0010774	Ref1	67	43.784	Drosophila_melanogaster
ENSGAFG00000007573	-	97	40.769	ENSEBUG00000008253	alyref	95	43.750	Eptatretus_burgeri
ENSGAFG00000007573	-	100	41.833	ENSEBUG00000006305	alyref	100	42.629	Eptatretus_burgeri
ENSGAFG00000007573	-	100	49.064	ENSELUG00000008849	-	100	52.809	Esox_lucius
ENSGAFG00000007573	-	100	45.985	ENSELUG00000017178	alyref	100	48.364	Esox_lucius
ENSGAFG00000007573	-	58	53.896	ENSFALG00000011923	-	96	55.195	Ficedula_albicollis
ENSGAFG00000007573	-	100	85.185	ENSFHEG00000004698	-	100	86.831	Fundulus_heteroclitus
ENSGAFG00000007573	-	100	45.756	ENSFHEG00000019426	alyref	100	48.175	Fundulus_heteroclitus
ENSGAFG00000007573	-	69	55.851	ENSGMOG00000013122	-	100	56.383	Gadus_morhua
ENSGAFG00000007573	-	100	48.148	ENSGMOG00000009882	alyref	100	48.889	Gadus_morhua
ENSGAFG00000007573	-	76	48.485	ENSHBUG00000020196	alyref	100	45.035	Haplochromis_burtoni
ENSGAFG00000007573	-	100	58.801	ENSHBUG00000001454	-	100	61.049	Haplochromis_burtoni
ENSGAFG00000007573	-	98	58.431	ENSHCOG00000012825	-	95	58.431	Hippocampus_comes
ENSGAFG00000007573	-	100	45.878	ENSIPUG00000009469	alyref	100	46.931	Ictalurus_punctatus
ENSGAFG00000007573	-	76	50.000	ENSSTOG00000016570	-	99	51.852	Ictidomys_tridecemlineatus
ENSGAFG00000007573	-	100	47.464	ENSKMAG00000008912	alyref	100	48.188	Kryptolebias_marmoratus
ENSGAFG00000007573	-	100	69.167	ENSKMAG00000006462	-	100	69.167	Kryptolebias_marmoratus
ENSGAFG00000007573	-	97	49.398	ENSLBEG00000023118	alyref	88	51.406	Labrus_bergylta
ENSGAFG00000007573	-	100	59.643	ENSLBEG00000005387	-	100	57.455	Labrus_bergylta
ENSGAFG00000007573	-	97	61.628	ENSLBEG00000012930	-	99	59.524	Labrus_bergylta
ENSGAFG00000007573	-	75	49.020	ENSLOCG00000013879	alyref	84	49.519	Lepisosteus_oculatus
ENSGAFG00000007573	-	100	63.241	ENSMAMG00000005464	-	100	63.636	Mastacembelus_armatus
ENSGAFG00000007573	-	100	46.739	ENSMAMG00000003034	alyref	100	47.080	Mastacembelus_armatus
ENSGAFG00000007573	-	76	48.485	ENSMZEG00005008639	alyref	100	45.035	Maylandia_zebra
ENSGAFG00000007573	-	100	57.955	ENSMZEG00005012096	-	100	60.227	Maylandia_zebra
ENSGAFG00000007573	-	97	46.992	ENSMMOG00000012458	alyref	95	47.744	Mola_mola
ENSGAFG00000007573	-	97	58.607	ENSMMOG00000007032	-	97	59.836	Mola_mola
ENSGAFG00000007573	-	100	65.019	ENSMALG00000006054	-	100	63.118	Monopterus_albus
ENSGAFG00000007573	-	100	41.544	ENSMLUG00000006521	-	100	44.118	Myotis_lucifugus
ENSGAFG00000007573	-	100	43.214	ENSMLUG00000004098	-	100	44.030	Myotis_lucifugus
ENSGAFG00000007573	-	72	47.895	ENSMLUG00000022178	-	98	41.544	Myotis_lucifugus
ENSGAFG00000007573	-	97	41.197	ENSMLUG00000022467	-	70	46.000	Myotis_lucifugus
ENSGAFG00000007573	-	72	47.895	ENSMLUG00000028605	-	98	41.392	Myotis_lucifugus
ENSGAFG00000007573	-	72	46.667	ENSMLUG00000009247	-	98	42.424	Myotis_lucifugus
ENSGAFG00000007573	-	100	40.767	ENSMLUG00000014372	-	100	43.796	Myotis_lucifugus
ENSGAFG00000007573	-	72	50.538	ENSMLUG00000030671	-	98	42.029	Myotis_lucifugus
ENSGAFG00000007573	-	100	48.207	ENSNGAG00000022014	-	100	49.402	Nannospalax_galili
ENSGAFG00000007573	-	76	48.500	ENSNBRG00000001747	alyref	100	45.070	Neolamprologus_brichardi
ENSGAFG00000007573	-	100	58.333	ENSNBRG00000017460	-	100	60.606	Neolamprologus_brichardi
ENSGAFG00000007573	-	100	43.929	ENSONIG00000019434	alyref	100	45.263	Oreochromis_niloticus
ENSGAFG00000007573	-	100	58.846	ENSONIG00000003296	-	100	61.686	Oreochromis_niloticus
ENSGAFG00000007573	-	97	56.040	ENSORLG00000001620	-	88	54.027	Oryzias_latipes
ENSGAFG00000007573	-	100	69.048	ENSORLG00020015673	-	100	67.460	Oryzias_latipes_hni
ENSGAFG00000007573	-	100	45.985	ENSORLG00020011942	alyref	100	46.237	Oryzias_latipes_hni
ENSGAFG00000007573	-	100	67.717	ENSORLG00015015143	-	100	67.323	Oryzias_latipes_hsok
ENSGAFG00000007573	-	100	46.324	ENSORLG00015022664	alyref	100	46.570	Oryzias_latipes_hsok
ENSGAFG00000007573	-	100	45.956	ENSOMEG00000019176	alyref	100	47.794	Oryzias_melastigma
ENSGAFG00000007573	-	100	67.460	ENSOMEG00000007158	-	99	66.270	Oryzias_melastigma
ENSGAFG00000007573	-	86	46.121	ENSPPAG00000036403	-	81	49.533	Pan_paniscus
ENSGAFG00000007573	-	97	48.276	ENSPKIG00000006233	-	79	49.206	Paramormyrops_kingsleyae
ENSGAFG00000007573	-	100	47.312	ENSPKIG00000007070	alyref	100	49.434	Paramormyrops_kingsleyae
ENSGAFG00000007573	-	69	57.558	ENSPMGG00000012994	-	93	54.651	Periophthalmus_magnuspinnatus
ENSGAFG00000007573	-	97	47.744	ENSPMGG00000016600	alyref	89	46.992	Periophthalmus_magnuspinnatus
ENSGAFG00000007573	-	100	47.410	ENSPEMG00000016628	-	100	47.809	Peromyscus_maniculatus_bairdii
ENSGAFG00000007573	-	100	46.377	ENSPFOG00000022825	alyref	99	46.953	Poecilia_formosa
ENSGAFG00000007573	-	100	95.473	ENSPFOG00000017094	-	100	95.473	Poecilia_formosa
ENSGAFG00000007573	-	100	46.545	ENSPLAG00000006948	alyref	100	48.014	Poecilia_latipinna
ENSGAFG00000007573	-	100	95.473	ENSPLAG00000014380	-	100	95.473	Poecilia_latipinna
ENSGAFG00000007573	-	100	46.377	ENSPMEG00000003547	alyref	100	46.403	Poecilia_mexicana
ENSGAFG00000007573	-	100	95.473	ENSPMEG00000023039	-	100	95.473	Poecilia_mexicana
ENSGAFG00000007573	-	100	46.909	ENSPREG00000015795	alyref	100	46.643	Poecilia_reticulata
ENSGAFG00000007573	-	100	89.157	ENSPREG00000003649	-	100	90.763	Poecilia_reticulata
ENSGAFG00000007573	-	97	56.420	ENSPNYG00000002879	-	98	58.915	Pundamilia_nyererei
ENSGAFG00000007573	-	76	48.485	ENSPNYG00000017498	alyref	100	45.035	Pundamilia_nyererei
ENSGAFG00000007573	-	100	46.350	ENSPNAG00000002531	alyref	100	47.445	Pygocentrus_nattereri
ENSGAFG00000007573	-	72	52.432	ENSSBOG00000030924	-	84	54.054	Saimiri_boliviensis_boliviensis
ENSGAFG00000007573	-	99	43.431	ENSSHAG00000012866	-	100	42.745	Sarcophilus_harrisii
ENSGAFG00000007573	-	97	44.628	ENSSHAG00000000609	-	98	43.673	Sarcophilus_harrisii
ENSGAFG00000007573	-	69	52.222	ENSSFOG00015003678	alyref	83	52.222	Scleropages_formosus
ENSGAFG00000007573	-	75	56.316	ENSSFOG00015003923	alyref	71	56.522	Scleropages_formosus
ENSGAFG00000007573	-	100	65.779	ENSSMAG00000011169	-	100	65.779	Scophthalmus_maximus
ENSGAFG00000007573	-	100	46.209	ENSSMAG00000009283	alyref	100	48.746	Scophthalmus_maximus
ENSGAFG00000007573	-	100	45.652	ENSSDUG00000016158	alyref	100	48.913	Seriola_dumerili
ENSGAFG00000007573	-	100	47.292	ENSSLDG00000017803	alyref	100	47.653	Seriola_lalandi_dorsalis
ENSGAFG00000007573	-	97	64.800	ENSSPAG00000017028	-	95	65.600	Stegastes_partitus
ENSGAFG00000007573	-	100	57.634	ENSTRUG00000003051	-	100	55.556	Takifugu_rubripes
ENSGAFG00000007573	-	100	46.388	ENSTNIG00000011595	alyref	100	45.865	Tetraodon_nigroviridis
ENSGAFG00000007573	-	100	62.348	ENSTNIG00000014136	-	100	58.776	Tetraodon_nigroviridis
ENSGAFG00000007573	-	72	53.763	ENSVVUG00000000272	-	90	51.961	Vulpes_vulpes
ENSGAFG00000007573	-	97	46.816	ENSXCOG00000018047	alyref	97	49.813	Xiphophorus_couchianus
ENSGAFG00000007573	-	100	90.496	ENSXMAG00000018086	-	100	92.149	Xiphophorus_maculatus
ENSGAFG00000007573	-	97	46.816	ENSXMAG00000012218	alyref	97	49.813	Xiphophorus_maculatus