EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000007683 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-93g23.2
Alias: -
Full Name: si:ch211-93g23.2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3077 bases
Position: chrNHOQ01000204.1:766831-769907
Accession: ZDB-GENE-090312-164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011334	tRNA_U5-meth_tr	PF05958.11	0.00023	1	1
ENSGAFP00000011342	tRNA_U5-meth_tr	PF05958.11	0.00035	1	1
ENSGAFP00000011342	Methyltransf_31	PF13847.6	6.8e-09	1	1
ENSGAFP00000011334	Methyltransf_31	PF13847.6	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011460	-	798	-	ENSGAFP00000011342	265 (aa)	-	-
ENSGAFT00000011452	-	810	-	ENSGAFP00000011334	269 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000007683	si:ch211-93g23.2	99	42.857	ENSGAFG00000018387	-	99	42.857
ENSGAFG00000007683	si:ch211-93g23.2	99	49.265	ENSGAFG00000018382	zgc:162780	99	49.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007683	si:ch211-93g23.2	99	64.207	ENSAPOG00000008054	si:ch211-93g23.2	100	64.207	Acanthochromis_polyacanthus
ENSGAFG00000007683	si:ch211-93g23.2	99	51.471	ENSAPOG00000015391	zgc:162780	99	51.471	Acanthochromis_polyacanthus
ENSGAFG00000007683	si:ch211-93g23.2	99	51.103	ENSACIG00000015409	zgc:162780	97	51.103	Amphilophus_citrinellus
ENSGAFG00000007683	si:ch211-93g23.2	58	61.350	ENSACIG00000024058	si:ch211-93g23.2	87	61.350	Amphilophus_citrinellus
ENSGAFG00000007683	si:ch211-93g23.2	99	66.421	ENSAOCG00000000447	-	100	66.421	Amphiprion_ocellaris
ENSGAFG00000007683	si:ch211-93g23.2	99	51.471	ENSAOCG00000004147	zgc:162780	99	51.471	Amphiprion_ocellaris
ENSGAFG00000007683	si:ch211-93g23.2	99	51.481	ENSAPEG00000008212	zgc:162780	99	51.481	Amphiprion_percula
ENSGAFG00000007683	si:ch211-93g23.2	58	63.580	ENSAPEG00000012843	si:ch211-93g23.2	100	63.580	Amphiprion_percula
ENSGAFG00000007683	si:ch211-93g23.2	99	50.735	ENSATEG00000011843	zgc:162780	99	50.735	Anabas_testudineus
ENSGAFG00000007683	si:ch211-93g23.2	99	51.103	ENSACLG00000006922	zgc:162780	99	51.103	Astatotilapia_calliptera
ENSGAFG00000007683	si:ch211-93g23.2	99	64.074	ENSACLG00000009543	si:ch211-93g23.2	100	64.074	Astatotilapia_calliptera
ENSGAFG00000007683	si:ch211-93g23.2	100	50.545	ENSAMXG00000040257	zgc:162780	100	50.545	Astyanax_mexicanus
ENSGAFG00000007683	si:ch211-93g23.2	99	50.735	ENSCVAG00000021445	zgc:162780	99	50.735	Cyprinodon_variegatus
ENSGAFG00000007683	si:ch211-93g23.2	100	77.289	ENSCVAG00000012310	si:ch211-93g23.2	100	77.289	Cyprinodon_variegatus
ENSGAFG00000007683	si:ch211-93g23.2	100	52.190	ENSDARG00000069548	zgc:162780	100	52.190	Danio_rerio
ENSGAFG00000007683	si:ch211-93g23.2	99	56.089	ENSDARG00000070558	si:ch211-93g23.2	99	56.089	Danio_rerio
ENSGAFG00000007683	si:ch211-93g23.2	99	53.480	ENSELUG00000005357	zgc:162780	99	54.244	Esox_lucius
ENSGAFG00000007683	si:ch211-93g23.2	99	50.368	ENSFHEG00000005204	zgc:162780	99	50.368	Fundulus_heteroclitus
ENSGAFG00000007683	si:ch211-93g23.2	85	51.724	ENSGMOG00000005502	zgc:162780	99	51.724	Gadus_morhua
ENSGAFG00000007683	si:ch211-93g23.2	99	62.868	ENSGACG00000014722	si:ch211-93g23.2	99	62.868	Gasterosteus_aculeatus
ENSGAFG00000007683	si:ch211-93g23.2	99	51.103	ENSHBUG00000000524	zgc:162780	99	51.103	Haplochromis_burtoni
ENSGAFG00000007683	si:ch211-93g23.2	99	63.333	ENSHBUG00000004418	si:ch211-93g23.2	100	63.333	Haplochromis_burtoni
ENSGAFG00000007683	si:ch211-93g23.2	99	53.333	ENSHCOG00000009980	si:ch211-93g23.2	100	53.333	Hippocampus_comes
ENSGAFG00000007683	si:ch211-93g23.2	99	47.059	ENSKMAG00000018418	zgc:162780	97	47.059	Kryptolebias_marmoratus
ENSGAFG00000007683	si:ch211-93g23.2	99	64.312	ENSLBEG00000006987	-	100	64.312	Labrus_bergylta
ENSGAFG00000007683	si:ch211-93g23.2	99	51.103	ENSLBEG00000026521	zgc:162780	99	51.103	Labrus_bergylta
ENSGAFG00000007683	si:ch211-93g23.2	99	63.941	ENSLBEG00000013961	si:ch211-93g23.2	100	63.941	Labrus_bergylta
ENSGAFG00000007683	si:ch211-93g23.2	99	52.206	ENSMAMG00000013237	zgc:162780	99	52.206	Mastacembelus_armatus
ENSGAFG00000007683	si:ch211-93g23.2	99	51.471	ENSMZEG00005000825	zgc:162780	99	51.471	Maylandia_zebra
ENSGAFG00000007683	si:ch211-93g23.2	99	64.074	ENSMZEG00005014627	si:ch211-93g23.2	100	64.074	Maylandia_zebra
ENSGAFG00000007683	si:ch211-93g23.2	58	59.119	ENSMMOG00000019634	si:ch211-93g23.2	95	59.119	Mola_mola
ENSGAFG00000007683	si:ch211-93g23.2	99	51.838	ENSMALG00000012598	zgc:162780	99	51.838	Monopterus_albus
ENSGAFG00000007683	si:ch211-93g23.2	99	51.111	ENSNBRG00000014908	zgc:162780	99	51.111	Neolamprologus_brichardi
ENSGAFG00000007683	si:ch211-93g23.2	99	63.333	ENSNBRG00000019105	si:ch211-93g23.2	100	63.333	Neolamprologus_brichardi
ENSGAFG00000007683	si:ch211-93g23.2	99	50.735	ENSONIG00000004462	zgc:162780	99	50.735	Oreochromis_niloticus
ENSGAFG00000007683	si:ch211-93g23.2	99	63.333	ENSONIG00000013383	si:ch211-93g23.2	100	63.333	Oreochromis_niloticus
ENSGAFG00000007683	si:ch211-93g23.2	99	64.074	ENSORLG00000002372	si:ch211-93g23.2	100	64.074	Oryzias_latipes
ENSGAFG00000007683	si:ch211-93g23.2	99	64.074	ENSORLG00020022021	si:ch211-93g23.2	100	64.074	Oryzias_latipes_hni
ENSGAFG00000007683	si:ch211-93g23.2	99	63.704	ENSORLG00015021473	si:ch211-93g23.2	100	63.704	Oryzias_latipes_hsok
ENSGAFG00000007683	si:ch211-93g23.2	99	51.838	ENSORLG00015008510	zgc:162780	99	51.838	Oryzias_latipes_hsok
ENSGAFG00000007683	si:ch211-93g23.2	99	65.556	ENSOMEG00000013365	si:ch211-93g23.2	100	65.556	Oryzias_melastigma
ENSGAFG00000007683	si:ch211-93g23.2	99	50.000	ENSOMEG00000010679	zgc:162780	99	50.000	Oryzias_melastigma
ENSGAFG00000007683	si:ch211-93g23.2	99	54.613	ENSPKIG00000011610	si:ch211-93g23.2	99	54.613	Paramormyrops_kingsleyae
ENSGAFG00000007683	si:ch211-93g23.2	60	59.639	ENSPMGG00000011829	si:ch211-93g23.2	98	59.639	Periophthalmus_magnuspinnatus
ENSGAFG00000007683	si:ch211-93g23.2	99	49.632	ENSPFOG00000002781	zgc:162780	99	49.632	Poecilia_formosa
ENSGAFG00000007683	si:ch211-93g23.2	100	87.179	ENSPFOG00000013857	si:ch211-93g23.2	100	87.179	Poecilia_formosa
ENSGAFG00000007683	si:ch211-93g23.2	99	49.632	ENSPLAG00000010255	zgc:162780	99	49.632	Poecilia_latipinna
ENSGAFG00000007683	si:ch211-93g23.2	58	83.019	ENSPLAG00000015878	-	97	83.019	Poecilia_latipinna
ENSGAFG00000007683	si:ch211-93g23.2	99	49.632	ENSPMEG00000000022	zgc:162780	99	49.632	Poecilia_mexicana
ENSGAFG00000007683	si:ch211-93g23.2	98	87.640	ENSPMEG00000008837	-	97	87.640	Poecilia_mexicana
ENSGAFG00000007683	si:ch211-93g23.2	99	47.253	ENSPREG00000016480	zgc:162780	96	47.970	Poecilia_reticulata
ENSGAFG00000007683	si:ch211-93g23.2	100	87.179	ENSPREG00000016831	si:ch211-93g23.2	100	87.179	Poecilia_reticulata
ENSGAFG00000007683	si:ch211-93g23.2	99	63.704	ENSPNYG00000009369	si:ch211-93g23.2	100	63.704	Pundamilia_nyererei
ENSGAFG00000007683	si:ch211-93g23.2	99	51.471	ENSPNYG00000009882	zgc:162780	99	51.471	Pundamilia_nyererei
ENSGAFG00000007683	si:ch211-93g23.2	100	52.206	ENSPNAG00000026108	zgc:162780	100	52.206	Pygocentrus_nattereri
ENSGAFG00000007683	si:ch211-93g23.2	99	48.529	ENSSFOG00015018587	si:ch211-93g23.2	99	48.529	Scleropages_formosus
ENSGAFG00000007683	si:ch211-93g23.2	99	54.044	ENSSMAG00000004498	zgc:162780	99	54.044	Scophthalmus_maximus
ENSGAFG00000007683	si:ch211-93g23.2	58	69.182	ENSSDUG00000022311	si:ch211-93g23.2	98	69.182	Seriola_dumerili
ENSGAFG00000007683	si:ch211-93g23.2	99	52.593	ENSSDUG00000010324	zgc:162780	99	52.593	Seriola_dumerili
ENSGAFG00000007683	si:ch211-93g23.2	99	51.471	ENSSLDG00000021444	zgc:162780	99	51.471	Seriola_lalandi_dorsalis
ENSGAFG00000007683	si:ch211-93g23.2	99	66.667	ENSSLDG00000005926	si:ch211-93g23.2	100	66.667	Seriola_lalandi_dorsalis
ENSGAFG00000007683	si:ch211-93g23.2	61	64.671	ENSSPAG00000014251	si:ch211-93g23.2	95	64.671	Stegastes_partitus
ENSGAFG00000007683	si:ch211-93g23.2	100	60.440	ENSTRUG00000014609	si:ch211-93g23.2	100	60.440	Takifugu_rubripes
ENSGAFG00000007683	si:ch211-93g23.2	99	60.370	ENSTNIG00000000686	-	99	60.370	Tetraodon_nigroviridis
ENSGAFG00000007683	si:ch211-93g23.2	58	85.535	ENSXCOG00000020437	si:ch211-93g23.2	97	85.535	Xiphophorus_couchianus
ENSGAFG00000007683	si:ch211-93g23.2	99	49.632	ENSXCOG00000014527	zgc:162780	99	49.632	Xiphophorus_couchianus
ENSGAFG00000007683	si:ch211-93g23.2	100	91.575	ENSXMAG00000007855	si:ch211-93g23.2	100	91.575	Xiphophorus_maculatus
ENSGAFG00000007683	si:ch211-93g23.2	99	49.632	ENSXMAG00000026715	zgc:162780	99	49.632	Xiphophorus_maculatus