EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000007684 (Gene tree)
Gene ID
-
Gene Symbol
rab23
Alias
zgc:110261
Full Name
RAB23%2C member RAS oncogene family
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
5746 bases
Position
chrNHOQ01001229.1:9650447-9656192
Accession
ZDB-GENE-050522-328
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000011337MMR_HSR1PF01926.233.3e-0711
ENSGAFP00000011330MMR_HSR1PF01926.233.8e-0711
ENSGAFP00000011325MMR_HSR1PF01926.233.9e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000011454-615-ENSGAFP00000011337204 (aa)--
ENSGAFT00000011443-1555-ENSGAFP00000011325235 (aa)--
ENSGAFT00000011448-962-ENSGAFP00000011330235 (aa)--
Gene Model
Click here to download ENSGAFG00000007684's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007684's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000007684rab237540.764ENSGAFG00000015135rab365838.255
ENSGAFG00000007684rab238035.602ENSGAFG00000007102rab11bb7936.047
ENSGAFG00000007684rab237133.526ENSGAFG00000015490rab33a5732.919
ENSGAFG00000007684rab237137.415ENSGAFG00000021738rhebl17837.500
ENSGAFG00000007684rab239631.000ENSGAFG00000014730-9030.851
ENSGAFG00000007684rab238138.500ENSGAFG00000012579rab34a6836.508
ENSGAFG00000007684rab239535.025ENSGAFG00000010916rab6bb8834.595
ENSGAFG00000007684rab237435.294ENSGAFG00000002141rab42a7234.615
ENSGAFG00000007684rab237135.811ENSGAFG00000021202zgc:1015597034.146
ENSGAFG00000007684rab237738.172ENSGAFG00000020102si:dkey-13a21.49138.172
ENSGAFG00000007684rab236430.065ENSGAFG00000021814hrasb8030.065
ENSGAFG00000007684rab239832.536ENSGAFG00000021725rab11al8832.105
ENSGAFG00000007684rab239633.990ENSGAFG00000021724rab25b8733.696
ENSGAFG00000007684rab237736.875ENSGAFG00000004604RAB39B6838.194
ENSGAFG00000007684rab239534.343ENSGAFG00000014787-9034.225
ENSGAFG00000007684rab237536.774ENSGAFG00000006932-6937.415
ENSGAFG00000007684rab238337.059ENSGAFG00000015702zgc:1719276337.342
ENSGAFG00000007684rab237335.714ENSGAFG00000018916-6834.416
ENSGAFG00000007684rab236931.788ENSGAFG00000014541rras27131.788
ENSGAFG00000007684rab238335.057ENSGAFG00000021688-7735.119
ENSGAFG00000007684rab239532.995ENSGAFG00000006356rab6a8832.432
ENSGAFG00000007684rab237537.013ENSGAFG00000008560rab18b8337.209
ENSGAFG00000007684rab239432.367ENSGAFG00000006846rab2a9132.308
ENSGAFG00000007684rab237335.714ENSGAFG00000000591rab9a7133.117
ENSGAFG00000007684rab237732.919ENSGAFG00000019659rab33ba6232.215
ENSGAFG00000007684rab237834.783ENSGAFG00000005477rab4a7235.065
ENSGAFG00000007684rab236935.211ENSGAFG00000010541rras7834.615
ENSGAFG00000007684rab237437.821ENSGAFG00000008183si:dkey-34d22.57138.217
ENSGAFG00000007684rab239832.673ENSGAFG00000000918-9034.066
ENSGAFG00000007684rab238836.022ENSGAFG00000002790rab18a9136.022
ENSGAFG00000007684rab239434.343ENSGAFG00000000629RAB298433.333
ENSGAFG00000007684rab238335.057ENSGAFG00000020476RAB7A7734.132
ENSGAFG00000007684rab237136.735ENSGAFG00000020906rheb7836.806
ENSGAFG00000007684rab237136.424ENSGAFG00000015249-5835.252
ENSGAFG00000007684rab237534.756ENSGAFG00000007473rasl11a6932.571
ENSGAFG00000007684rab237633.129ENSGAFG00000019285rasl11b6731.765
ENSGAFG00000007684rab237432.895ENSGAFG00000001301rab22a7333.099
ENSGAFG00000007684rab237936.196ENSGAFG00000005679rab11ba7934.884
ENSGAFG00000007684rab237438.158ENSGAFG00000019872rab416937.671
ENSGAFG00000007684rab237435.256ENSGAFG00000004099rab9b6633.333
ENSGAFG00000007684rab237436.842ENSGAFG00000011619rab5aa6935.811
ENSGAFG00000007684rab237834.161ENSGAFG00000017305RAB157042.308
ENSGAFG00000007684rab237030.345ENSGAFG00000021765kras8531.481
ENSGAFG00000007684rab239532.178ENSGAFG00000011713rab25a9031.383
ENSGAFG00000007684rab238037.195ENSGAFG00000016549rab11a8036.047
ENSGAFG00000007684rab237438.158ENSGAFG00000017270rab6ba7037.671
ENSGAFG00000007684rab238534.483ENSGAFG00000020309rab3010034.483
ENSGAFG00000007684rab239833.168ENSGAFG00000019305rab1ba9034.615
ENSGAFG00000007684rab237835.000ENSGAFG00000001289rab1ab7535.948
ENSGAFG00000007684rab237437.500ENSGAFG00000000884rab5c7235.443
ENSGAFG00000007684rab237534.839ENSGAFG00000002756rab157036.667
ENSGAFG00000007684rab237435.526ENSGAFG00000003642-7233.125
ENSGAFG00000007684rab237833.750ENSGAFG00000005388si:dkey-16l2.167433.117
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000007684rab239982.203ENSG00000112210RAB2310081.435Homo_sapiens
ENSGAFG00000007684rab2310094.468ENSAPOG00000008892rab2310094.468Acanthochromis_polyacanthus
ENSGAFG00000007684rab239981.780ENSAMEG00000006825RAB2310081.013Ailuropoda_melanoleuca
ENSGAFG00000007684rab2310094.608ENSACIG00000020496rab2310094.608Amphilophus_citrinellus
ENSGAFG00000007684rab2310095.098ENSAOCG00000004234rab2310095.098Amphiprion_ocellaris
ENSGAFG00000007684rab2310095.098ENSAPEG00000019758rab2310095.098Amphiprion_percula
ENSGAFG00000007684rab2310095.588ENSATEG00000020913rab2310095.588Anabas_testudineus
ENSGAFG00000007684rab237889.375ENSAPLG00000003715RAB2310089.831Anas_platyrhynchos
ENSGAFG00000007684rab239978.059ENSACAG00000006656RAB2310077.731Anolis_carolinensis
ENSGAFG00000007684rab239982.203ENSANAG00000027052-9982.203Aotus_nancymaae
ENSGAFG00000007684rab2310093.617ENSACLG00000002819rab2310093.617Astatotilapia_calliptera
ENSGAFG00000007684rab2310087.379ENSAMXG00000014960rab2310087.379Astyanax_mexicanus
ENSGAFG00000007684rab239980.932ENSBTAG00000005362RAB2310080.169Bos_taurus
ENSGAFG00000007684rab239982.203ENSCJAG00000010247RAB239982.203Callithrix_jacchus
ENSGAFG00000007684rab239982.203ENSCAFG00000002459RAB2310081.435Canis_familiaris
ENSGAFG00000007684rab239982.203ENSCAFG00020015900RAB2310081.435Canis_lupus_dingo
ENSGAFG00000007684rab239980.932ENSCHIG00000009815RAB2310080.169Capra_hircus
ENSGAFG00000007684rab2310081.857ENSTSYG00000029126RAB2310081.857Carlito_syrichta
ENSGAFG00000007684rab239981.277ENSCPOG00000030218RAB239981.277Cavia_porcellus
ENSGAFG00000007684rab239981.780ENSCCAG00000020364RAB239981.780Cebus_capucinus
ENSGAFG00000007684rab239982.627ENSCATG00000027876RAB2310081.857Cercocebus_atys
ENSGAFG00000007684rab239981.780ENSCLAG00000000797RAB2310081.435Chinchilla_lanigera
ENSGAFG00000007684rab239982.627ENSCSAG00000013438RAB239982.627Chlorocebus_sabaeus
ENSGAFG00000007684rab239981.435ENSCPBG00000022640RAB2310081.435Chrysemys_picta_bellii
ENSGAFG00000007684rab2310066.255ENSCING00000001155-10067.078Ciona_intestinalis
ENSGAFG00000007684rab2310063.071ENSCSAVG00000001356-10063.636Ciona_savignyi
ENSGAFG00000007684rab239982.203ENSCANG00000031065RAB2310081.435Colobus_angolensis_palliatus
ENSGAFG00000007684rab239982.203ENSCGRG00001008994Rab2310081.435Cricetulus_griseus_chok1gshd
ENSGAFG00000007684rab239981.277ENSCGRG00000013630Rab2310080.508Cricetulus_griseus_crigri
ENSGAFG00000007684rab2310093.627ENSCSEG00000010565rab2310093.627Cynoglossus_semilaevis
ENSGAFG00000007684rab2310094.608ENSCVAG00000020501rab2310094.608Cyprinodon_variegatus
ENSGAFG00000007684rab2310086.076ENSDARG00000004151rab2310086.076Danio_rerio
ENSGAFG00000007684rab239980.932ENSDNOG00000015501RAB2310080.169Dasypus_novemcinctus
ENSGAFG00000007684rab2310079.747ENSDORG00000028344Rab2310079.747Dipodomys_ordii
ENSGAFG00000007684rab239461.233FBgn0037364Rab238261.233Drosophila_melanogaster
ENSGAFG00000007684rab239664.783ENSEBUG00000010861-9164.783Eptatretus_burgeri
ENSGAFG00000007684rab239982.203ENSEASG00005003529RAB2310081.435Equus_asinus_asinus
ENSGAFG00000007684rab239982.203ENSECAG00000013427RAB239982.203Equus_caballus
ENSGAFG00000007684rab2310081.013ENSEEUG00000015045RAB2310081.013Erinaceus_europaeus
ENSGAFG00000007684rab239988.362ENSELUG00000020788rab239988.362Esox_lucius
ENSGAFG00000007684rab239982.203ENSFCAG00000044358RAB2310081.435Felis_catus
ENSGAFG00000007684rab239980.932ENSFALG00000001708RAB2310080.591Ficedula_albicollis
ENSGAFG00000007684rab239981.780ENSFDAG00000014834RAB2310081.435Fukomys_damarensis
ENSGAFG00000007684rab2310097.021ENSFHEG00000023069rab2310097.021Fundulus_heteroclitus
ENSGAFG00000007684rab2310090.638ENSGMOG00000005102rab2310090.638Gadus_morhua
ENSGAFG00000007684rab239982.203ENSGALG00000016279RAB2310081.435Gallus_gallus
ENSGAFG00000007684rab2310093.617ENSGACG00000006151rab2310093.617Gasterosteus_aculeatus
ENSGAFG00000007684rab239981.013ENSGAGG00000012709RAB2310081.013Gopherus_agassizii
ENSGAFG00000007684rab2310093.627ENSHBUG00000007966rab2310093.627Haplochromis_burtoni
ENSGAFG00000007684rab239967.917ENSHGLG00000009371-10066.390Heterocephalus_glaber_female
ENSGAFG00000007684rab239983.051ENSHGLG00000013030-10082.278Heterocephalus_glaber_female
ENSGAFG00000007684rab239983.051ENSHGLG00100005945-10082.278Heterocephalus_glaber_male
ENSGAFG00000007684rab239967.917ENSHGLG00100017177-10066.390Heterocephalus_glaber_male
ENSGAFG00000007684rab2310091.667ENSHCOG00000013919rab2310091.667Hippocampus_comes
ENSGAFG00000007684rab2310085.437ENSIPUG00000016494rab2310085.437Ictalurus_punctatus
ENSGAFG00000007684rab239981.356ENSSTOG00000010962RAB2310080.591Ictidomys_tridecemlineatus
ENSGAFG00000007684rab239981.780ENSJJAG00000020094Rab239981.780Jaculus_jaculus
ENSGAFG00000007684rab2310094.468ENSKMAG00000018270rab2310094.468Kryptolebias_marmoratus
ENSGAFG00000007684rab239994.581ENSLBEG00000013176rab239994.581Labrus_bergylta
ENSGAFG00000007684rab2310083.122ENSLACG00000004025RAB2310083.122Latimeria_chalumnae
ENSGAFG00000007684rab2310083.333ENSLOCG00000016999rab2310083.333Lepisosteus_oculatus
ENSGAFG00000007684rab239982.627ENSLAFG00000007209RAB2310081.857Loxodonta_africana
ENSGAFG00000007684rab239982.627ENSMFAG00000032369RAB2310081.857Macaca_fascicularis
ENSGAFG00000007684rab239982.627ENSMMUG00000018003RAB2310081.857Macaca_mulatta
ENSGAFG00000007684rab239982.627ENSMNEG00000037012RAB2310081.857Macaca_nemestrina
ENSGAFG00000007684rab239982.627ENSMLEG00000042429RAB2310081.857Mandrillus_leucophaeus
ENSGAFG00000007684rab2310094.118ENSMAMG00000015456rab2310094.118Mastacembelus_armatus
ENSGAFG00000007684rab2310093.627ENSMZEG00005005441rab2310093.627Maylandia_zebra
ENSGAFG00000007684rab239981.780ENSMGAG00000013882RAB2310081.013Meleagris_gallopavo
ENSGAFG00000007684rab239983.051ENSMICG00000014037RAB2310082.278Microcebus_murinus
ENSGAFG00000007684rab239981.780ENSMOCG00000000444Rab2310081.013Microtus_ochrogaster
ENSGAFG00000007684rab2310094.608ENSMMOG00000007703rab2310094.608Mola_mola
ENSGAFG00000007684rab239981.780ENSMODG00000018720RAB2310081.013Monodelphis_domestica
ENSGAFG00000007684rab2310092.340ENSMALG00000002136rab2310092.340Monopterus_albus
ENSGAFG00000007684rab239980.508MGP_CAROLIEiJ_G0014015Rab2310079.747Mus_caroli
ENSGAFG00000007684rab239980.085ENSMUSG00000004768Rab239980.085Mus_musculus
ENSGAFG00000007684rab239979.661MGP_PahariEiJ_G0027261Rab2310078.903Mus_pahari
ENSGAFG00000007684rab239980.085MGP_SPRETEiJ_G0014820Rab239980.085Mus_spretus
ENSGAFG00000007684rab239973.418ENSMPUG00000002642RAB2310072.689Mustela_putorius_furo
ENSGAFG00000007684rab239983.051ENSMLUG00000004058RAB239983.051Myotis_lucifugus
ENSGAFG00000007684rab239981.780ENSNGAG00000018038Rab2310081.013Nannospalax_galili
ENSGAFG00000007684rab2310093.627ENSNBRG00000013691rab2310093.627Neolamprologus_brichardi
ENSGAFG00000007684rab239982.627ENSNLEG00000027830RAB2310081.857Nomascus_leucogenys
ENSGAFG00000007684rab239980.508ENSODEG00000016056RAB2310079.747Octodon_degus
ENSGAFG00000007684rab2310093.644ENSONIG00000009749rab2310093.644Oreochromis_niloticus
ENSGAFG00000007684rab239982.203ENSOANG00000001398RAB239982.203Ornithorhynchus_anatinus
ENSGAFG00000007684rab239982.627ENSOCUG00000004816RAB2310081.857Oryctolagus_cuniculus
ENSGAFG00000007684rab2310090.213ENSORLG00000010115rab2310090.213Oryzias_latipes
ENSGAFG00000007684rab2310090.213ENSORLG00020020220rab2310090.213Oryzias_latipes_hni
ENSGAFG00000007684rab2310090.213ENSORLG00015004033rab2310090.213Oryzias_latipes_hsok
ENSGAFG00000007684rab2310091.667ENSOMEG00000001706rab2310091.667Oryzias_melastigma
ENSGAFG00000007684rab239981.780ENSOGAG00000005675RAB2310081.013Otolemur_garnettii
ENSGAFG00000007684rab239980.932ENSOARG00000005749RAB2310080.169Ovis_aries
ENSGAFG00000007684rab239982.203ENSPPAG00000010023RAB2310081.435Pan_paniscus
ENSGAFG00000007684rab239981.780ENSPPRG00000012453RAB2310081.013Panthera_pardus
ENSGAFG00000007684rab239982.203ENSPTIG00000009435RAB2310081.435Panthera_tigris_altaica
ENSGAFG00000007684rab239982.627ENSPTRG00000043341RAB2310081.857Pan_troglodytes
ENSGAFG00000007684rab239982.627ENSPANG00000017772RAB2310081.857Papio_anubis
ENSGAFG00000007684rab237893.750ENSPKIG00000024310rab239586.528Paramormyrops_kingsleyae
ENSGAFG00000007684rab239981.013ENSPSIG00000015579RAB2310081.013Pelodiscus_sinensis
ENSGAFG00000007684rab2310090.196ENSPMGG00000008577rab2310090.196Periophthalmus_magnuspinnatus
ENSGAFG00000007684rab239981.356ENSPEMG00000023271Rab2310080.591Peromyscus_maniculatus_bairdii
ENSGAFG00000007684rab2310067.234ENSPMAG00000006835-10067.234Petromyzon_marinus
ENSGAFG00000007684rab239980.932ENSPCIG00000007267RAB2310080.591Phascolarctos_cinereus
ENSGAFG00000007684rab2310099.149ENSPFOG00000011493rab2310099.149Poecilia_formosa
ENSGAFG00000007684rab2310098.723ENSPLAG00000011697rab2310098.723Poecilia_latipinna
ENSGAFG00000007684rab2310099.149ENSPMEG00000017300rab2310099.149Poecilia_mexicana
ENSGAFG00000007684rab2310098.529ENSPREG00000022509rab2310098.529Poecilia_reticulata
ENSGAFG00000007684rab239982.627ENSPPYG00000016739RAB2310081.857Pongo_abelii
ENSGAFG00000007684rab239982.627ENSPCOG00000028471RAB2310081.857Propithecus_coquereli
ENSGAFG00000007684rab239973.305ENSPVAG00000017693RAB2310072.574Pteropus_vampyrus
ENSGAFG00000007684rab2310093.627ENSPNYG00000019639rab2310093.627Pundamilia_nyererei
ENSGAFG00000007684rab2310086.893ENSPNAG00000024728rab2310086.893Pygocentrus_nattereri
ENSGAFG00000007684rab239981.356ENSRNOG00000012629Rab239981.356Rattus_norvegicus
ENSGAFG00000007684rab239977.593ENSRBIG00000030547RAB2310076.860Rhinopithecus_bieti
ENSGAFG00000007684rab239982.627ENSRROG00000035920RAB2310081.857Rhinopithecus_roxellana
ENSGAFG00000007684rab239981.780ENSSBOG00000033237RAB239981.780Saimiri_boliviensis_boliviensis
ENSGAFG00000007684rab239980.932ENSSHAG00000006379RAB2310080.591Sarcophilus_harrisii
ENSGAFG00000007684rab2310087.379ENSSFOG00015012604rab2310087.379Scleropages_formosus
ENSGAFG00000007684rab239994.872ENSSMAG00000006341rab239994.872Scophthalmus_maximus
ENSGAFG00000007684rab2310095.588ENSSDUG00000023508rab2310095.588Seriola_dumerili
ENSGAFG00000007684rab2310095.588ENSSLDG00000000287rab2310095.588Seriola_lalandi_dorsalis
ENSGAFG00000007684rab239980.932ENSSARG00000013689RAB2310080.169Sorex_araneus
ENSGAFG00000007684rab239983.051ENSSPUG00000006274RAB2310082.700Sphenodon_punctatus
ENSGAFG00000007684rab2310095.098ENSSPAG00000010373rab2310095.098Stegastes_partitus
ENSGAFG00000007684rab239980.976ENSSSCG00000029539RAB239980.976Sus_scrofa
ENSGAFG00000007684rab239981.356ENSTGUG00000012794RAB2310081.013Taeniopygia_guttata
ENSGAFG00000007684rab2310092.647ENSTRUG00000015697rab2310092.647Takifugu_rubripes
ENSGAFG00000007684rab2310090.638ENSTNIG00000016575rab2310090.638Tetraodon_nigroviridis
ENSGAFG00000007684rab239982.203ENSUAMG00000013367RAB2310081.435Ursus_americanus
ENSGAFG00000007684rab239982.203ENSUMAG00000018629RAB2310081.435Ursus_maritimus
ENSGAFG00000007684rab238163.874ENSVPAG00000006805RAB2310063.874Vicugna_pacos
ENSGAFG00000007684rab239982.627ENSVVUG00000008535RAB239982.627Vulpes_vulpes
ENSGAFG00000007684rab239976.793ENSXETG00000004449rab239976.793Xenopus_tropicalis
ENSGAFG00000007684rab2310099.149ENSXCOG00000011864rab2310099.149Xiphophorus_couchianus
ENSGAFG00000007684rab2310099.574ENSXMAG00000009387rab2310099.574Xiphophorus_maculatus

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