EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000007845 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: zgc:153215
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6001 bases
Position: chrNHOQ01000034.1:7680336-7686336
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011554	RRM_1	PF00076.22	1.2e-23	1	2
ENSGAFP00000011554	RRM_1	PF00076.22	1.2e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011672	-	1467	-	ENSGAFP00000011554	488 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007845	zgc:153215	97	41.423	ENSAPOG00000008836	zgc:153215	95	41.423	Acanthochromis_polyacanthus
ENSGAFG00000007845	zgc:153215	98	30.250	ENSAMEG00000007134	RBM12B	56	30.250	Ailuropoda_melanoleuca
ENSGAFG00000007845	zgc:153215	70	31.339	ENSACIG00000014943	rbm12b	97	31.339	Amphilophus_citrinellus
ENSGAFG00000007845	zgc:153215	96	50.620	ENSACIG00000013317	zgc:153215	97	50.620	Amphilophus_citrinellus
ENSGAFG00000007845	zgc:153215	98	47.047	ENSAOCG00000010819	zgc:153215	98	47.638	Amphiprion_ocellaris
ENSGAFG00000007845	zgc:153215	98	32.075	ENSAPEG00000022079	rbm12b	99	31.268	Amphiprion_percula
ENSGAFG00000007845	zgc:153215	98	46.528	ENSATEG00000001886	zgc:153215	98	46.701	Anabas_testudineus
ENSGAFG00000007845	zgc:153215	98	31.445	ENSATEG00000004578	rbm12b	72	32.227	Anabas_testudineus
ENSGAFG00000007845	zgc:153215	98	30.799	ENSANAG00000034015	RBM12B	57	30.799	Aotus_nancymaae
ENSGAFG00000007845	zgc:153215	53	41.892	ENSACLG00000005578	rbm12b	55	41.892	Astatotilapia_calliptera
ENSGAFG00000007845	zgc:153215	98	49.698	ENSACLG00000007675	zgc:153215	98	49.698	Astatotilapia_calliptera
ENSGAFG00000007845	zgc:153215	83	52.688	ENSAMXG00000020853	zgc:153215	71	52.688	Astyanax_mexicanus
ENSGAFG00000007845	zgc:153215	98	30.443	ENSBTAG00000013408	RBM12B	55	30.443	Bos_taurus
ENSGAFG00000007845	zgc:153215	98	30.604	ENSCAFG00020012203	RBM12B	55	30.604	Canis_lupus_dingo
ENSGAFG00000007845	zgc:153215	98	30.829	ENSCHIG00000006790	RBM12B	66	30.829	Capra_hircus
ENSGAFG00000007845	zgc:153215	98	31.189	ENSCAPG00000003543	RBM12B	50	31.189	Cavia_aperea
ENSGAFG00000007845	zgc:153215	98	31.189	ENSCPOG00000007815	RBM12B	50	31.189	Cavia_porcellus
ENSGAFG00000007845	zgc:153215	98	30.344	ENSCLAG00000017617	RBM12B	50	30.344	Chinchilla_lanigera
ENSGAFG00000007845	zgc:153215	98	30.545	ENSCHOG00000008934	RBM12B	50	30.545	Choloepus_hoffmanni
ENSGAFG00000007845	zgc:153215	98	30.916	ENSCPBG00000003061	RBM12B	72	30.916	Chrysemys_picta_bellii
ENSGAFG00000007845	zgc:153215	98	30.000	ENSCSEG00000004610	rbm12b	68	30.000	Cynoglossus_semilaevis
ENSGAFG00000007845	zgc:153215	81	44.750	ENSCSEG00000001575	-	99	44.750	Cynoglossus_semilaevis
ENSGAFG00000007845	zgc:153215	98	52.778	ENSCVAG00000009259	-	97	52.778	Cyprinodon_variegatus
ENSGAFG00000007845	zgc:153215	98	30.315	ENSCVAG00000011047	rbm12b	73	31.102	Cyprinodon_variegatus
ENSGAFG00000007845	zgc:153215	99	35.272	ENSDARG00000055889	zgc:153215	99	35.405	Danio_rerio
ENSGAFG00000007845	zgc:153215	98	30.196	ENSDORG00000024034	-	51	30.196	Dipodomys_ordii
ENSGAFG00000007845	zgc:153215	98	30.291	ENSETEG00000013005	-	64	30.291	Echinops_telfairi
ENSGAFG00000007845	zgc:153215	98	30.058	ENSEASG00005016297	RBM12B	55	30.058	Equus_asinus_asinus
ENSGAFG00000007845	zgc:153215	98	38.790	ENSELUG00000009039	zgc:153215	96	38.790	Esox_lucius
ENSGAFG00000007845	zgc:153215	98	31.189	ENSFCAG00000029274	RBM12B	55	31.189	Felis_catus
ENSGAFG00000007845	zgc:153215	98	64.972	ENSFHEG00000014539	zgc:153215	96	64.972	Fundulus_heteroclitus
ENSGAFG00000007845	zgc:153215	98	30.799	ENSGMOG00000013467	rbm12b	73	30.799	Gadus_morhua
ENSGAFG00000007845	zgc:153215	98	45.263	ENSHBUG00000016150	zgc:153215	98	45.263	Haplochromis_burtoni
ENSGAFG00000007845	zgc:153215	98	30.857	ENSHGLG00000009063	RBM12B	50	30.857	Heterocephalus_glaber_female
ENSGAFG00000007845	zgc:153215	98	30.857	ENSHGLG00100021324	RBM12B	50	30.857	Heterocephalus_glaber_male
ENSGAFG00000007845	zgc:153215	97	34.981	ENSIPUG00000019731	zgc:153215	97	34.981	Ictalurus_punctatus
ENSGAFG00000007845	zgc:153215	98	30.385	ENSSTOG00000027445	RBM12B	57	30.385	Ictidomys_tridecemlineatus
ENSGAFG00000007845	zgc:153215	98	46.228	ENSKMAG00000004958	zgc:153215	98	46.228	Kryptolebias_marmoratus
ENSGAFG00000007845	zgc:153215	98	52.429	ENSLBEG00000002597	zgc:153215	98	52.429	Labrus_bergylta
ENSGAFG00000007845	zgc:153215	98	30.682	ENSLOCG00000018344	rbm12b	73	31.250	Lepisosteus_oculatus
ENSGAFG00000007845	zgc:153215	98	30.452	ENSLAFG00000029949	RBM12B	56	30.452	Loxodonta_africana
ENSGAFG00000007845	zgc:153215	98	30.291	ENSMLEG00000037288	RBM12B	54	30.291	Mandrillus_leucophaeus
ENSGAFG00000007845	zgc:153215	98	30.845	ENSMAMG00000011998	rbm12b	72	30.845	Mastacembelus_armatus
ENSGAFG00000007845	zgc:153215	98	47.302	ENSMAMG00000012038	zgc:153215	98	47.302	Mastacembelus_armatus
ENSGAFG00000007845	zgc:153215	98	45.679	ENSMZEG00005005435	zgc:153215	98	45.679	Maylandia_zebra
ENSGAFG00000007845	zgc:153215	98	30.409	ENSMICG00000036969	RBM12B	56	30.409	Microcebus_murinus
ENSGAFG00000007845	zgc:153215	82	45.055	ENSMMOG00000002404	rbm12b	67	45.055	Mola_mola
ENSGAFG00000007845	zgc:153215	93	51.250	ENSMMOG00000003372	zgc:153215	97	51.250	Mola_mola
ENSGAFG00000007845	zgc:153215	98	30.233	ENSMODG00000007436	RBM12B	65	30.962	Monodelphis_domestica
ENSGAFG00000007845	zgc:153215	99	31.740	ENSMALG00000012059	rbm12b	74	31.740	Monopterus_albus
ENSGAFG00000007845	zgc:153215	98	50.205	ENSMALG00000001222	zgc:153215	98	50.205	Monopterus_albus
ENSGAFG00000007845	zgc:153215	98	30.409	ENSMUSG00000052137	Rbm12b2	57	30.409	Mus_musculus
ENSGAFG00000007845	zgc:153215	98	30.409	ENSMUSG00000046667	Rbm12b1	57	30.409	Mus_musculus
ENSGAFG00000007845	zgc:153215	98	30.078	MGP_SPRETEiJ_G0026765	-	52	30.078	Mus_spretus
ENSGAFG00000007845	zgc:153215	98	30.078	MGP_SPRETEiJ_G0026766	-	57	30.078	Mus_spretus
ENSGAFG00000007845	zgc:153215	98	31.311	ENSMLUG00000002359	RBM12B	50	31.311	Myotis_lucifugus
ENSGAFG00000007845	zgc:153215	98	30.250	ENSNGAG00000002801	-	52	30.250	Nannospalax_galili
ENSGAFG00000007845	zgc:153215	98	45.088	ENSNBRG00000013644	zgc:153215	98	45.088	Neolamprologus_brichardi
ENSGAFG00000007845	zgc:153215	98	30.485	ENSNLEG00000032050	RBM12B	54	30.485	Nomascus_leucogenys
ENSGAFG00000007845	zgc:153215	98	30.171	ENSODEG00000019204	RBM12B	50	30.171	Octodon_degus
ENSGAFG00000007845	zgc:153215	98	47.184	ENSONIG00000006054	zgc:153215	98	47.184	Oreochromis_niloticus
ENSGAFG00000007845	zgc:153215	98	30.636	ENSOCUG00000010353	RBM12B	55	30.636	Oryctolagus_cuniculus
ENSGAFG00000007845	zgc:153215	98	30.392	ENSORLG00000008228	rbm12b	70	30.392	Oryzias_latipes
ENSGAFG00000007845	zgc:153215	98	30.588	ENSORLG00020013619	rbm12b	70	30.588	Oryzias_latipes_hni
ENSGAFG00000007845	zgc:153215	98	30.588	ENSORLG00015019999	rbm12b	70	30.588	Oryzias_latipes_hsok
ENSGAFG00000007845	zgc:153215	98	43.927	ENSOMEG00000004220	zgc:153215	95	43.927	Oryzias_melastigma
ENSGAFG00000007845	zgc:153215	98	30.426	ENSOMEG00000022523	rbm12b	70	30.426	Oryzias_melastigma
ENSGAFG00000007845	zgc:153215	98	30.994	ENSPTIG00000020071	RBM12B	55	30.994	Panthera_tigris_altaica
ENSGAFG00000007845	zgc:153215	98	31.496	ENSPKIG00000018719	rbm12b	72	31.496	Paramormyrops_kingsleyae
ENSGAFG00000007845	zgc:153215	97	36.576	ENSPKIG00000014851	zgc:153215	97	36.576	Paramormyrops_kingsleyae
ENSGAFG00000007845	zgc:153215	98	31.008	ENSPSIG00000001348	RBM12B	72	31.008	Pelodiscus_sinensis
ENSGAFG00000007845	zgc:153215	98	30.469	ENSPCIG00000008556	RBM12B	66	30.934	Phascolarctos_cinereus
ENSGAFG00000007845	zgc:153215	97	30.080	ENSPFOG00000020937	rbm12b	69	30.080	Poecilia_formosa
ENSGAFG00000007845	zgc:153215	99	94.175	ENSPFOG00000017451	zgc:153215	79	94.175	Poecilia_formosa
ENSGAFG00000007845	zgc:153215	97	30.080	ENSPLAG00000018782	rbm12b	72	30.080	Poecilia_latipinna
ENSGAFG00000007845	zgc:153215	99	81.842	ENSPLAG00000000232	zgc:153215	99	81.842	Poecilia_latipinna
ENSGAFG00000007845	zgc:153215	85	95.000	ENSPMEG00000016662	zgc:153215	97	95.000	Poecilia_mexicana
ENSGAFG00000007845	zgc:153215	97	30.080	ENSPREG00000020770	rbm12b	72	31.076	Poecilia_reticulata
ENSGAFG00000007845	zgc:153215	98	88.125	ENSPREG00000018608	zgc:153215	98	88.125	Poecilia_reticulata
ENSGAFG00000007845	zgc:153215	98	30.214	ENSPCOG00000023546	RBM12B	55	30.214	Propithecus_coquereli
ENSGAFG00000007845	zgc:153215	98	31.311	ENSPVAG00000011803	RBM12B	51	31.311	Pteropus_vampyrus
ENSGAFG00000007845	zgc:153215	91	58.586	ENSPNYG00000018125	zgc:153215	95	58.586	Pundamilia_nyererei
ENSGAFG00000007845	zgc:153215	98	30.648	ENSPNAG00000008126	rbm12b	71	31.041	Pygocentrus_nattereri
ENSGAFG00000007845	zgc:153215	98	35.543	ENSPNAG00000025628	zgc:153215	98	35.543	Pygocentrus_nattereri
ENSGAFG00000007845	zgc:153215	98	31.619	ENSRNOG00000055292	LOC679087	64	31.619	Rattus_norvegicus
ENSGAFG00000007845	zgc:153215	98	31.619	ENSRNOG00000016330	Rbm12b	57	31.619	Rattus_norvegicus
ENSGAFG00000007845	zgc:153215	98	30.058	ENSRBIG00000035046	RBM12B	63	30.058	Rhinopithecus_bieti
ENSGAFG00000007845	zgc:153215	98	30.058	ENSRROG00000023660	RBM12B	57	30.058	Rhinopithecus_roxellana
ENSGAFG00000007845	zgc:153215	98	30.604	ENSSBOG00000027592	RBM12B	54	30.604	Saimiri_boliviensis_boliviensis
ENSGAFG00000007845	zgc:153215	98	30.426	ENSSHAG00000015335	RBM12B	66	30.888	Sarcophilus_harrisii
ENSGAFG00000007845	zgc:153215	98	31.429	ENSSFOG00015001584	rbm12b	73	31.810	Scleropages_formosus
ENSGAFG00000007845	zgc:153215	98	36.417	ENSSFOG00015009427	zgc:153215	98	36.417	Scleropages_formosus
ENSGAFG00000007845	zgc:153215	99	46.667	ENSSMAG00000019013	zgc:153215	96	46.667	Scophthalmus_maximus
ENSGAFG00000007845	zgc:153215	98	49.503	ENSSDUG00000012545	zgc:153215	97	49.503	Seriola_dumerili
ENSGAFG00000007845	zgc:153215	98	45.739	ENSSLDG00000013581	zgc:153215	97	46.087	Seriola_lalandi_dorsalis
ENSGAFG00000007845	zgc:153215	98	31.969	ENSSARG00000011845	-	65	31.969	Sorex_araneus
ENSGAFG00000007845	zgc:153215	98	30.118	ENSSPAG00000006774	rbm12b	73	30.118	Stegastes_partitus
ENSGAFG00000007845	zgc:153215	98	43.026	ENSSPAG00000023584	zgc:153215	96	43.222	Stegastes_partitus
ENSGAFG00000007845	zgc:153215	98	30.604	ENSSSCG00000006110	RBM12B	56	30.604	Sus_scrofa
ENSGAFG00000007845	zgc:153215	81	46.040	ENSTNIG00000018374	-	99	46.040	Tetraodon_nigroviridis
ENSGAFG00000007845	zgc:153215	98	30.192	ENSTBEG00000000449	RBM12B	62	30.192	Tupaia_belangeri
ENSGAFG00000007845	zgc:153215	98	30.192	ENSUAMG00000023639	RBM12B	54	30.192	Ursus_americanus
ENSGAFG00000007845	zgc:153215	98	30.250	ENSUMAG00000016008	RBM12B	52	30.250	Ursus_maritimus
ENSGAFG00000007845	zgc:153215	98	30.604	ENSVVUG00000002694	RBM12B	55	30.604	Vulpes_vulpes
ENSGAFG00000007845	zgc:153215	82	36.905	ENSXETG00000025920	-	95	36.905	Xenopus_tropicalis
ENSGAFG00000007845	zgc:153215	83	50.549	ENSXETG00000014694	rbm12b	94	50.549	Xenopus_tropicalis
ENSGAFG00000007845	zgc:153215	98	93.333	ENSXCOG00000019654	zgc:153215	97	93.333	Xiphophorus_couchianus
ENSGAFG00000007845	zgc:153215	98	66.458	ENSXMAG00000013169	-	96	66.458	Xiphophorus_maculatus