EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000007901 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 17547 bases
Position: chrNHOQ01000034.1:7742804-7760350
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011675	ResIII	PF04851.15	2.6e-11	1	1
ENSGAFP00000011649	ResIII	PF04851.15	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011794	-	2541	-	ENSGAFP00000011675	846 (aa)	-	-
ENSGAFT00000011768	-	3079	-	ENSGAFP00000011649	935 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000007901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000007901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000007901	rad54b	59	34.615	ENSGAFG00000001204	hells	56	34.615
ENSGAFG00000007901	rad54b	62	30.249	ENSGAFG00000014337	-	75	30.851
ENSGAFG00000007901	rad54b	71	44.878	ENSGAFG00000011110	rad54l	90	44.481
ENSGAFG00000007901	rad54b	68	31.336	ENSGAFG00000017731	smarca5	52	31.336
ENSGAFG00000007901	rad54b	59	32.411	ENSGAFG00000018198	chd1l	52	30.237
ENSGAFG00000007901	rad54b	52	31.399	ENSGAFG00000015210	-	80	31.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000007901	rad54b	84	58.607	ENSG00000265817	FSBP	99	58.607	Homo_sapiens
ENSGAFG00000007901	rad54b	99	54.585	ENSG00000197275	RAD54B	99	54.585	Homo_sapiens
ENSGAFG00000007901	rad54b	99	55.786	ENSAMEG00000005834	-	99	55.786	Ailuropoda_melanoleuca
ENSGAFG00000007901	rad54b	99	82.400	ENSACIG00000013005	rad54b	99	82.400	Amphilophus_citrinellus
ENSGAFG00000007901	rad54b	98	85.714	ENSAOCG00000008523	rad54b	99	82.585	Amphiprion_ocellaris
ENSGAFG00000007901	rad54b	99	77.929	ENSAPEG00000001673	rad54b	99	77.929	Amphiprion_percula
ENSGAFG00000007901	rad54b	98	83.730	ENSATEG00000001527	rad54b	99	82.019	Anabas_testudineus
ENSGAFG00000007901	rad54b	100	57.883	ENSAPLG00000014366	-	100	57.883	Anas_platyrhynchos
ENSGAFG00000007901	rad54b	92	60.483	ENSACAG00000003671	-	98	60.710	Anolis_carolinensis
ENSGAFG00000007901	rad54b	75	60.465	ENSANAG00000019528	-	99	60.714	Aotus_nancymaae
ENSGAFG00000007901	rad54b	99	83.702	ENSACLG00000007826	rad54b	99	85.112	Astatotilapia_calliptera
ENSGAFG00000007901	rad54b	91	67.939	ENSAMXG00000039985	rad54b	95	67.746	Astyanax_mexicanus
ENSGAFG00000007901	rad54b	99	54.989	ENSBTAG00000000632	RAD54B	99	54.835	Bos_taurus
ENSGAFG00000007901	rad54b	84	36.011	WBGene00013792	Y116A8C.13	83	36.303	Caenorhabditis_elegans
ENSGAFG00000007901	rad54b	99	54.913	ENSCJAG00000000080	-	99	58.904	Callithrix_jacchus
ENSGAFG00000007901	rad54b	99	56.441	ENSCAFG00000009179	RAD54B	99	56.441	Canis_familiaris
ENSGAFG00000007901	rad54b	99	56.441	ENSCAFG00020012084	-	99	56.441	Canis_lupus_dingo
ENSGAFG00000007901	rad54b	99	55.202	ENSCHIG00000008230	-	99	55.048	Capra_hircus
ENSGAFG00000007901	rad54b	99	55.277	ENSTSYG00000013234	-	99	55.277	Carlito_syrichta
ENSGAFG00000007901	rad54b	100	55.799	ENSCPOG00000011643	-	100	55.799	Cavia_porcellus
ENSGAFG00000007901	rad54b	99	54.973	ENSCCAG00000011754	-	99	58.824	Cebus_capucinus
ENSGAFG00000007901	rad54b	99	54.376	ENSCATG00000030661	-	99	58.527	Cercocebus_atys
ENSGAFG00000007901	rad54b	99	56.404	ENSCLAG00000010476	-	99	56.404	Chinchilla_lanigera
ENSGAFG00000007901	rad54b	99	54.216	ENSCSAG00000012712	-	99	54.002	Chlorocebus_sabaeus
ENSGAFG00000007901	rad54b	99	57.692	ENSCPBG00000003204	-	98	59.698	Chrysemys_picta_bellii
ENSGAFG00000007901	rad54b	99	54.595	ENSCANG00000017939	-	99	58.936	Colobus_angolensis_palliatus
ENSGAFG00000007901	rad54b	99	55.556	ENSCGRG00001020184	Rad54b	99	55.556	Cricetulus_griseus_chok1gshd
ENSGAFG00000007901	rad54b	99	54.120	ENSCGRG00000016752	Rad54b	99	54.120	Cricetulus_griseus_crigri
ENSGAFG00000007901	rad54b	99	80.165	ENSCSEG00000001601	rad54b	99	81.156	Cynoglossus_semilaevis
ENSGAFG00000007901	rad54b	99	86.997	ENSCVAG00000009200	rad54b	99	86.997	Cyprinodon_variegatus
ENSGAFG00000007901	rad54b	99	63.751	ENSDARG00000092134	rad54b	99	68.545	Danio_rerio
ENSGAFG00000007901	rad54b	96	61.538	ENSDNOG00000015535	-	99	55.202	Dasypus_novemcinctus
ENSGAFG00000007901	rad54b	99	56.580	ENSDORG00000002492	Rad54b	99	56.580	Dipodomys_ordii
ENSGAFG00000007901	rad54b	87	57.335	ENSETEG00000010605	-	100	57.335	Echinops_telfairi
ENSGAFG00000007901	rad54b	100	46.826	ENSEBUG00000009104	rad54b	99	47.077	Eptatretus_burgeri
ENSGAFG00000007901	rad54b	92	59.171	ENSEASG00005004021	-	89	59.171	Equus_asinus_asinus
ENSGAFG00000007901	rad54b	99	54.259	ENSECAG00000021949	-	99	54.105	Equus_caballus
ENSGAFG00000007901	rad54b	76	52.201	ENSEEUG00000008056	-	72	52.201	Erinaceus_europaeus
ENSGAFG00000007901	rad54b	99	77.068	ENSELUG00000009287	rad54b	99	71.716	Esox_lucius
ENSGAFG00000007901	rad54b	99	55.556	ENSFCAG00000015513	-	99	59.918	Felis_catus
ENSGAFG00000007901	rad54b	99	57.889	ENSFALG00000005467	-	99	57.998	Ficedula_albicollis
ENSGAFG00000007901	rad54b	99	56.154	ENSFDAG00000020541	-	99	56.154	Fukomys_damarensis
ENSGAFG00000007901	rad54b	92	86.473	ENSFHEG00000014382	rad54b	90	85.194	Fundulus_heteroclitus
ENSGAFG00000007901	rad54b	91	79.087	ENSGMOG00000014774	rad54b	98	79.848	Gadus_morhua
ENSGAFG00000007901	rad54b	100	58.099	ENSGALG00000043597	RAD54B	100	58.099	Gallus_gallus
ENSGAFG00000007901	rad54b	99	82.071	ENSGACG00000009128	rad54b	93	82.071	Gasterosteus_aculeatus
ENSGAFG00000007901	rad54b	99	57.433	ENSGAGG00000018747	-	99	57.540	Gopherus_agassizii
ENSGAFG00000007901	rad54b	99	54.367	ENSGGOG00000023516	-	99	54.367	Gorilla_gorilla
ENSGAFG00000007901	rad54b	99	82.892	ENSHBUG00000016017	rad54b	99	82.246	Haplochromis_burtoni
ENSGAFG00000007901	rad54b	99	55.351	ENSHGLG00000008263	RAD54B	98	55.351	Heterocephalus_glaber_female
ENSGAFG00000007901	rad54b	99	54.672	ENSHGLG00100008108	-	98	54.672	Heterocephalus_glaber_male
ENSGAFG00000007901	rad54b	99	72.676	ENSHCOG00000004764	rad54b	98	74.629	Hippocampus_comes
ENSGAFG00000007901	rad54b	97	65.274	ENSIPUG00000018531	rad54b	99	61.466	Ictalurus_punctatus
ENSGAFG00000007901	rad54b	99	54.180	ENSSTOG00000010791	-	99	54.180	Ictidomys_tridecemlineatus
ENSGAFG00000007901	rad54b	99	54.705	ENSJJAG00000010314	Rad54b	99	54.705	Jaculus_jaculus
ENSGAFG00000007901	rad54b	99	81.486	ENSKMAG00000004744	rad54b	99	81.486	Kryptolebias_marmoratus
ENSGAFG00000007901	rad54b	87	63.576	ENSLACG00000000859	-	100	63.624	Latimeria_chalumnae
ENSGAFG00000007901	rad54b	97	66.706	ENSLOCG00000010100	rad54b	98	67.221	Lepisosteus_oculatus
ENSGAFG00000007901	rad54b	91	58.756	ENSLAFG00000015315	-	97	58.756	Loxodonta_africana
ENSGAFG00000007901	rad54b	99	54.376	ENSMFAG00000031629	-	99	58.527	Macaca_fascicularis
ENSGAFG00000007901	rad54b	99	54.376	ENSMMUG00000005659	-	99	54.376	Macaca_mulatta
ENSGAFG00000007901	rad54b	99	54.545	ENSMNEG00000016408	-	99	54.545	Macaca_nemestrina
ENSGAFG00000007901	rad54b	99	54.267	ENSMLEG00000006946	-	99	54.267	Mandrillus_leucophaeus
ENSGAFG00000007901	rad54b	99	79.361	ENSMAMG00000012269	rad54b	99	79.361	Mastacembelus_armatus
ENSGAFG00000007901	rad54b	99	82.892	ENSMZEG00005005281	rad54b	99	83.535	Maylandia_zebra
ENSGAFG00000007901	rad54b	100	57.143	ENSMGAG00000012024	-	100	57.143	Meleagris_gallopavo
ENSGAFG00000007901	rad54b	99	55.631	ENSMAUG00000013586	Rad54b	99	55.631	Mesocricetus_auratus
ENSGAFG00000007901	rad54b	99	55.669	ENSMICG00000000754	-	100	55.669	Microcebus_murinus
ENSGAFG00000007901	rad54b	100	55.432	ENSMOCG00000020035	Rad54b	100	55.506	Microtus_ochrogaster
ENSGAFG00000007901	rad54b	99	79.205	ENSMMOG00000003394	rad54b	99	79.205	Mola_mola
ENSGAFG00000007901	rad54b	93	59.000	ENSMODG00000007343	-	98	59.000	Monodelphis_domestica
ENSGAFG00000007901	rad54b	74	84.494	ENSMALG00000001520	rad54b	99	84.494	Monopterus_albus
ENSGAFG00000007901	rad54b	99	55.028	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.028	Mus_caroli
ENSGAFG00000007901	rad54b	99	54.102	ENSMUSG00000078773	Rad54b	99	54.102	Mus_musculus
ENSGAFG00000007901	rad54b	99	54.989	MGP_PahariEiJ_G0023933	Rad54b	99	54.989	Mus_pahari
ENSGAFG00000007901	rad54b	99	54.535	MGP_SPRETEiJ_G0026758	Rad54b	99	54.535	Mus_spretus
ENSGAFG00000007901	rad54b	92	60.000	ENSMPUG00000008878	-	97	60.126	Mustela_putorius_furo
ENSGAFG00000007901	rad54b	99	54.401	ENSMLUG00000008953	-	99	54.246	Myotis_lucifugus
ENSGAFG00000007901	rad54b	99	54.874	ENSNGAG00000017537	Rad54b	99	54.874	Nannospalax_galili
ENSGAFG00000007901	rad54b	99	83.935	ENSNBRG00000013394	rad54b	99	85.360	Neolamprologus_brichardi
ENSGAFG00000007901	rad54b	100	54.397	ENSNLEG00000003062	-	100	58.209	Nomascus_leucogenys
ENSGAFG00000007901	rad54b	76	61.275	ENSMEUG00000012426	-	71	61.275	Notamacropus_eugenii
ENSGAFG00000007901	rad54b	83	61.972	ENSODEG00000002650	-	96	77.273	Octodon_degus
ENSGAFG00000007901	rad54b	99	56.326	ENSODEG00000019564	-	99	56.326	Octodon_degus
ENSGAFG00000007901	rad54b	99	83.673	ENSONIG00000006067	rad54b	99	82.799	Oreochromis_niloticus
ENSGAFG00000007901	rad54b	87	60.582	ENSOANG00000011348	-	99	60.582	Ornithorhynchus_anatinus
ENSGAFG00000007901	rad54b	99	54.733	ENSOCUG00000016478	-	99	54.853	Oryctolagus_cuniculus
ENSGAFG00000007901	rad54b	98	82.397	ENSORLG00000008918	rad54b	99	85.514	Oryzias_latipes
ENSGAFG00000007901	rad54b	74	84.268	ENSORLG00020012171	rad54b	99	85.358	Oryzias_latipes_hni
ENSGAFG00000007901	rad54b	99	80.882	ENSORLG00015018536	rad54b	99	79.215	Oryzias_latipes_hsok
ENSGAFG00000007901	rad54b	90	84.031	ENSOMEG00000004345	rad54b	99	84.156	Oryzias_melastigma
ENSGAFG00000007901	rad54b	99	53.813	ENSOGAG00000007854	-	100	53.813	Otolemur_garnettii
ENSGAFG00000007901	rad54b	92	60.250	ENSOARG00000007691	-	98	60.250	Ovis_aries
ENSGAFG00000007901	rad54b	99	53.384	ENSPPAG00000029572	-	99	53.384	Pan_paniscus
ENSGAFG00000007901	rad54b	99	55.229	ENSPPRG00000007571	-	99	59.647	Panthera_pardus
ENSGAFG00000007901	rad54b	85	59.482	ENSPTIG00000012670	-	99	59.647	Panthera_tigris_altaica
ENSGAFG00000007901	rad54b	99	54.476	ENSPTRG00000020427	-	99	58.333	Pan_troglodytes
ENSGAFG00000007901	rad54b	99	54.376	ENSPANG00000019566	-	99	54.376	Papio_anubis
ENSGAFG00000007901	rad54b	99	63.713	ENSPKIG00000014974	rad54b	99	63.502	Paramormyrops_kingsleyae
ENSGAFG00000007901	rad54b	99	57.112	ENSPSIG00000002383	-	95	62.705	Pelodiscus_sinensis
ENSGAFG00000007901	rad54b	99	56.062	ENSPEMG00000012133	Rad54b	99	56.062	Peromyscus_maniculatus_bairdii
ENSGAFG00000007901	rad54b	91	58.534	ENSPMAG00000002916	rad54b	98	58.534	Petromyzon_marinus
ENSGAFG00000007901	rad54b	92	60.051	ENSPCIG00000020151	-	92	60.051	Phascolarctos_cinereus
ENSGAFG00000007901	rad54b	100	95.411	ENSPFOG00000023411	rad54b	100	95.411	Poecilia_formosa
ENSGAFG00000007901	rad54b	100	95.411	ENSPLAG00000010430	rad54b	100	95.411	Poecilia_latipinna
ENSGAFG00000007901	rad54b	100	95.731	ENSPMEG00000016873	rad54b	100	95.731	Poecilia_mexicana
ENSGAFG00000007901	rad54b	100	95.518	ENSPREG00000018443	rad54b	100	95.518	Poecilia_reticulata
ENSGAFG00000007901	rad54b	99	54.417	ENSPPYG00000018750	-	99	54.417	Pongo_abelii
ENSGAFG00000007901	rad54b	99	54.940	ENSPCOG00000026845	-	100	58.288	Propithecus_coquereli
ENSGAFG00000007901	rad54b	87	58.211	ENSPVAG00000000261	-	86	58.267	Pteropus_vampyrus
ENSGAFG00000007901	rad54b	94	83.438	ENSPNYG00000018303	rad54b	97	83.438	Pundamilia_nyererei
ENSGAFG00000007901	rad54b	99	66.040	ENSPNAG00000000295	rad54b	99	66.040	Pygocentrus_nattereri
ENSGAFG00000007901	rad54b	99	55.333	ENSRNOG00000039949	Rad54b	99	55.211	Rattus_norvegicus
ENSGAFG00000007901	rad54b	99	54.267	ENSRBIG00000020419	-	99	54.267	Rhinopithecus_bieti
ENSGAFG00000007901	rad54b	99	54.267	ENSRROG00000039897	-	99	54.267	Rhinopithecus_roxellana
ENSGAFG00000007901	rad54b	91	35.354	YBR073W	RDH54	88	35.698	Saccharomyces_cerevisiae
ENSGAFG00000007901	rad54b	99	54.913	ENSSBOG00000028501	-	99	54.913	Saimiri_boliviensis_boliviensis
ENSGAFG00000007901	rad54b	99	54.689	ENSSHAG00000017038	-	99	54.584	Sarcophilus_harrisii
ENSGAFG00000007901	rad54b	67	71.378	ENSSFOG00015008483	rad54b	89	71.529	Scleropages_formosus
ENSGAFG00000007901	rad54b	98	83.965	ENSSMAG00000018659	rad54b	99	83.081	Scophthalmus_maximus
ENSGAFG00000007901	rad54b	96	83.929	ENSSDUG00000001122	rad54b	97	81.630	Seriola_dumerili
ENSGAFG00000007901	rad54b	99	82.715	ENSSLDG00000013787	rad54b	99	82.609	Seriola_lalandi_dorsalis
ENSGAFG00000007901	rad54b	99	58.501	ENSSPUG00000016497	-	100	58.501	Sphenodon_punctatus
ENSGAFG00000007901	rad54b	99	82.633	ENSSPAG00000012800	rad54b	99	82.633	Stegastes_partitus
ENSGAFG00000007901	rad54b	99	55.088	ENSSSCG00000006101	-	98	59.398	Sus_scrofa
ENSGAFG00000007901	rad54b	99	58.089	ENSTGUG00000011880	-	99	58.089	Taeniopygia_guttata
ENSGAFG00000007901	rad54b	99	80.074	ENSTRUG00000010015	rad54b	99	76.402	Takifugu_rubripes
ENSGAFG00000007901	rad54b	99	51.684	ENSTTRG00000006312	-	99	51.528	Tursiops_truncatus
ENSGAFG00000007901	rad54b	99	56.004	ENSUMAG00000016401	-	99	56.004	Ursus_maritimus
ENSGAFG00000007901	rad54b	99	54.575	ENSVPAG00000003157	-	99	54.575	Vicugna_pacos
ENSGAFG00000007901	rad54b	99	50.554	ENSXETG00000025924	rad54b	98	54.625	Xenopus_tropicalis
ENSGAFG00000007901	rad54b	100	94.988	ENSXMAG00000013141	rad54b	99	97.297	Xiphophorus_maculatus