EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008048 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6278 bases
Position: chrNHOQ01001160.1:259844-266121
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000011873	Ribosomal_S18	PF01084.20	7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000011994	-	4620	-	ENSGAFP00000011873	155 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008048	mrps18c	83	64.341	ENSAPOG00000019045	mrps18c	100	64.341	Acanthochromis_polyacanthus
ENSGAFG00000008048	mrps18c	59	75.000	ENSACIG00000020253	mrps18c	91	75.000	Amphilophus_citrinellus
ENSGAFG00000008048	mrps18c	83	61.240	ENSAOCG00000014338	mrps18c	100	61.240	Amphiprion_ocellaris
ENSGAFG00000008048	mrps18c	56	78.161	ENSAPEG00000023068	-	87	75.000	Amphiprion_percula
ENSGAFG00000008048	mrps18c	83	61.240	ENSAPEG00000022956	mrps18c	100	61.240	Amphiprion_percula
ENSGAFG00000008048	mrps18c	83	67.692	ENSATEG00000023417	mrps18c	100	67.692	Anabas_testudineus
ENSGAFG00000008048	mrps18c	57	64.045	ENSAPLG00000012544	-	86	64.045	Anas_platyrhynchos
ENSGAFG00000008048	mrps18c	60	80.645	ENSACLG00000010521	mrps18c	91	80.645	Astatotilapia_calliptera
ENSGAFG00000008048	mrps18c	59	72.527	ENSAMXG00000012238	mrps18c	92	72.527	Astyanax_mexicanus
ENSGAFG00000008048	mrps18c	77	56.452	ENSCPBG00000007783	-	76	56.452	Chrysemys_picta_bellii
ENSGAFG00000008048	mrps18c	66	68.627	ENSCSEG00000000711	mrps18c	72	68.627	Cynoglossus_semilaevis
ENSGAFG00000008048	mrps18c	83	75.000	ENSCVAG00000020169	mrps18c	100	75.000	Cyprinodon_variegatus
ENSGAFG00000008048	mrps18c	77	62.903	ENSDARG00000069624	mrps18c	91	62.903	Danio_rerio
ENSGAFG00000008048	mrps18c	68	67.593	ENSELUG00000024603	mrps18c	81	67.593	Esox_lucius
ENSGAFG00000008048	mrps18c	83	81.250	ENSFHEG00000018752	-	100	81.250	Fundulus_heteroclitus
ENSGAFG00000008048	mrps18c	86	80.451	ENSFHEG00000015550	mrps18c	99	80.451	Fundulus_heteroclitus
ENSGAFG00000008048	mrps18c	72	54.386	ENSGALG00000023191	MRPS18C	79	54.386	Gallus_gallus
ENSGAFG00000008048	mrps18c	66	62.136	ENSGAGG00000015144	-	73	62.136	Gopherus_agassizii
ENSGAFG00000008048	mrps18c	83	67.692	ENSHBUG00000002008	mrps18c	100	67.692	Haplochromis_burtoni
ENSGAFG00000008048	mrps18c	68	71.296	ENSHCOG00000013161	mrps18c	82	71.296	Hippocampus_comes
ENSGAFG00000008048	mrps18c	59	67.033	ENSIPUG00000003783	mrps18c	88	67.033	Ictalurus_punctatus
ENSGAFG00000008048	mrps18c	83	75.000	ENSKMAG00000016467	mrps18c	100	75.000	Kryptolebias_marmoratus
ENSGAFG00000008048	mrps18c	83	65.385	ENSLBEG00000021861	mrps18c	100	65.385	Labrus_bergylta
ENSGAFG00000008048	mrps18c	83	65.385	ENSLBEG00000019174	mrps18c	100	65.385	Labrus_bergylta
ENSGAFG00000008048	mrps18c	81	54.545	ENSLACG00000011243	mrps18c	100	54.545	Latimeria_chalumnae
ENSGAFG00000008048	mrps18c	71	61.818	ENSLOCG00000012115	mrps18c	78	61.818	Lepisosteus_oculatus
ENSGAFG00000008048	mrps18c	83	60.448	ENSMAMG00000012386	mrps18c	100	60.448	Mastacembelus_armatus
ENSGAFG00000008048	mrps18c	83	67.692	ENSMZEG00005023278	mrps18c	100	67.692	Maylandia_zebra
ENSGAFG00000008048	mrps18c	60	78.495	ENSMMOG00000011316	mrps18c	71	78.495	Mola_mola
ENSGAFG00000008048	mrps18c	83	67.692	ENSNBRG00000006182	mrps18c	100	67.692	Neolamprologus_brichardi
ENSGAFG00000008048	mrps18c	56	65.517	ENSMEUG00000010972	-	69	65.517	Notamacropus_eugenii
ENSGAFG00000008048	mrps18c	85	66.917	ENSONIG00000012527	mrps18c	91	80.435	Oreochromis_niloticus
ENSGAFG00000008048	mrps18c	83	63.566	ENSORLG00015006869	mrps18c	100	63.566	Oryzias_latipes_hsok
ENSGAFG00000008048	mrps18c	57	73.034	ENSOMEG00000005009	mrps18c	86	73.034	Oryzias_melastigma
ENSGAFG00000008048	mrps18c	66	70.874	ENSPKIG00000021736	mrps18c	75	70.874	Paramormyrops_kingsleyae
ENSGAFG00000008048	mrps18c	59	74.725	ENSPMGG00000002991	mrps18c	92	74.725	Periophthalmus_magnuspinnatus
ENSGAFG00000008048	mrps18c	100	91.613	ENSPFOG00000002351	mrps18c	100	91.613	Poecilia_formosa
ENSGAFG00000008048	mrps18c	83	92.969	ENSPLAG00000015187	mrps18c	100	92.969	Poecilia_latipinna
ENSGAFG00000008048	mrps18c	100	91.613	ENSPMEG00000014488	mrps18c	100	91.613	Poecilia_mexicana
ENSGAFG00000008048	mrps18c	55	94.118	ENSPREG00000012593	mrps18c	87	94.118	Poecilia_reticulata
ENSGAFG00000008048	mrps18c	83	66.923	ENSPNYG00000010654	mrps18c	100	66.923	Pundamilia_nyererei
ENSGAFG00000008048	mrps18c	62	67.708	ENSPNAG00000009350	mrps18c	85	70.330	Pygocentrus_nattereri
ENSGAFG00000008048	mrps18c	83	62.308	ENSSFOG00015019444	mrps18c	93	62.308	Scleropages_formosus
ENSGAFG00000008048	mrps18c	83	66.406	ENSSDUG00000015676	mrps18c	100	66.406	Seriola_dumerili
ENSGAFG00000008048	mrps18c	68	66.379	ENSSLDG00000002034	mrps18c	90	66.379	Seriola_lalandi_dorsalis
ENSGAFG00000008048	mrps18c	66	56.311	ENSSPUG00000013990	-	72	56.311	Sphenodon_punctatus
ENSGAFG00000008048	mrps18c	82	63.281	ENSSPAG00000008687	mrps18c	99	63.281	Stegastes_partitus
ENSGAFG00000008048	mrps18c	83	59.231	ENSTRUG00000024403	mrps18c	100	59.231	Takifugu_rubripes
ENSGAFG00000008048	mrps18c	83	62.308	ENSTNIG00000005674	mrps18c	100	62.308	Tetraodon_nigroviridis
ENSGAFG00000008048	mrps18c	58	65.556	ENSXETG00000027597	mrps18c	69	65.556	Xenopus_tropicalis
ENSGAFG00000008048	mrps18c	100	85.806	ENSXCOG00000016208	mrps18c	100	85.806	Xiphophorus_couchianus
ENSGAFG00000008048	mrps18c	100	94.194	ENSXMAG00000012555	mrps18c	100	94.194	Xiphophorus_maculatus