EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008130 (Gene tree)
Gene ID: -
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5891 bases
Position: chrNHOQ01000843.1:858587-864477
Accession: ZDB-GENE-030131-6420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012005	SAP	PF02037.27	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012129	-	1782	-	ENSGAFP00000012005	593 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008130	xrcc6	99	55.065	ENSG00000196419	XRCC6	99	55.065	Homo_sapiens
ENSGAFG00000008130	xrcc6	99	83.553	ENSAPOG00000012704	xrcc6	100	83.553	Acanthochromis_polyacanthus
ENSGAFG00000008130	xrcc6	100	83.279	ENSACIG00000021277	xrcc6	100	83.279	Amphilophus_citrinellus
ENSGAFG00000008130	xrcc6	100	83.607	ENSAOCG00000021344	xrcc6	100	83.607	Amphiprion_ocellaris
ENSGAFG00000008130	xrcc6	100	83.770	ENSAPEG00000020712	xrcc6	100	83.770	Amphiprion_percula
ENSGAFG00000008130	xrcc6	100	82.459	ENSATEG00000007119	xrcc6	100	82.459	Anabas_testudineus
ENSGAFG00000008130	xrcc6	89	60.146	ENSAPLG00000004469	XRCC6	98	60.146	Anas_platyrhynchos
ENSGAFG00000008130	xrcc6	99	48.355	ENSANAG00000020017	-	99	48.191	Aotus_nancymaae
ENSGAFG00000008130	xrcc6	99	54.739	ENSANAG00000018684	XRCC6	99	55.229	Aotus_nancymaae
ENSGAFG00000008130	xrcc6	99	48.366	ENSANAG00000035230	-	99	48.693	Aotus_nancymaae
ENSGAFG00000008130	xrcc6	99	46.003	ENSANAG00000023445	-	99	46.493	Aotus_nancymaae
ENSGAFG00000008130	xrcc6	100	83.934	ENSACLG00000018608	xrcc6	100	83.934	Astatotilapia_calliptera
ENSGAFG00000008130	xrcc6	99	75.369	ENSAMXG00000007545	xrcc6	100	75.369	Astyanax_mexicanus
ENSGAFG00000008130	xrcc6	99	54.739	ENSCJAG00000045512	XRCC6	99	55.229	Callithrix_jacchus
ENSGAFG00000008130	xrcc6	99	54.575	ENSTSYG00000011348	XRCC6	99	54.739	Carlito_syrichta
ENSGAFG00000008130	xrcc6	99	51.639	ENSCCAG00000030041	-	95	51.311	Cebus_capucinus
ENSGAFG00000008130	xrcc6	99	43.822	ENSCCAG00000035711	-	99	44.316	Cebus_capucinus
ENSGAFG00000008130	xrcc6	99	46.256	ENSCCAG00000030468	-	99	46.755	Cebus_capucinus
ENSGAFG00000008130	xrcc6	99	46.217	ENSCCAG00000037663	-	97	46.217	Cebus_capucinus
ENSGAFG00000008130	xrcc6	99	55.229	ENSCATG00000042366	XRCC6	98	56.239	Cercocebus_atys
ENSGAFG00000008130	xrcc6	99	54.828	ENSCLAG00000016669	XRCC6	99	54.992	Chinchilla_lanigera
ENSGAFG00000008130	xrcc6	99	55.229	ENSCSAG00000005784	XRCC6	99	55.229	Chlorocebus_sabaeus
ENSGAFG00000008130	xrcc6	99	58.621	ENSCPBG00000020535	XRCC6	99	58.785	Chrysemys_picta_bellii
ENSGAFG00000008130	xrcc6	99	33.114	ENSCING00000000633	-	95	33.679	Ciona_intestinalis
ENSGAFG00000008130	xrcc6	99	55.229	ENSCANG00000031032	XRCC6	99	55.229	Colobus_angolensis_palliatus
ENSGAFG00000008130	xrcc6	99	50.906	ENSCGRG00001019029	Xrcc6	99	50.906	Cricetulus_griseus_chok1gshd
ENSGAFG00000008130	xrcc6	99	55.410	ENSCGRG00000001528	Xrcc6	99	55.684	Cricetulus_griseus_crigri
ENSGAFG00000008130	xrcc6	100	77.541	ENSCSEG00000020434	xrcc6	100	77.377	Cynoglossus_semilaevis
ENSGAFG00000008130	xrcc6	100	86.885	ENSCVAG00000002189	xrcc6	100	86.885	Cyprinodon_variegatus
ENSGAFG00000008130	xrcc6	99	73.191	ENSDARG00000071551	xrcc6	99	73.191	Danio_rerio
ENSGAFG00000008130	xrcc6	77	51.582	ENSETEG00000015333	-	67	51.582	Echinops_telfairi
ENSGAFG00000008130	xrcc6	99	54.664	ENSEASG00005001514	XRCC6	99	54.828	Equus_asinus_asinus
ENSGAFG00000008130	xrcc6	99	54.828	ENSECAG00000017563	XRCC6	99	55.221	Equus_caballus
ENSGAFG00000008130	xrcc6	100	73.279	ENSELUG00000020301	xrcc6	100	73.279	Esox_lucius
ENSGAFG00000008130	xrcc6	99	58.891	ENSFALG00000011908	XRCC6	96	58.891	Ficedula_albicollis
ENSGAFG00000008130	xrcc6	100	89.672	ENSFHEG00000016833	xrcc6	100	89.672	Fundulus_heteroclitus
ENSGAFG00000008130	xrcc6	92	80.077	ENSGMOG00000013524	xrcc6	90	80.077	Gadus_morhua
ENSGAFG00000008130	xrcc6	99	57.492	ENSGALG00000011932	XRCC6	94	58.904	Gallus_gallus
ENSGAFG00000008130	xrcc6	99	80.619	ENSGACG00000004868	xrcc6	99	80.619	Gasterosteus_aculeatus
ENSGAFG00000008130	xrcc6	99	58.456	ENSGAGG00000017518	XRCC6	99	58.621	Gopherus_agassizii
ENSGAFG00000008130	xrcc6	99	55.065	ENSGGOG00000015885	XRCC6	96	58.772	Gorilla_gorilla
ENSGAFG00000008130	xrcc6	93	83.922	ENSHBUG00000023281	xrcc6	100	83.922	Haplochromis_burtoni
ENSGAFG00000008130	xrcc6	99	54.426	ENSHGLG00000018078	XRCC6	99	54.426	Heterocephalus_glaber_female
ENSGAFG00000008130	xrcc6	99	54.426	ENSHGLG00100011264	XRCC6	99	54.426	Heterocephalus_glaber_male
ENSGAFG00000008130	xrcc6	100	76.066	ENSHCOG00000009821	xrcc6	100	76.066	Hippocampus_comes
ENSGAFG00000008130	xrcc6	99	73.355	ENSIPUG00000000767	xrcc6	99	73.355	Ictalurus_punctatus
ENSGAFG00000008130	xrcc6	99	54.501	ENSSTOG00000009490	XRCC6	99	54.501	Ictidomys_tridecemlineatus
ENSGAFG00000008130	xrcc6	99	50.820	ENSJJAG00000017136	Xrcc6	99	51.724	Jaculus_jaculus
ENSGAFG00000008130	xrcc6	99	85.878	ENSKMAG00000002141	xrcc6	99	85.878	Kryptolebias_marmoratus
ENSGAFG00000008130	xrcc6	99	82.237	ENSLBEG00000002691	xrcc6	99	82.237	Labrus_bergylta
ENSGAFG00000008130	xrcc6	87	63.366	ENSLOCG00000011533	xrcc6	99	63.366	Lepisosteus_oculatus
ENSGAFG00000008130	xrcc6	99	55.229	ENSMFAG00000003352	XRCC6	99	55.229	Macaca_fascicularis
ENSGAFG00000008130	xrcc6	99	55.229	ENSMMUG00000001856	XRCC6	99	55.229	Macaca_mulatta
ENSGAFG00000008130	xrcc6	99	55.229	ENSMNEG00000035076	XRCC6	99	55.229	Macaca_nemestrina
ENSGAFG00000008130	xrcc6	99	55.229	ENSMLEG00000019869	XRCC6	99	55.229	Mandrillus_leucophaeus
ENSGAFG00000008130	xrcc6	96	80.645	ENSMAMG00000003405	xrcc6	97	80.645	Mastacembelus_armatus
ENSGAFG00000008130	xrcc6	100	81.475	ENSMAMG00000003368	xrcc6	100	81.475	Mastacembelus_armatus
ENSGAFG00000008130	xrcc6	100	83.770	ENSMZEG00005028080	xrcc6	100	83.770	Maylandia_zebra
ENSGAFG00000008130	xrcc6	99	57.818	ENSMGAG00000012146	XRCC6	99	57.724	Meleagris_gallopavo
ENSGAFG00000008130	xrcc6	99	55.574	ENSMAUG00000017340	Xrcc6	99	55.848	Mesocricetus_auratus
ENSGAFG00000008130	xrcc6	99	55.025	ENSMOCG00000015717	Xrcc6	99	55.519	Microtus_ochrogaster
ENSGAFG00000008130	xrcc6	100	78.818	ENSMMOG00000003536	xrcc6	99	78.818	Mola_mola
ENSGAFG00000008130	xrcc6	100	82.295	ENSMALG00000013912	xrcc6	95	82.131	Monopterus_albus
ENSGAFG00000008130	xrcc6	99	51.967	MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.967	Mus_caroli
ENSGAFG00000008130	xrcc6	99	56.393	ENSMUSG00000022471	Xrcc6	99	60.076	Mus_musculus
ENSGAFG00000008130	xrcc6	99	56.230	MGP_PahariEiJ_G0020069	Xrcc6	99	56.230	Mus_pahari
ENSGAFG00000008130	xrcc6	96	57.192	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	Mus_spretus
ENSGAFG00000008130	xrcc6	99	55.738	ENSNGAG00000013750	Xrcc6	99	56.013	Nannospalax_galili
ENSGAFG00000008130	xrcc6	100	83.607	ENSNBRG00000004125	xrcc6	100	83.607	Neolamprologus_brichardi
ENSGAFG00000008130	xrcc6	95	57.315	ENSOPRG00000002386	XRCC6	99	57.315	Ochotona_princeps
ENSGAFG00000008130	xrcc6	99	54.337	ENSODEG00000015847	XRCC6	99	54.337	Octodon_degus
ENSGAFG00000008130	xrcc6	100	83.279	ENSONIG00000019715	xrcc6	100	83.279	Oreochromis_niloticus
ENSGAFG00000008130	xrcc6	67	58.313	ENSOANG00000011328	XRCC6	99	58.313	Ornithorhynchus_anatinus
ENSGAFG00000008130	xrcc6	99	55.757	ENSOCUG00000006948	XRCC6	99	55.921	Oryctolagus_cuniculus
ENSGAFG00000008130	xrcc6	100	81.506	ENSORLG00020007820	xrcc6	100	81.178	Oryzias_latipes_hni
ENSGAFG00000008130	xrcc6	100	81.178	ENSORLG00015006406	xrcc6	100	80.851	Oryzias_latipes_hsok
ENSGAFG00000008130	xrcc6	100	81.178	ENSOMEG00000008998	xrcc6	100	81.178	Oryzias_melastigma
ENSGAFG00000008130	xrcc6	99	54.992	ENSOGAG00000008821	XRCC6	99	54.992	Otolemur_garnettii
ENSGAFG00000008130	xrcc6	99	48.826	ENSPPAG00000037167	XRCC6	99	50.839	Pan_paniscus
ENSGAFG00000008130	xrcc6	99	55.065	ENSPTRG00000022548	XRCC6	99	56.068	Pan_troglodytes
ENSGAFG00000008130	xrcc6	99	55.065	ENSPTRG00000045824	XRCC6	99	56.068	Pan_troglodytes
ENSGAFG00000008130	xrcc6	99	55.392	ENSPANG00000001252	XRCC6	99	58.621	Papio_anubis
ENSGAFG00000008130	xrcc6	99	69.737	ENSPKIG00000003974	xrcc6	99	69.737	Paramormyrops_kingsleyae
ENSGAFG00000008130	xrcc6	99	78.333	ENSPMGG00000014220	xrcc6	100	78.333	Periophthalmus_magnuspinnatus
ENSGAFG00000008130	xrcc6	99	54.860	ENSPEMG00000023446	Xrcc6	99	54.860	Peromyscus_maniculatus_bairdii
ENSGAFG00000008130	xrcc6	99	55.810	ENSPCIG00000026409	XRCC6	99	55.810	Phascolarctos_cinereus
ENSGAFG00000008130	xrcc6	100	94.262	ENSPFOG00000017173	xrcc6	100	94.262	Poecilia_formosa
ENSGAFG00000008130	xrcc6	100	93.934	ENSPLAG00000000562	xrcc6	100	93.934	Poecilia_latipinna
ENSGAFG00000008130	xrcc6	100	93.770	ENSPMEG00000018478	xrcc6	100	93.770	Poecilia_mexicana
ENSGAFG00000008130	xrcc6	100	93.301	ENSPREG00000020957	xrcc6	93	93.301	Poecilia_reticulata
ENSGAFG00000008130	xrcc6	99	48.856	ENSPPYG00000011876	XRCC6	99	48.856	Pongo_abelii
ENSGAFG00000008130	xrcc6	99	54.918	ENSPVAG00000001168	XRCC6	99	54.918	Pteropus_vampyrus
ENSGAFG00000008130	xrcc6	100	83.607	ENSPNYG00000003815	xrcc6	100	79.563	Pundamilia_nyererei
ENSGAFG00000008130	xrcc6	99	55.738	ENSRNOG00000006392	Xrcc6	99	56.230	Rattus_norvegicus
ENSGAFG00000008130	xrcc6	99	50.817	ENSRBIG00000039794	XRCC6	99	52.137	Rhinopithecus_bieti
ENSGAFG00000008130	xrcc6	99	55.229	ENSRROG00000030297	XRCC6	99	55.229	Rhinopithecus_roxellana
ENSGAFG00000008130	xrcc6	66	48.900	ENSSBOG00000024724	-	99	48.900	Saimiri_boliviensis_boliviensis
ENSGAFG00000008130	xrcc6	99	55.392	ENSSHAG00000010790	XRCC6	99	55.392	Sarcophilus_harrisii
ENSGAFG00000008130	xrcc6	99	72.250	ENSSFOG00015014409	xrcc6	99	72.697	Scleropages_formosus
ENSGAFG00000008130	xrcc6	100	83.115	ENSSMAG00000006496	xrcc6	100	83.115	Scophthalmus_maximus
ENSGAFG00000008130	xrcc6	100	83.279	ENSSDUG00000007542	xrcc6	100	83.279	Seriola_dumerili
ENSGAFG00000008130	xrcc6	100	82.623	ENSSLDG00000009974	xrcc6	100	82.623	Seriola_lalandi_dorsalis
ENSGAFG00000008130	xrcc6	99	57.680	ENSSPUG00000012086	XRCC6	99	57.843	Sphenodon_punctatus
ENSGAFG00000008130	xrcc6	100	84.590	ENSSPAG00000015199	xrcc6	100	84.590	Stegastes_partitus
ENSGAFG00000008130	xrcc6	95	59.760	ENSTGUG00000009852	-	95	59.760	Taeniopygia_guttata
ENSGAFG00000008130	xrcc6	99	76.480	ENSTRUG00000017070	xrcc6	99	76.480	Takifugu_rubripes
ENSGAFG00000008130	xrcc6	96	75.804	ENSTNIG00000012947	xrcc6	99	75.804	Tetraodon_nigroviridis
ENSGAFG00000008130	xrcc6	96	51.884	ENSTBEG00000011736	XRCC6	99	51.884	Tupaia_belangeri
ENSGAFG00000008130	xrcc6	99	45.990	ENSTTRG00000006749	XRCC6	99	46.481	Tursiops_truncatus
ENSGAFG00000008130	xrcc6	100	94.262	ENSXMAG00000009691	xrcc6	100	94.262	Xiphophorus_maculatus