EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000008183 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: si:dkey-34d22.5
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4489 bases
Position: chrNHOQ01001935.1:1762613-1767101
Accession: ZDB-GENE-131121-578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012086	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012211	-	2077	-	ENSGAFP00000012086	222 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000008183	si:dkey-34d22.5	71	32.484	ENSGAFG00000020906	rheb	84	32.484
ENSGAFG00000008183	si:dkey-34d22.5	74	42.012	ENSGAFG00000018916	-	73	42.012
ENSGAFG00000008183	si:dkey-34d22.5	75	42.515	ENSGAFG00000002790	rab18a	80	42.515
ENSGAFG00000008183	si:dkey-34d22.5	68	33.775	ENSGAFG00000010541	rras	81	33.537
ENSGAFG00000008183	si:dkey-34d22.5	68	41.176	ENSGAFG00000015249	-	63	41.176
ENSGAFG00000008183	si:dkey-34d22.5	83	34.595	ENSGAFG00000007102	rab11bb	77	36.257
ENSGAFG00000008183	si:dkey-34d22.5	75	31.138	ENSGAFG00000010126	rasd4	78	31.138
ENSGAFG00000008183	si:dkey-34d22.5	76	30.233	ENSGAFG00000000629	RAB29	82	30.233
ENSGAFG00000008183	si:dkey-34d22.5	97	34.404	ENSGAFG00000016549	rab11a	95	34.404
ENSGAFG00000008183	si:dkey-34d22.5	78	40.000	ENSGAFG00000014787	-	92	40.000
ENSGAFG00000008183	si:dkey-34d22.5	71	37.267	ENSGAFG00000020102	si:dkey-13a21.4	77	37.267
ENSGAFG00000008183	si:dkey-34d22.5	75	34.104	ENSGAFG00000014541	rras2	81	34.104
ENSGAFG00000008183	si:dkey-34d22.5	75	36.145	ENSGAFG00000003642	-	73	36.145
ENSGAFG00000008183	si:dkey-34d22.5	78	41.618	ENSGAFG00000015702	zgc:171927	68	41.618
ENSGAFG00000008183	si:dkey-34d22.5	76	43.452	ENSGAFG00000017305	RAB15	87	44.030
ENSGAFG00000008183	si:dkey-34d22.5	71	38.217	ENSGAFG00000007684	rab23	74	37.821
ENSGAFG00000008183	si:dkey-34d22.5	78	32.184	ENSGAFG00000015135	rab36	67	32.184
ENSGAFG00000008183	si:dkey-34d22.5	75	36.747	ENSGAFG00000000884	rab5c	90	32.710
ENSGAFG00000008183	si:dkey-34d22.5	76	41.420	ENSGAFG00000001289	rab1ab	81	41.420
ENSGAFG00000008183	si:dkey-34d22.5	98	50.459	ENSGAFG00000006932	-	98	50.459
ENSGAFG00000008183	si:dkey-34d22.5	77	40.936	ENSGAFG00000019872	rab41	77	40.936
ENSGAFG00000008183	si:dkey-34d22.5	67	38.667	ENSGAFG00000021202	zgc:101559	63	38.667
ENSGAFG00000008183	si:dkey-34d22.5	74	33.939	ENSGAFG00000021738	rhebl1	88	33.939
ENSGAFG00000008183	si:dkey-34d22.5	77	42.442	ENSGAFG00000005388	si:dkey-16l2.16	80	42.442
ENSGAFG00000008183	si:dkey-34d22.5	91	33.816	ENSGAFG00000021688	-	94	33.816
ENSGAFG00000008183	si:dkey-34d22.5	85	36.598	ENSGAFG00000015490	rab33a	69	36.598
ENSGAFG00000008183	si:dkey-34d22.5	90	37.255	ENSGAFG00000017270	rab6ba	94	37.255
ENSGAFG00000008183	si:dkey-34d22.5	70	33.758	ENSGAFG00000021765	kras	98	30.688
ENSGAFG00000008183	si:dkey-34d22.5	79	39.205	ENSGAFG00000019305	rab1ba	86	39.205
ENSGAFG00000008183	si:dkey-34d22.5	87	38.384	ENSGAFG00000020309	rab30	86	41.317
ENSGAFG00000008183	si:dkey-34d22.5	75	44.311	ENSGAFG00000008560	rab18b	80	44.311
ENSGAFG00000008183	si:dkey-34d22.5	79	40.341	ENSGAFG00000000918	-	85	40.341
ENSGAFG00000008183	si:dkey-34d22.5	74	46.061	ENSGAFG00000002756	rab15	76	46.061
ENSGAFG00000008183	si:dkey-34d22.5	74	41.420	ENSGAFG00000000591	rab9a	76	41.420
ENSGAFG00000008183	si:dkey-34d22.5	85	38.830	ENSGAFG00000005477	rab4a	86	38.830
ENSGAFG00000008183	si:dkey-34d22.5	97	32.883	ENSGAFG00000005679	rab11ba	95	32.883
ENSGAFG00000008183	si:dkey-34d22.5	77	40.351	ENSGAFG00000010916	rab6bb	78	40.351
ENSGAFG00000008183	si:dkey-34d22.5	75	34.940	ENSGAFG00000001301	rab22a	84	34.940
ENSGAFG00000008183	si:dkey-34d22.5	92	33.971	ENSGAFG00000020476	RAB7A	95	33.971
ENSGAFG00000008183	si:dkey-34d22.5	87	38.342	ENSGAFG00000006846	rab2a	89	38.342
ENSGAFG00000008183	si:dkey-34d22.5	80	37.766	ENSGAFG00000004099	rab9b	82	37.766
ENSGAFG00000008183	si:dkey-34d22.5	77	39.766	ENSGAFG00000006356	rab6a	78	39.766
ENSGAFG00000008183	si:dkey-34d22.5	73	44.172	ENSGAFG00000014730	-	79	44.172
ENSGAFG00000008183	si:dkey-34d22.5	82	34.426	ENSGAFG00000011713	rab25a	84	39.437
ENSGAFG00000008183	si:dkey-34d22.5	80	35.393	ENSGAFG00000021724	rab25b	84	35.393
ENSGAFG00000008183	si:dkey-34d22.5	98	51.376	ENSGAFG00000004604	RAB39B	98	51.376
ENSGAFG00000008183	si:dkey-34d22.5	70	38.462	ENSGAFG00000019659	rab33ba	63	38.462
ENSGAFG00000008183	si:dkey-34d22.5	75	36.145	ENSGAFG00000011619	rab5aa	75	36.145
ENSGAFG00000008183	si:dkey-34d22.5	78	33.908	ENSGAFG00000012579	rab34a	65	33.908
ENSGAFG00000008183	si:dkey-34d22.5	74	34.940	ENSGAFG00000005188	rabl2	70	34.940
ENSGAFG00000008183	si:dkey-34d22.5	70	30.769	ENSGAFG00000018295	si:ch73-116o1.2	79	30.952
ENSGAFG00000008183	si:dkey-34d22.5	86	59.474	ENSGAFG00000002141	rab42a	86	59.474
ENSGAFG00000008183	si:dkey-34d22.5	97	33.945	ENSGAFG00000021725	rab11al	95	33.945
ENSGAFG00000008183	si:dkey-34d22.5	78	32.759	ENSGAFG00000021814	hrasb	88	32.749

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008183	si:dkey-34d22.5	100	86.937	ENSACIG00000016958	si:dkey-34d22.5	100	86.937	Amphilophus_citrinellus
ENSGAFG00000008183	si:dkey-34d22.5	100	85.135	ENSATEG00000010784	si:dkey-34d22.5	86	85.135	Anabas_testudineus
ENSGAFG00000008183	si:dkey-34d22.5	89	62.437	ENSCPBG00000011236	-	90	62.437	Chrysemys_picta_bellii
ENSGAFG00000008183	si:dkey-34d22.5	100	73.874	ENSCSEG00000019183	si:dkey-34d22.5	100	73.874	Cynoglossus_semilaevis
ENSGAFG00000008183	si:dkey-34d22.5	100	92.793	ENSCVAG00000017064	si:dkey-34d22.5	100	92.793	Cyprinodon_variegatus
ENSGAFG00000008183	si:dkey-34d22.5	83	49.730	ENSDARG00000100379	si:dkey-34d22.2	99	49.730	Danio_rerio
ENSGAFG00000008183	si:dkey-34d22.5	97	57.870	ENSFALG00000001373	-	97	57.870	Ficedula_albicollis
ENSGAFG00000008183	si:dkey-34d22.5	100	92.825	ENSFHEG00000012041	si:dkey-34d22.5	100	92.825	Fundulus_heteroclitus
ENSGAFG00000008183	si:dkey-34d22.5	86	60.938	ENSGALG00000000994	-	90	60.938	Gallus_gallus
ENSGAFG00000008183	si:dkey-34d22.5	94	57.212	ENSGAGG00000004918	-	100	57.212	Gopherus_agassizii
ENSGAFG00000008183	si:dkey-34d22.5	99	73.303	ENSHCOG00000015692	si:dkey-34d22.5	99	73.303	Hippocampus_comes
ENSGAFG00000008183	si:dkey-34d22.5	100	86.937	ENSKMAG00000012778	si:dkey-34d22.5	100	86.937	Kryptolebias_marmoratus
ENSGAFG00000008183	si:dkey-34d22.5	99	81.448	ENSLBEG00000002926	si:dkey-34d22.5	100	81.448	Labrus_bergylta
ENSGAFG00000008183	si:dkey-34d22.5	98	58.716	ENSLACG00000012674	si:dkey-34d22.5	99	58.716	Latimeria_chalumnae
ENSGAFG00000008183	si:dkey-34d22.5	98	67.281	ENSLOCG00000003467	si:dkey-34d22.5	98	70.046	Lepisosteus_oculatus
ENSGAFG00000008183	si:dkey-34d22.5	100	80.631	ENSMMOG00000006846	si:dkey-34d22.5	100	80.631	Mola_mola
ENSGAFG00000008183	si:dkey-34d22.5	100	81.081	ENSMALG00000013152	si:dkey-34d22.5	100	81.081	Monopterus_albus
ENSGAFG00000008183	si:dkey-34d22.5	99	85.520	ENSORLG00000014099	si:dkey-34d22.5	99	85.520	Oryzias_latipes
ENSGAFG00000008183	si:dkey-34d22.5	99	85.068	ENSORLG00020020277	si:dkey-34d22.5	99	85.068	Oryzias_latipes_hni
ENSGAFG00000008183	si:dkey-34d22.5	99	85.068	ENSORLG00015000142	si:dkey-34d22.5	99	85.068	Oryzias_latipes_hsok
ENSGAFG00000008183	si:dkey-34d22.5	91	90.594	ENSOMEG00000017958	si:dkey-34d22.5	99	87.330	Oryzias_melastigma
ENSGAFG00000008183	si:dkey-34d22.5	97	72.685	ENSPKIG00000021209	si:dkey-34d22.5	99	72.685	Paramormyrops_kingsleyae
ENSGAFG00000008183	si:dkey-34d22.5	91	60.697	ENSPSIG00000006606	-	99	60.697	Pelodiscus_sinensis
ENSGAFG00000008183	si:dkey-34d22.5	99	82.353	ENSPMGG00000001298	-	99	82.353	Periophthalmus_magnuspinnatus
ENSGAFG00000008183	si:dkey-34d22.5	89	60.406	ENSPCIG00000022399	-	88	60.406	Phascolarctos_cinereus
ENSGAFG00000008183	si:dkey-34d22.5	100	97.748	ENSPFOG00000014499	si:dkey-34d22.5	100	97.748	Poecilia_formosa
ENSGAFG00000008183	si:dkey-34d22.5	100	97.748	ENSPLAG00000007773	si:dkey-34d22.5	100	97.748	Poecilia_latipinna
ENSGAFG00000008183	si:dkey-34d22.5	100	97.748	ENSPMEG00000012932	si:dkey-34d22.5	100	97.748	Poecilia_mexicana
ENSGAFG00000008183	si:dkey-34d22.5	89	59.391	ENSSHAG00000008520	-	88	59.391	Sarcophilus_harrisii
ENSGAFG00000008183	si:dkey-34d22.5	97	68.837	ENSSFOG00015012088	rab42	96	68.837	Scleropages_formosus
ENSGAFG00000008183	si:dkey-34d22.5	100	87.387	ENSSLDG00000002646	si:dkey-34d22.5	100	87.387	Seriola_lalandi_dorsalis
ENSGAFG00000008183	si:dkey-34d22.5	99	87.330	ENSSPAG00000012955	si:dkey-34d22.5	99	87.330	Stegastes_partitus
ENSGAFG00000008183	si:dkey-34d22.5	93	49.029	ENSXETG00000020622	rab39a	98	49.029	Xenopus_tropicalis
ENSGAFG00000008183	si:dkey-34d22.5	100	98.198	ENSXCOG00000008410	si:dkey-34d22.5	100	98.198	Xiphophorus_couchianus
ENSGAFG00000008183	si:dkey-34d22.5	100	98.198	ENSXMAG00000029317	si:dkey-34d22.5	100	98.198	Xiphophorus_maculatus