EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000008238 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-19e4.5
Alias: fb82g02|wu:fb82g02
Full Name: si:dkey-19e4.5
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4041 bases
Position: chrNHOQ01002390.1:1827657-1831697
Accession: ZDB-GENE-030131-1852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012197	PTH2	PF01981.16	3.8e-35	1	1
ENSGAFP00000012191	PTH2	PF01981.16	2.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012318	-	1742	-	ENSGAFP00000012191	204 (aa)	-	-
ENSGAFT00000012324	-	1541	-	ENSGAFP00000012197	194 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000008238	si:dkey-19e4.5	63	44.715	ENSGAFG00000015503	ptrh2	66	44.715

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008238	si:dkey-19e4.5	95	89.674	ENSAPOG00000018297	si:dkey-19e4.5	100	89.674	Acanthochromis_polyacanthus
ENSGAFG00000008238	si:dkey-19e4.5	90	91.429	ENSACIG00000001450	si:dkey-19e4.5	99	91.429	Amphilophus_citrinellus
ENSGAFG00000008238	si:dkey-19e4.5	95	89.674	ENSAOCG00000000622	si:dkey-19e4.5	99	92.486	Amphiprion_ocellaris
ENSGAFG00000008238	si:dkey-19e4.5	95	89.674	ENSAPEG00000017071	si:dkey-19e4.5	99	92.486	Amphiprion_percula
ENSGAFG00000008238	si:dkey-19e4.5	95	84.239	ENSATEG00000003450	si:dkey-19e4.5	100	84.239	Anabas_testudineus
ENSGAFG00000008238	si:dkey-19e4.5	59	74.561	ENSACAG00000028513	-	99	74.561	Anolis_carolinensis
ENSGAFG00000008238	si:dkey-19e4.5	95	88.587	ENSACLG00000026360	si:dkey-19e4.5	100	88.587	Astatotilapia_calliptera
ENSGAFG00000008238	si:dkey-19e4.5	95	84.783	ENSAMXG00000016302	si:dkey-19e4.5	100	84.783	Astyanax_mexicanus
ENSGAFG00000008238	si:dkey-19e4.5	88	39.474	WBGene00016062	C24G6.8	60	39.791	Caenorhabditis_elegans
ENSGAFG00000008238	si:dkey-19e4.5	95	92.935	ENSCVAG00000018623	si:dkey-19e4.5	100	92.935	Cyprinodon_variegatus
ENSGAFG00000008238	si:dkey-19e4.5	88	90.058	ENSDARG00000089886	si:dkey-19e4.5	98	90.058	Danio_rerio
ENSGAFG00000008238	si:dkey-19e4.5	95	85.561	ENSELUG00000012877	si:dkey-19e4.5	100	85.561	Esox_lucius
ENSGAFG00000008238	si:dkey-19e4.5	95	91.848	ENSFHEG00000017879	si:dkey-19e4.5	98	94.737	Fundulus_heteroclitus
ENSGAFG00000008238	si:dkey-19e4.5	69	90.299	ENSGMOG00000018615	si:dkey-19e4.5	100	90.299	Gadus_morhua
ENSGAFG00000008238	si:dkey-19e4.5	69	90.299	ENSGACG00000011371	si:dkey-19e4.5	100	90.299	Gasterosteus_aculeatus
ENSGAFG00000008238	si:dkey-19e4.5	95	88.587	ENSHBUG00000003898	si:dkey-19e4.5	100	88.587	Haplochromis_burtoni
ENSGAFG00000008238	si:dkey-19e4.5	95	82.162	ENSHCOG00000011175	si:dkey-19e4.5	100	82.162	Hippocampus_comes
ENSGAFG00000008238	si:dkey-19e4.5	95	84.239	ENSIPUG00000023250	si:dkey-19e4.5	100	84.239	Ictalurus_punctatus
ENSGAFG00000008238	si:dkey-19e4.5	95	84.783	ENSKMAG00000018142	si:dkey-19e4.5	100	84.783	Kryptolebias_marmoratus
ENSGAFG00000008238	si:dkey-19e4.5	95	89.130	ENSLBEG00000028494	si:dkey-19e4.5	98	91.228	Labrus_bergylta
ENSGAFG00000008238	si:dkey-19e4.5	96	65.775	ENSLACG00000003702	si:dkey-19e4.5	99	66.120	Latimeria_chalumnae
ENSGAFG00000008238	si:dkey-19e4.5	95	87.500	ENSLOCG00000013652	si:dkey-19e4.5	100	87.500	Lepisosteus_oculatus
ENSGAFG00000008238	si:dkey-19e4.5	95	86.957	ENSMAMG00000023661	si:dkey-19e4.5	99	89.714	Mastacembelus_armatus
ENSGAFG00000008238	si:dkey-19e4.5	95	88.587	ENSMZEG00005006058	si:dkey-19e4.5	99	90.230	Maylandia_zebra
ENSGAFG00000008238	si:dkey-19e4.5	95	86.413	ENSMMOG00000009678	si:dkey-19e4.5	100	86.413	Mola_mola
ENSGAFG00000008238	si:dkey-19e4.5	89	87.861	ENSMALG00000021083	si:dkey-19e4.5	99	87.861	Monopterus_albus
ENSGAFG00000008238	si:dkey-19e4.5	82	63.584	ENSNBRG00000018523	si:dkey-19e4.5	82	63.584	Neolamprologus_brichardi
ENSGAFG00000008238	si:dkey-19e4.5	95	83.696	ENSORLG00000010093	si:dkey-19e4.5	100	83.696	Oryzias_latipes
ENSGAFG00000008238	si:dkey-19e4.5	95	83.696	ENSORLG00020005940	si:dkey-19e4.5	100	83.696	Oryzias_latipes_hni
ENSGAFG00000008238	si:dkey-19e4.5	95	83.696	ENSORLG00015002105	si:dkey-19e4.5	100	83.696	Oryzias_latipes_hsok
ENSGAFG00000008238	si:dkey-19e4.5	95	83.696	ENSOMEG00000001615	si:dkey-19e4.5	98	87.135	Oryzias_melastigma
ENSGAFG00000008238	si:dkey-19e4.5	95	85.326	ENSPKIG00000018613	-	100	85.326	Paramormyrops_kingsleyae
ENSGAFG00000008238	si:dkey-19e4.5	95	77.174	ENSPKIG00000016249	-	100	77.174	Paramormyrops_kingsleyae
ENSGAFG00000008238	si:dkey-19e4.5	95	97.297	ENSPFOG00000011934	si:dkey-19e4.5	100	97.297	Poecilia_formosa
ENSGAFG00000008238	si:dkey-19e4.5	95	97.283	ENSPLAG00000012878	si:dkey-19e4.5	100	97.283	Poecilia_latipinna
ENSGAFG00000008238	si:dkey-19e4.5	95	97.297	ENSPMEG00000015916	si:dkey-19e4.5	100	97.297	Poecilia_mexicana
ENSGAFG00000008238	si:dkey-19e4.5	95	97.283	ENSPREG00000021009	si:dkey-19e4.5	100	97.283	Poecilia_reticulata
ENSGAFG00000008238	si:dkey-19e4.5	95	88.587	ENSPNYG00000007117	si:dkey-19e4.5	100	88.587	Pundamilia_nyererei
ENSGAFG00000008238	si:dkey-19e4.5	95	85.326	ENSPNAG00000009107	si:dkey-19e4.5	99	88.068	Pygocentrus_nattereri
ENSGAFG00000008238	si:dkey-19e4.5	95	86.413	ENSSFOG00015018940	-	85	86.413	Scleropages_formosus
ENSGAFG00000008238	si:dkey-19e4.5	95	80.435	ENSSFOG00015015536	-	100	80.435	Scleropages_formosus
ENSGAFG00000008238	si:dkey-19e4.5	95	89.674	ENSSMAG00000004082	si:dkey-19e4.5	100	89.674	Scophthalmus_maximus
ENSGAFG00000008238	si:dkey-19e4.5	95	89.130	ENSSDUG00000008513	si:dkey-19e4.5	100	89.130	Seriola_dumerili
ENSGAFG00000008238	si:dkey-19e4.5	89	78.488	ENSSLDG00000017403	si:dkey-19e4.5	97	78.488	Seriola_lalandi_dorsalis
ENSGAFG00000008238	si:dkey-19e4.5	65	72.441	ENSSPUG00000009492	-	81	72.441	Sphenodon_punctatus
ENSGAFG00000008238	si:dkey-19e4.5	95	90.217	ENSSPAG00000008798	si:dkey-19e4.5	98	92.486	Stegastes_partitus
ENSGAFG00000008238	si:dkey-19e4.5	95	85.870	ENSTRUG00000020025	si:dkey-19e4.5	100	85.870	Takifugu_rubripes
ENSGAFG00000008238	si:dkey-19e4.5	95	98.913	ENSXCOG00000002547	si:dkey-19e4.5	100	98.913	Xiphophorus_couchianus
ENSGAFG00000008238	si:dkey-19e4.5	95	98.913	ENSXMAG00000025389	si:dkey-19e4.5	100	98.913	Xiphophorus_maculatus