EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008396 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5862 bases
Position: chrNHOQ01001935.1:2088334-2094195
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012420	Sua5_yciO_yrdC	PF01300.18	6.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012549	-	2785	-	ENSGAFP00000012420	267 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008396	yrdc	84	56.140	ENSG00000196449	YRDC	82	55.844	Homo_sapiens
ENSGAFG00000008396	yrdc	100	77.903	ENSAPOG00000024293	yrdc	100	77.903	Acanthochromis_polyacanthus
ENSGAFG00000008396	yrdc	67	60.656	ENSAMEG00000001173	YRDC	97	60.656	Ailuropoda_melanoleuca
ENSGAFG00000008396	yrdc	98	80.460	ENSACIG00000017330	yrdc	98	80.460	Amphilophus_citrinellus
ENSGAFG00000008396	yrdc	100	77.903	ENSAOCG00000021647	yrdc	100	77.903	Amphiprion_ocellaris
ENSGAFG00000008396	yrdc	100	77.528	ENSAPEG00000006164	yrdc	100	77.528	Amphiprion_percula
ENSGAFG00000008396	yrdc	99	74.812	ENSATEG00000010086	yrdc	100	74.812	Anabas_testudineus
ENSGAFG00000008396	yrdc	71	60.825	ENSACAG00000017203	YRDC	93	60.914	Anolis_carolinensis
ENSGAFG00000008396	yrdc	74	58.911	ENSANAG00000028788	-	86	58.911	Aotus_nancymaae
ENSGAFG00000008396	yrdc	85	52.361	ENSANAG00000031052	-	84	52.361	Aotus_nancymaae
ENSGAFG00000008396	yrdc	100	77.239	ENSACLG00000027775	yrdc	100	77.239	Astatotilapia_calliptera
ENSGAFG00000008396	yrdc	88	70.085	ENSAMXG00000037791	yrdc	89	70.085	Astyanax_mexicanus
ENSGAFG00000008396	yrdc	95	54.264	ENSBTAG00000006510	YRDC	92	54.264	Bos_taurus
ENSGAFG00000008396	yrdc	76	34.975	WBGene00012997	Y48C3A.18	98	33.613	Caenorhabditis_elegans
ENSGAFG00000008396	yrdc	85	55.844	ENSCJAG00000002078	YRDC	63	55.844	Callithrix_jacchus
ENSGAFG00000008396	yrdc	92	53.815	ENSCAFG00000003253	YRDC	92	53.488	Canis_familiaris
ENSGAFG00000008396	yrdc	92	54.217	ENSCAFG00020007843	YRDC	92	53.876	Canis_lupus_dingo
ENSGAFG00000008396	yrdc	95	52.713	ENSCHIG00000007882	YRDC	92	52.713	Capra_hircus
ENSGAFG00000008396	yrdc	62	60.000	ENSTSYG00000005555	YRDC	61	60.000	Carlito_syrichta
ENSGAFG00000008396	yrdc	85	58.009	ENSCPOG00000036144	YRDC	82	58.009	Cavia_porcellus
ENSGAFG00000008396	yrdc	85	55.844	ENSCCAG00000028891	YRDC	82	55.844	Cebus_capucinus
ENSGAFG00000008396	yrdc	84	53.947	ENSCATG00000036928	YRDC	82	54.978	Cercocebus_atys
ENSGAFG00000008396	yrdc	84	56.579	ENSCLAG00000015012	YRDC	92	53.257	Chinchilla_lanigera
ENSGAFG00000008396	yrdc	84	53.947	ENSCSAG00000001116	YRDC	82	54.978	Chlorocebus_sabaeus
ENSGAFG00000008396	yrdc	63	55.689	ENSCHOG00000005500	YRDC	79	55.689	Choloepus_hoffmanni
ENSGAFG00000008396	yrdc	77	63.810	ENSCPBG00000018446	YRDC	90	63.810	Chrysemys_picta_bellii
ENSGAFG00000008396	yrdc	75	49.296	ENSCING00000007564	-	98	49.296	Ciona_intestinalis
ENSGAFG00000008396	yrdc	75	47.867	ENSCSAVG00000009982	-	98	47.867	Ciona_savignyi
ENSGAFG00000008396	yrdc	84	54.386	ENSCANG00000031111	YRDC	82	55.411	Colobus_angolensis_palliatus
ENSGAFG00000008396	yrdc	84	56.140	ENSCGRG00001014496	-	82	55.844	Cricetulus_griseus_chok1gshd
ENSGAFG00000008396	yrdc	84	50.877	ENSCGRG00001000829	-	63	50.649	Cricetulus_griseus_chok1gshd
ENSGAFG00000008396	yrdc	93	69.112	ENSCSEG00000019075	yrdc	95	69.112	Cynoglossus_semilaevis
ENSGAFG00000008396	yrdc	100	83.146	ENSCVAG00000017355	yrdc	100	83.146	Cyprinodon_variegatus
ENSGAFG00000008396	yrdc	88	69.231	ENSDARG00000041428	yrdc	98	69.231	Danio_rerio
ENSGAFG00000008396	yrdc	70	43.299	ENSDNOG00000036198	-	94	43.299	Dasypus_novemcinctus
ENSGAFG00000008396	yrdc	84	54.386	ENSDNOG00000038789	-	95	50.612	Dasypus_novemcinctus
ENSGAFG00000008396	yrdc	69	61.905	ENSDORG00000008788	Yrdc	84	61.905	Dipodomys_ordii
ENSGAFG00000008396	yrdc	85	44.068	FBgn0061361	CG33786	95	44.068	Drosophila_melanogaster
ENSGAFG00000008396	yrdc	95	42.146	ENSETEG00000003442	YRDC	93	42.146	Echinops_telfairi
ENSGAFG00000008396	yrdc	88	47.234	ENSEBUG00000014080	yrdc	99	47.234	Eptatretus_burgeri
ENSGAFG00000008396	yrdc	77	59.809	ENSEASG00005012253	YRDC	93	53.640	Equus_asinus_asinus
ENSGAFG00000008396	yrdc	95	54.023	ENSECAG00000022522	YRDC	93	54.023	Equus_caballus
ENSGAFG00000008396	yrdc	100	65.683	ENSELUG00000018071	yrdc	89	65.683	Esox_lucius
ENSGAFG00000008396	yrdc	84	55.702	ENSFCAG00000011018	YRDC	93	52.490	Felis_catus
ENSGAFG00000008396	yrdc	71	64.249	ENSFALG00000000964	YRDC	90	63.452	Ficedula_albicollis
ENSGAFG00000008396	yrdc	100	85.019	ENSFHEG00000001029	yrdc	99	85.306	Fundulus_heteroclitus
ENSGAFG00000008396	yrdc	76	77.833	ENSGMOG00000015635	yrdc	99	77.833	Gadus_morhua
ENSGAFG00000008396	yrdc	78	60.849	ENSGALG00000029001	YRDC	83	60.849	Gallus_gallus
ENSGAFG00000008396	yrdc	66	30.000	ENSGALG00000025899	-	63	30.000	Gallus_gallus
ENSGAFG00000008396	yrdc	87	76.793	ENSGACG00000013878	yrdc	98	76.793	Gasterosteus_aculeatus
ENSGAFG00000008396	yrdc	82	60.268	ENSGAGG00000014968	YRDC	97	60.268	Gopherus_agassizii
ENSGAFG00000008396	yrdc	84	56.140	ENSGGOG00000007619	YRDC	82	55.844	Gorilla_gorilla
ENSGAFG00000008396	yrdc	100	76.866	ENSHBUG00000009298	yrdc	100	76.866	Haplochromis_burtoni
ENSGAFG00000008396	yrdc	95	54.023	ENSHGLG00000014075	YRDC	92	54.023	Heterocephalus_glaber_female
ENSGAFG00000008396	yrdc	74	60.396	ENSHGLG00100002734	YRDC	73	60.396	Heterocephalus_glaber_male
ENSGAFG00000008396	yrdc	98	65.900	ENSHCOG00000006598	yrdc	98	65.900	Hippocampus_comes
ENSGAFG00000008396	yrdc	88	69.787	ENSIPUG00000014985	yrdc	97	69.787	Ictalurus_punctatus
ENSGAFG00000008396	yrdc	95	53.257	ENSSTOG00000001643	YRDC	93	53.257	Ictidomys_tridecemlineatus
ENSGAFG00000008396	yrdc	95	82.609	ENSKMAG00000013468	yrdc	95	82.609	Kryptolebias_marmoratus
ENSGAFG00000008396	yrdc	99	79.323	ENSLBEG00000027501	yrdc	99	79.323	Labrus_bergylta
ENSGAFG00000008396	yrdc	67	31.937	ENSLACG00000017624	si:ch211-153b23.3	58	31.937	Latimeria_chalumnae
ENSGAFG00000008396	yrdc	98	54.348	ENSLACG00000010689	YRDC	94	64.216	Latimeria_chalumnae
ENSGAFG00000008396	yrdc	87	66.102	ENSLOCG00000003321	yrdc	97	66.102	Lepisosteus_oculatus
ENSGAFG00000008396	yrdc	95	52.490	ENSLAFG00000017556	YRDC	93	52.490	Loxodonta_africana
ENSGAFG00000008396	yrdc	75	56.863	ENSMFAG00000003487	YRDC	96	58.333	Macaca_fascicularis
ENSGAFG00000008396	yrdc	84	53.947	ENSMMUG00000005372	YRDC	61	54.978	Macaca_mulatta
ENSGAFG00000008396	yrdc	84	53.947	ENSMNEG00000029348	YRDC	82	54.978	Macaca_nemestrina
ENSGAFG00000008396	yrdc	52	60.140	ENSMLEG00000041122	YRDC	95	62.238	Mandrillus_leucophaeus
ENSGAFG00000008396	yrdc	99	76.208	ENSMAMG00000007315	yrdc	100	76.208	Mastacembelus_armatus
ENSGAFG00000008396	yrdc	100	77.239	ENSMZEG00005006948	yrdc	100	77.239	Maylandia_zebra
ENSGAFG00000008396	yrdc	75	62.562	ENSMGAG00000002833	YRDC	99	62.562	Meleagris_gallopavo
ENSGAFG00000008396	yrdc	84	56.579	ENSMICG00000031688	YRDC	82	56.277	Microcebus_murinus
ENSGAFG00000008396	yrdc	86	43.162	ENSMOCG00000000164	-	83	43.038	Microtus_ochrogaster
ENSGAFG00000008396	yrdc	100	75.281	ENSMMOG00000002119	yrdc	100	75.281	Mola_mola
ENSGAFG00000008396	yrdc	76	60.870	ENSMODG00000017750	YRDC	74	60.870	Monodelphis_domestica
ENSGAFG00000008396	yrdc	97	76.154	ENSMALG00000012471	yrdc	98	76.154	Monopterus_albus
ENSGAFG00000008396	yrdc	79	56.279	MGP_CAROLIEiJ_G0026453	Yrdc	98	64.078	Mus_caroli
ENSGAFG00000008396	yrdc	85	55.844	ENSMUSG00000028889	Yrdc	100	64.762	Mus_musculus
ENSGAFG00000008396	yrdc	85	56.710	MGP_PahariEiJ_G0028784	Yrdc	100	64.762	Mus_pahari
ENSGAFG00000008396	yrdc	85	55.844	MGP_SPRETEiJ_G0027432	Yrdc	82	55.844	Mus_spretus
ENSGAFG00000008396	yrdc	74	58.911	ENSMPUG00000014542	YRDC	81	58.911	Mustela_putorius_furo
ENSGAFG00000008396	yrdc	95	53.257	ENSMLUG00000000955	-	93	53.257	Myotis_lucifugus
ENSGAFG00000008396	yrdc	70	58.854	ENSMLUG00000024310	-	94	58.854	Myotis_lucifugus
ENSGAFG00000008396	yrdc	75	49.510	ENSMLUG00000028796	-	73	49.510	Myotis_lucifugus
ENSGAFG00000008396	yrdc	76	59.615	ENSNGAG00000019099	Yrdc	74	59.615	Nannospalax_galili
ENSGAFG00000008396	yrdc	99	76.981	ENSNBRG00000009475	yrdc	99	76.981	Neolamprologus_brichardi
ENSGAFG00000008396	yrdc	84	56.140	ENSNLEG00000011665	YRDC	82	55.844	Nomascus_leucogenys
ENSGAFG00000008396	yrdc	76	61.353	ENSMEUG00000005068	YRDC	96	61.353	Notamacropus_eugenii
ENSGAFG00000008396	yrdc	84	57.018	ENSODEG00000007401	YRDC	100	63.810	Octodon_degus
ENSGAFG00000008396	yrdc	89	83.193	ENSONIG00000016213	yrdc	100	83.193	Oreochromis_niloticus
ENSGAFG00000008396	yrdc	96	53.788	ENSOCUG00000005384	YRDC	89	53.788	Oryctolagus_cuniculus
ENSGAFG00000008396	yrdc	100	74.815	ENSORLG00000014393	yrdc	100	74.815	Oryzias_latipes
ENSGAFG00000008396	yrdc	100	75.000	ENSORLG00020019663	yrdc	100	75.000	Oryzias_latipes_hni
ENSGAFG00000008396	yrdc	100	74.627	ENSORLG00015004625	yrdc	100	74.627	Oryzias_latipes_hsok
ENSGAFG00000008396	yrdc	100	74.157	ENSOMEG00000018550	yrdc	100	74.157	Oryzias_melastigma
ENSGAFG00000008396	yrdc	85	55.411	ENSOGAG00000030474	YRDC	83	55.411	Otolemur_garnettii
ENSGAFG00000008396	yrdc	92	53.414	ENSOARG00000019873	YRDC	88	53.414	Ovis_aries
ENSGAFG00000008396	yrdc	51	63.830	ENSPPAG00000039722	-	95	63.830	Pan_paniscus
ENSGAFG00000008396	yrdc	84	55.702	ENSPPRG00000007752	YRDC	93	52.490	Panthera_pardus
ENSGAFG00000008396	yrdc	72	47.826	ENSPTIG00000019821	YRDC	88	47.826	Panthera_tigris_altaica
ENSGAFG00000008396	yrdc	84	56.140	ENSPTRG00000000557	YRDC	82	55.844	Pan_troglodytes
ENSGAFG00000008396	yrdc	84	53.947	ENSPANG00000006487	YRDC	62	54.978	Papio_anubis
ENSGAFG00000008396	yrdc	97	65.169	ENSPKIG00000004574	yrdc	96	65.169	Paramormyrops_kingsleyae
ENSGAFG00000008396	yrdc	75	61.951	ENSPSIG00000006483	YRDC	72	61.951	Pelodiscus_sinensis
ENSGAFG00000008396	yrdc	95	72.047	ENSPMGG00000004184	yrdc	95	74.180	Periophthalmus_magnuspinnatus
ENSGAFG00000008396	yrdc	63	59.302	ENSPEMG00000016985	Yrdc	75	59.302	Peromyscus_maniculatus_bairdii
ENSGAFG00000008396	yrdc	64	54.802	ENSPMAG00000002905	yrdc	96	54.802	Petromyzon_marinus
ENSGAFG00000008396	yrdc	90	53.629	ENSPCIG00000025731	YRDC	89	53.648	Phascolarctos_cinereus
ENSGAFG00000008396	yrdc	100	94.757	ENSPFOG00000023097	yrdc	100	94.757	Poecilia_formosa
ENSGAFG00000008396	yrdc	100	94.382	ENSPLAG00000020882	yrdc	100	94.382	Poecilia_latipinna
ENSGAFG00000008396	yrdc	99	94.717	ENSPMEG00000013237	yrdc	100	94.717	Poecilia_mexicana
ENSGAFG00000008396	yrdc	100	95.131	ENSPREG00000005285	yrdc	100	95.131	Poecilia_reticulata
ENSGAFG00000008396	yrdc	76	58.937	ENSPPYG00000001523	-	85	58.937	Pongo_abelii
ENSGAFG00000008396	yrdc	97	52.830	ENSPCAG00000016850	YRDC	94	52.830	Procavia_capensis
ENSGAFG00000008396	yrdc	84	56.579	ENSPCOG00000013214	YRDC	82	56.277	Propithecus_coquereli
ENSGAFG00000008396	yrdc	95	52.874	ENSPVAG00000010147	YRDC	93	52.874	Pteropus_vampyrus
ENSGAFG00000008396	yrdc	100	77.239	ENSPNYG00000013956	yrdc	100	77.239	Pundamilia_nyererei
ENSGAFG00000008396	yrdc	81	73.023	ENSPNAG00000015625	yrdc	89	73.023	Pygocentrus_nattereri
ENSGAFG00000008396	yrdc	84	55.947	ENSRNOG00000025424	Yrdc	82	55.411	Rattus_norvegicus
ENSGAFG00000008396	yrdc	84	55.263	ENSRBIG00000032289	YRDC	82	55.411	Rhinopithecus_bieti
ENSGAFG00000008396	yrdc	82	53.509	ENSRROG00000039370	YRDC	78	54.825	Rhinopithecus_roxellana
ENSGAFG00000008396	yrdc	72	59.898	ENSSBOG00000018937	YRDC	84	59.898	Saimiri_boliviensis_boliviensis
ENSGAFG00000008396	yrdc	52	62.500	ENSSHAG00000013957	-	97	62.500	Sarcophilus_harrisii
ENSGAFG00000008396	yrdc	77	71.635	ENSSFOG00015006128	yrdc	89	71.635	Scleropages_formosus
ENSGAFG00000008396	yrdc	89	79.412	ENSSMAG00000005195	yrdc	97	77.734	Scophthalmus_maximus
ENSGAFG00000008396	yrdc	63	30.286	ENSSDUG00000006736	-	77	32.000	Seriola_dumerili
ENSGAFG00000008396	yrdc	99	78.788	ENSSDUG00000009775	yrdc	99	78.788	Seriola_dumerili
ENSGAFG00000008396	yrdc	99	78.788	ENSSLDG00000003196	yrdc	99	78.788	Seriola_lalandi_dorsalis
ENSGAFG00000008396	yrdc	80	60.369	ENSSPUG00000003946	YRDC	84	60.369	Sphenodon_punctatus
ENSGAFG00000008396	yrdc	100	76.404	ENSSPAG00000012559	yrdc	100	76.404	Stegastes_partitus
ENSGAFG00000008396	yrdc	95	53.640	ENSSSCG00000040425	YRDC	92	53.640	Sus_scrofa
ENSGAFG00000008396	yrdc	53	65.753	ENSTGUG00000001507	YRDC	99	65.753	Taeniopygia_guttata
ENSGAFG00000008396	yrdc	94	69.412	ENSTRUG00000005923	yrdc	94	69.804	Takifugu_rubripes
ENSGAFG00000008396	yrdc	56	59.740	ENSTBEG00000008863	YRDC	98	59.740	Tupaia_belangeri
ENSGAFG00000008396	yrdc	51	64.539	ENSTTRG00000013538	-	95	64.539	Tursiops_truncatus
ENSGAFG00000008396	yrdc	73	60.804	ENSUAMG00000006150	YRDC	98	60.804	Ursus_americanus
ENSGAFG00000008396	yrdc	85	44.156	ENSVPAG00000006642	YRDC	97	44.156	Vicugna_pacos
ENSGAFG00000008396	yrdc	80	63.134	ENSXETG00000014420	yrdc	91	63.134	Xenopus_tropicalis
ENSGAFG00000008396	yrdc	89	94.538	ENSXCOG00000000829	yrdc	100	94.538	Xiphophorus_couchianus
ENSGAFG00000008396	yrdc	100	96.629	ENSXMAG00000014606	yrdc	95	96.629	Xiphophorus_maculatus