EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008505 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7760 bases
Position: chrNHOQ01000158.1:1686040-1693799
Accession: ZDB-GENE-040426-769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012583	U3_assoc_6	PF08640.11	8.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012714	-	1834	-	ENSGAFP00000012583	595 (aa)	-	UPI000DD25FCB

Gene Model

Click here to download ENSGAFG00000008505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008505	utp6	100	56.449	ENSG00000108651	UTP6	100	56.449	Homo_sapiens
ENSGAFG00000008505	utp6	100	88.067	ENSAPOG00000000435	utp6	100	88.067	Acanthochromis_polyacanthus
ENSGAFG00000008505	utp6	99	55.201	ENSAMEG00000005443	UTP6	99	55.201	Ailuropoda_melanoleuca
ENSGAFG00000008505	utp6	100	82.857	ENSACIG00000004124	utp6	100	82.857	Amphilophus_citrinellus
ENSGAFG00000008505	utp6	100	87.059	ENSAOCG00000016812	utp6	100	87.059	Amphiprion_ocellaris
ENSGAFG00000008505	utp6	100	87.059	ENSAPEG00000023565	utp6	100	87.059	Amphiprion_percula
ENSGAFG00000008505	utp6	100	88.739	ENSATEG00000003401	utp6	100	88.739	Anabas_testudineus
ENSGAFG00000008505	utp6	99	56.027	ENSAPLG00000005821	UTP6	99	56.027	Anas_platyrhynchos
ENSGAFG00000008505	utp6	100	57.956	ENSACAG00000009472	UTP6	100	57.956	Anolis_carolinensis
ENSGAFG00000008505	utp6	100	56.114	ENSANAG00000034603	UTP6	100	56.114	Aotus_nancymaae
ENSGAFG00000008505	utp6	100	86.555	ENSACLG00000006728	utp6	100	86.555	Astatotilapia_calliptera
ENSGAFG00000008505	utp6	100	72.437	ENSAMXG00000009478	utp6	100	72.437	Astyanax_mexicanus
ENSGAFG00000008505	utp6	100	53.010	ENSBTAG00000015612	UTP6	100	53.010	Bos_taurus
ENSGAFG00000008505	utp6	100	51.505	ENSBTAG00000003769	-	98	51.505	Bos_taurus
ENSGAFG00000008505	utp6	100	56.114	ENSCJAG00000014115	UTP6	100	56.114	Callithrix_jacchus
ENSGAFG00000008505	utp6	100	55.518	ENSCAFG00000018507	UTP6	100	55.518	Canis_familiaris
ENSGAFG00000008505	utp6	100	55.518	ENSCAFG00020014678	UTP6	100	55.518	Canis_lupus_dingo
ENSGAFG00000008505	utp6	100	52.833	ENSCHIG00000017954	-	100	52.833	Capra_hircus
ENSGAFG00000008505	utp6	100	52.833	ENSCHIG00000009726	-	100	52.833	Capra_hircus
ENSGAFG00000008505	utp6	99	50.334	ENSTSYG00000002202	UTP6	99	50.334	Carlito_syrichta
ENSGAFG00000008505	utp6	89	48.502	ENSCAPG00000017595	UTP6	97	48.315	Cavia_aperea
ENSGAFG00000008505	utp6	99	56.040	ENSCPOG00000014294	UTP6	100	56.040	Cavia_porcellus
ENSGAFG00000008505	utp6	100	51.759	ENSCCAG00000033318	-	100	51.759	Cebus_capucinus
ENSGAFG00000008505	utp6	100	55.518	ENSCATG00000034868	UTP6	100	55.518	Cercocebus_atys
ENSGAFG00000008505	utp6	99	56.376	ENSCLAG00000007274	UTP6	99	56.376	Chinchilla_lanigera
ENSGAFG00000008505	utp6	100	55.184	ENSCSAG00000006595	UTP6	100	55.184	Chlorocebus_sabaeus
ENSGAFG00000008505	utp6	73	47.101	ENSCHOG00000010940	-	73	47.101	Choloepus_hoffmanni
ENSGAFG00000008505	utp6	100	60.134	ENSCPBG00000004652	UTP6	100	60.134	Chrysemys_picta_bellii
ENSGAFG00000008505	utp6	99	31.382	ENSCING00000022947	-	99	31.382	Ciona_intestinalis
ENSGAFG00000008505	utp6	54	37.003	ENSCSAVG00000011416	-	99	37.003	Ciona_savignyi
ENSGAFG00000008505	utp6	87	39.847	ENSCANG00000031141	UTP6	89	39.847	Colobus_angolensis_palliatus
ENSGAFG00000008505	utp6	99	55.109	ENSCGRG00001000046	Utp6	100	55.109	Cricetulus_griseus_chok1gshd
ENSGAFG00000008505	utp6	95	53.887	ENSCGRG00000011543	Utp6	100	53.887	Cricetulus_griseus_crigri
ENSGAFG00000008505	utp6	100	75.839	ENSCSEG00000013422	utp6	100	91.667	Cynoglossus_semilaevis
ENSGAFG00000008505	utp6	100	91.092	ENSCVAG00000020322	utp6	100	91.092	Cyprinodon_variegatus
ENSGAFG00000008505	utp6	100	69.916	ENSDARG00000098433	utp6	100	79.006	Danio_rerio
ENSGAFG00000008505	utp6	100	55.853	ENSDNOG00000037018	UTP6	100	55.853	Dasypus_novemcinctus
ENSGAFG00000008505	utp6	95	54.513	ENSDORG00000003843	Utp6	99	57.169	Dipodomys_ordii
ENSGAFG00000008505	utp6	100	56.427	ENSEASG00005010870	UTP6	100	56.427	Equus_asinus_asinus
ENSGAFG00000008505	utp6	100	56.187	ENSECAG00000022217	UTP6	100	56.187	Equus_caballus
ENSGAFG00000008505	utp6	100	75.798	ENSELUG00000006618	utp6	100	75.798	Esox_lucius
ENSGAFG00000008505	utp6	100	54.167	ENSFCAG00000015795	UTP6	100	53.630	Felis_catus
ENSGAFG00000008505	utp6	100	59.129	ENSFALG00000002282	UTP6	100	59.129	Ficedula_albicollis
ENSGAFG00000008505	utp6	99	55.872	ENSFDAG00000019506	UTP6	100	55.872	Fukomys_damarensis
ENSGAFG00000008505	utp6	100	89.076	ENSFHEG00000010373	utp6	100	89.076	Fundulus_heteroclitus
ENSGAFG00000008505	utp6	100	75.126	ENSGMOG00000011958	utp6	100	75.126	Gadus_morhua
ENSGAFG00000008505	utp6	100	59.296	ENSGALG00000003260	UTP6	100	59.296	Gallus_gallus
ENSGAFG00000008505	utp6	100	85.378	ENSGACG00000019424	utp6	100	85.378	Gasterosteus_aculeatus
ENSGAFG00000008505	utp6	100	59.464	ENSGAGG00000004820	UTP6	100	59.464	Gopherus_agassizii
ENSGAFG00000008505	utp6	100	45.805	ENSGGOG00000026003	-	100	45.805	Gorilla_gorilla
ENSGAFG00000008505	utp6	100	56.784	ENSGGOG00000013569	UTP6	100	56.784	Gorilla_gorilla
ENSGAFG00000008505	utp6	100	86.555	ENSHBUG00000018668	utp6	100	86.555	Haplochromis_burtoni
ENSGAFG00000008505	utp6	99	52.108	ENSHGLG00000008642	-	99	52.108	Heterocephalus_glaber_female
ENSGAFG00000008505	utp6	99	55.872	ENSHGLG00000010332	UTP6	100	55.872	Heterocephalus_glaber_female
ENSGAFG00000008505	utp6	99	53.188	ENSHGLG00100014271	-	100	53.188	Heterocephalus_glaber_male
ENSGAFG00000008505	utp6	95	53.169	ENSHGLG00100006047	-	99	53.169	Heterocephalus_glaber_male
ENSGAFG00000008505	utp6	100	78.992	ENSHCOG00000017277	utp6	100	78.992	Hippocampus_comes
ENSGAFG00000008505	utp6	100	70.924	ENSIPUG00000022587	Utp6	100	70.924	Ictalurus_punctatus
ENSGAFG00000008505	utp6	99	57.191	ENSSTOG00000015875	UTP6	100	57.191	Ictidomys_tridecemlineatus
ENSGAFG00000008505	utp6	100	89.244	ENSKMAG00000021631	utp6	100	89.244	Kryptolebias_marmoratus
ENSGAFG00000008505	utp6	100	86.891	ENSLBEG00000002115	utp6	100	86.891	Labrus_bergylta
ENSGAFG00000008505	utp6	100	63.149	ENSLACG00000017158	UTP6	100	63.149	Latimeria_chalumnae
ENSGAFG00000008505	utp6	91	68.807	ENSLOCG00000013797	utp6	90	68.807	Lepisosteus_oculatus
ENSGAFG00000008505	utp6	100	55.760	ENSLAFG00000013008	UTP6	100	55.760	Loxodonta_africana
ENSGAFG00000008505	utp6	100	55.184	ENSMFAG00000038842	UTP6	100	55.184	Macaca_fascicularis
ENSGAFG00000008505	utp6	85	45.277	ENSMFAG00000041904	-	94	45.277	Macaca_fascicularis
ENSGAFG00000008505	utp6	100	55.184	ENSMMUG00000020403	UTP6	100	55.184	Macaca_mulatta
ENSGAFG00000008505	utp6	100	55.184	ENSMNEG00000039480	UTP6	100	55.184	Macaca_nemestrina
ENSGAFG00000008505	utp6	100	49.164	ENSMLEG00000032174	UTP6	100	48.997	Mandrillus_leucophaeus
ENSGAFG00000008505	utp6	100	43.645	ENSMLEG00000039364	-	100	43.311	Mandrillus_leucophaeus
ENSGAFG00000008505	utp6	100	87.059	ENSMAMG00000002228	utp6	99	87.059	Mastacembelus_armatus
ENSGAFG00000008505	utp6	100	86.555	ENSMZEG00005023895	utp6	100	86.555	Maylandia_zebra
ENSGAFG00000008505	utp6	95	57.570	ENSMGAG00000008111	UTP6	100	57.570	Meleagris_gallopavo
ENSGAFG00000008505	utp6	99	55.017	ENSMAUG00000021895	Utp6	100	55.017	Mesocricetus_auratus
ENSGAFG00000008505	utp6	100	54.758	ENSMICG00000002632	UTP6	100	54.758	Microcebus_murinus
ENSGAFG00000008505	utp6	99	55.017	ENSMOCG00000014163	Utp6	100	55.017	Microtus_ochrogaster
ENSGAFG00000008505	utp6	100	81.849	ENSMMOG00000008653	utp6	100	86.441	Mola_mola
ENSGAFG00000008505	utp6	100	57.903	ENSMODG00000019206	UTP6	100	57.903	Monodelphis_domestica
ENSGAFG00000008505	utp6	100	87.563	ENSMALG00000021112	utp6	100	87.563	Monopterus_albus
ENSGAFG00000008505	utp6	99	54.849	MGP_CAROLIEiJ_G0016828	Utp6	100	54.849	Mus_caroli
ENSGAFG00000008505	utp6	99	55.184	ENSMUSG00000035575	Utp6	100	55.184	Mus_musculus
ENSGAFG00000008505	utp6	99	51.505	MGP_PahariEiJ_G0017965	Utp6	100	51.338	Mus_pahari
ENSGAFG00000008505	utp6	99	54.682	MGP_SPRETEiJ_G0017672	Utp6	100	54.682	Mus_spretus
ENSGAFG00000008505	utp6	100	54.606	ENSMPUG00000014581	UTP6	100	54.606	Mustela_putorius_furo
ENSGAFG00000008505	utp6	100	56.093	ENSMLUG00000016422	UTP6	100	56.093	Myotis_lucifugus
ENSGAFG00000008505	utp6	99	56.522	ENSNGAG00000015482	Utp6	100	56.522	Nannospalax_galili
ENSGAFG00000008505	utp6	100	86.555	ENSNBRG00000019714	utp6	100	86.555	Neolamprologus_brichardi
ENSGAFG00000008505	utp6	100	55.779	ENSNLEG00000011009	UTP6	100	55.779	Nomascus_leucogenys
ENSGAFG00000008505	utp6	88	56.738	ENSOPRG00000008446	-	89	56.738	Ochotona_princeps
ENSGAFG00000008505	utp6	66	62.447	ENSODEG00000011971	UTP6	98	62.447	Octodon_degus
ENSGAFG00000008505	utp6	100	85.882	ENSONIG00000018090	utp6	100	85.882	Oreochromis_niloticus
ENSGAFG00000008505	utp6	98	56.973	ENSOANG00000004279	UTP6	99	56.973	Ornithorhynchus_anatinus
ENSGAFG00000008505	utp6	99	54.515	ENSOCUG00000016980	UTP6	99	54.515	Oryctolagus_cuniculus
ENSGAFG00000008505	utp6	99	84.512	ENSORLG00000003546	utp6	64	84.512	Oryzias_latipes
ENSGAFG00000008505	utp6	99	84.512	ENSORLG00020010377	utp6	99	84.512	Oryzias_latipes_hni
ENSGAFG00000008505	utp6	99	84.175	ENSORLG00015008893	utp6	99	84.175	Oryzias_latipes_hsok
ENSGAFG00000008505	utp6	100	84.538	ENSOMEG00000017487	utp6	100	84.538	Oryzias_melastigma
ENSGAFG00000008505	utp6	87	49.714	ENSOGAG00000004511	UTP6	100	49.524	Otolemur_garnettii
ENSGAFG00000008505	utp6	100	53.000	ENSOARG00000013474	UTP6	100	53.000	Ovis_aries
ENSGAFG00000008505	utp6	100	56.616	ENSPPAG00000038089	UTP6	100	56.616	Pan_paniscus
ENSGAFG00000008505	utp6	100	46.141	ENSPPAG00000016895	-	100	46.141	Pan_paniscus
ENSGAFG00000008505	utp6	100	56.427	ENSPPRG00000001010	UTP6	100	56.427	Panthera_pardus
ENSGAFG00000008505	utp6	100	56.594	ENSPTIG00000013913	UTP6	100	56.594	Panthera_tigris_altaica
ENSGAFG00000008505	utp6	100	46.309	ENSPTRG00000044798	-	100	46.309	Pan_troglodytes
ENSGAFG00000008505	utp6	100	56.616	ENSPTRG00000008977	UTP6	100	56.616	Pan_troglodytes
ENSGAFG00000008505	utp6	99	43.384	ENSPANG00000034274	-	100	43.049	Papio_anubis
ENSGAFG00000008505	utp6	100	53.088	ENSPANG00000023113	UTP6	100	53.088	Papio_anubis
ENSGAFG00000008505	utp6	100	70.401	ENSPKIG00000004653	utp6	100	70.401	Paramormyrops_kingsleyae
ENSGAFG00000008505	utp6	100	59.396	ENSPSIG00000012435	UTP6	100	59.396	Pelodiscus_sinensis
ENSGAFG00000008505	utp6	100	84.370	ENSPMGG00000009548	utp6	100	84.370	Periophthalmus_magnuspinnatus
ENSGAFG00000008505	utp6	99	54.682	ENSPEMG00000014081	Utp6	100	54.682	Peromyscus_maniculatus_bairdii
ENSGAFG00000008505	utp6	93	43.640	ENSPMAG00000009561	utp6	100	43.640	Petromyzon_marinus
ENSGAFG00000008505	utp6	100	60.134	ENSPCIG00000029968	UTP6	86	60.134	Phascolarctos_cinereus
ENSGAFG00000008505	utp6	100	95.630	ENSPFOG00000013918	utp6	100	95.630	Poecilia_formosa
ENSGAFG00000008505	utp6	100	95.462	ENSPLAG00000017825	utp6	100	95.462	Poecilia_latipinna
ENSGAFG00000008505	utp6	100	95.798	ENSPMEG00000008133	utp6	100	95.798	Poecilia_mexicana
ENSGAFG00000008505	utp6	100	93.445	ENSPREG00000013108	utp6	99	93.445	Poecilia_reticulata
ENSGAFG00000008505	utp6	100	53.769	ENSPPYG00000008154	UTP6	100	53.769	Pongo_abelii
ENSGAFG00000008505	utp6	100	54.925	ENSPCOG00000010224	UTP6	100	54.925	Propithecus_coquereli
ENSGAFG00000008505	utp6	100	52.421	ENSPVAG00000015759	UTP6	100	52.421	Pteropus_vampyrus
ENSGAFG00000008505	utp6	100	86.218	ENSPNYG00000002290	utp6	100	86.218	Pundamilia_nyererei
ENSGAFG00000008505	utp6	100	68.739	ENSPNAG00000027370	utp6	100	68.739	Pygocentrus_nattereri
ENSGAFG00000008505	utp6	99	54.348	ENSRNOG00000014209	Utp6	100	54.348	Rattus_norvegicus
ENSGAFG00000008505	utp6	100	55.017	ENSRBIG00000020822	UTP6	100	55.017	Rhinopithecus_bieti
ENSGAFG00000008505	utp6	100	55.017	ENSRROG00000036838	UTP6	100	55.017	Rhinopithecus_roxellana
ENSGAFG00000008505	utp6	100	70.736	ENSSFOG00015005978	utp6	100	70.736	Scleropages_formosus
ENSGAFG00000008505	utp6	100	88.739	ENSSMAG00000014772	utp6	100	88.739	Scophthalmus_maximus
ENSGAFG00000008505	utp6	100	89.076	ENSSDUG00000000329	utp6	100	89.076	Seriola_dumerili
ENSGAFG00000008505	utp6	100	87.899	ENSSLDG00000016724	utp6	100	87.899	Seriola_lalandi_dorsalis
ENSGAFG00000008505	utp6	99	49.161	ENSSARG00000010778	UTP6	99	49.161	Sorex_araneus
ENSGAFG00000008505	utp6	100	60.804	ENSSPUG00000005273	UTP6	100	60.804	Sphenodon_punctatus
ENSGAFG00000008505	utp6	100	86.218	ENSSPAG00000011871	utp6	99	86.218	Stegastes_partitus
ENSGAFG00000008505	utp6	100	56.594	ENSSSCG00000017745	UTP6	100	56.594	Sus_scrofa
ENSGAFG00000008505	utp6	100	58.961	ENSTGUG00000004999	UTP6	100	58.961	Taeniopygia_guttata
ENSGAFG00000008505	utp6	99	81.650	ENSTRUG00000012005	utp6	100	81.650	Takifugu_rubripes
ENSGAFG00000008505	utp6	99	80.976	ENSTNIG00000003235	utp6	100	80.976	Tetraodon_nigroviridis
ENSGAFG00000008505	utp6	67	57.459	ENSTBEG00000005388	-	67	57.459	Tupaia_belangeri
ENSGAFG00000008505	utp6	100	55.426	ENSTTRG00000009911	UTP6	100	55.426	Tursiops_truncatus
ENSGAFG00000008505	utp6	99	55.201	ENSUMAG00000015139	UTP6	99	55.201	Ursus_maritimus
ENSGAFG00000008505	utp6	100	55.426	ENSVPAG00000005782	UTP6	100	55.426	Vicugna_pacos
ENSGAFG00000008505	utp6	100	55.686	ENSVVUG00000012238	UTP6	100	55.686	Vulpes_vulpes
ENSGAFG00000008505	utp6	100	51.089	ENSXETG00000020057	utp6	100	51.089	Xenopus_tropicalis
ENSGAFG00000008505	utp6	100	96.482	ENSXCOG00000013626	utp6	100	97.297	Xiphophorus_couchianus
ENSGAFG00000008505	utp6	100	96.975	ENSXMAG00000017414	utp6	100	96.975	Xiphophorus_maculatus